Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq3626 129 5e-25
seq4182 122 8e-23
seq2492 114 1e-20
seq387 86.0 6e-12
>seq3626
Length=201135
Score = 129 bits (142), Expect = 5e-25
Identities = 175/242 (72%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || ||| |||| || || || |||||||| | |||||||||||||| |
Sbjct 59304 AAAAATTTGCATTCCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAAT 59245
Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885
||| ||||| | ||||| | ||| || |||||||| || | ||||| | ||
Sbjct 59244 GTTGTAATCAG--AGAGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGC 59187
Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945
|||||||| ||||| |||||||||||||| | |||||| || || || | | ||
Sbjct 59186 TGCTGATCGGGAGGGATACCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCAATTGTA 59127
Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005
|| | | || || || | || |||||||||||||| || || ||||| || ||||||
Sbjct 59126 TCCGATGGCTCAACCTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGC 59067
Query 95006 AT 95007
||
Sbjct 59066 AT 59065
Score = 129 bits (142), Expect = 5e-25
Identities = 160/217 (74%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851
|| || |||||||||||||| ||||||||||| | |||||| || | || ||| |
Sbjct 60191 CGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAG--AAAGGGTTCGCC 60134
Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| ||||| || ||||| ||||||| | || || || |||||||| || ||||| |
Sbjct 60133 CATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCT 60074
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | ||||| || ||||| | | ||||| | | || || || | || |
Sbjct 60073 TGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCTAATGTAA 60014
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| |||||||||||||| || ||||||||||||||
Sbjct 60013 TGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| || |||| || | ||| | ||| || || ||||| | ||| || || |
Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
| | ||| | ||| |||| |||||||| ||||||| | || || || |||||||
Sbjct 59687 A--GGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAG 59630
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| || ||||| ||||| | ||||| || ||||| | | ||||| | | || |
Sbjct 59629 GGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAA 59570
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | || ||||| |||||||||||||| || ||||||||||||||
Sbjct 59569 CTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| ||||| |||||||| ||||||| | || || || |||||||| || ||||| ||
Sbjct 59904 ATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTT 59845
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||||| || ||||| | | ||||| | | || || || | || ||
Sbjct 59844 GTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAAT 59785
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||||||||| || ||||||||||||||
Sbjct 59784 AGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||||||||||||| |||| || | | |||||| || ||||| || |||||||||
Sbjct 59447 TCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTG 59388
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||||| ||||| ||| ||| ||| || | | || || || | || ||
Sbjct 59387 TCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATC 59328
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || |||||||| ||||| || |||||
Sbjct 59327 GTCTTACCTGTGAGAGTTTTAACAAAAATTTGCAT 59293
>seq4182
Length=188933
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|||||||| || | |||||| | || || ||||| ||||| || | || || |||
Sbjct 74272 CCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGAT 74331
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| ||||||||||| || ||||||| || | ||||||||| || |||
Sbjct 74332 AATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGA 74391
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||||||||| || | |||||| || || || | | ||| || | || ||
Sbjct 74392 ATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCACC 74451
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||||||||| || ||||| ||||| || || ||||||||
Sbjct 74452 TCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCAT 74498
>seq2492
Length=83244
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| || ||||| || | || ||||| ||||| | || || ||
Sbjct 40774 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCG-- 40831
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
| ||||| || ||| || ||||| |||||| ||||||| | || ||||| ||||| |
Sbjct 40832 AGAGTGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 40891
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| ||||| |||||||| | ||||| ||||| || | | |||||| | | || |
Sbjct 40892 GGATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAA 40951
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| |||| ||||||||||| ||||| | || || || || ||||||||
Sbjct 40952 CTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| || ||||| || | || ||||| ||||| | || || || |
Sbjct 41002 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTC--TG 41059
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
| ||||| || ||| || ||||| || ||| ||||||| | || ||||| ||||| |
Sbjct 41060 AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 41119
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| ||||| |||||||| | ||||| ||||| || | | |||||| | | || |
Sbjct 41120 GGATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAA 41179
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| |||| ||||||||||| ||||| | || || || || ||||||||
Sbjct 41180 CTTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228
Score = 109 bits (120), Expect = 5e-19
Identities = 170/241 (71%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||||||||| || ||||| || | || ||||| || || |
Sbjct 40306 AAAATTTGCATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATA 40365
Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|| || || | ||||| || ||| || ||||| || ||| ||||||| | || |
Sbjct 40366 TTGTAGTCCG--AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCT 40423
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
|||| ||||| || ||||| |||||||| | ||||| ||||| || | | |||||
Sbjct 40424 GCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGT 40483
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | | || || |||| ||||||||||| ||||| | || || || || |||||||
Sbjct 40484 CTGATGGCTCAACTTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAAATCTGCA 40543
Query 95007 T 95007
|
Sbjct 40544 T 40544
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| || ||||| || | || ||||| ||||| | || || ||
Sbjct 40546 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40605
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || ||||| || ||| ||||||| | || ||||| ||||| ||
Sbjct 40606 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40665
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| |||||||| | ||||| ||||| || | | |||||| | | || ||
Sbjct 40666 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAACT 40725
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||||||||| ||||| | || || || || ||||||||
Sbjct 40726 TCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772
Score = 100 bits (110), Expect = 3e-16
Identities = 166/240 (69%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || |||||||||| || ||||| || | || ||||| || || |
Sbjct 41445 AAAAATCTGCATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGAT 41504
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| || || | ||| | ||| || ||||| || ||| ||||||| | || ||
Sbjct 41505 ATTGTAGTCCGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTG 41564
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||| ||||| || ||||| |||||||| | |||||| || || || | | |||||
Sbjct 41565 CTGGTCTGGTGGGATACCCTCTTTGTCTTGAATTTTGGCTTTAACATTTTCAATGGTGTC 41624
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || |||| ||||||||||| ||||| | || || || || ||||||||
Sbjct 41625 TGATGGCTCAACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATCTGCAT 41684
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||||| || || || || | ||| ||||| ||||| | || || ||
Sbjct 40090 CCACCCCTCAATCTCAGTACTAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCCG-- 40147
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||||||| | ||| || ||||| || ||| ||||||| | || ||||| ||||| |
Sbjct 40148 ATAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 40207
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| ||||| |||||||| | ||||| ||||| || | | ||||| | | || |
Sbjct 40208 GGATACCCTCTTTGTCTTGGATTTTAGCCTTAACATTTTCTATGGTGTCTGATGGCTCAA 40267
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| |||| ||||||||||| ||||| | || || || || || |||||
Sbjct 40268 CTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATTTGCAT 40316
>seq387
Length=840652
Score = 86.0 bits (94), Expect = 6e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 94883 CTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACA 94942
|| |||||||||||||| || || || || || | ||| || || ||||| | |
Sbjct 551546 CTCTGCTGATCTGGAGGGATTCCCTCCTTATCTTGAATCTTAGCTTTGACATTTTCAATT 551487
Query 94943 GTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATC 95002
||||| | | | ||||| |||| |||||||| || || ||||| || ||||||||||||
Sbjct 551486 GTGTCCGAGGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTCACAAAGATC 551427
Query 95003 TGCAT 95007
|||||
Sbjct 551426 TGCAT 551422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448065042693240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |