Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_006634.1
Length=14975
Score E
Sequences producing significant alignments: (Bits) Value
seq1261 500 8e-138
seq3261 268 9e-68
seq8078 253 2e-63
SEQ20740 217 1e-52
seq600 122 8e-24
SEQ34874 80.6 3e-11
>seq1261
Length=157084
Score = 500 bits (554), Expect = 8e-138
Identities = 478/617 (77%), Gaps = 71/617 (12%)
Strand=Plus/Plus
Query 14023 AGGTTGAAGATCACACAAACAACCTAATAAAAATTTTAATTGACTTGGCGACAGTTTCGA 14082
||||| |||||||||||||||| ||||||||||||| | || || | |||
Sbjct 100342 AGGTTAAAGATCACACAAACAAACTAATAAAAATTTCGAGA-ACATG-----ATTTT--- 100392
Query 14083 GAACACGTGA-CGAGTTTTAAGTTCTGACGTAAACGTCGTGTGTCAG---ATAATCAATA 14138
| ||| || |||| |||||| |||||||| |||||||||||| | ||||||| ||
Sbjct 100393 --AAACGAGAACGAGCTTTAAGATCTGACGTTAACGTCGTGTGTAGGTATATAATCAGTA 100450
Query 14139 GTATAAAACGGACGATTGAGATCGAGGGCTTCAGTGTTCATCGAACATCGGTGCGATCAT 14198
|||| |||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||
Sbjct 100451 GTATGAAACGGACGATTGACATCGAGGACTTCAGTGTTCATAGAACATCTGTGCGATCAT 100510
Query 14199 GTTATTTAGCAAAGCTA----------------CT-----GCAGTAATACTCTTCGCTCT 14237
|| | ||||||||||| || | | ||||||||||||||||
Sbjct 100511 GTCACGTAGCAAAGCTAAGTAAGTAATAAGTAACTCATAAGTAATAATACTCTTCGCTCT 100570
Query 14238 TATCGGGACCTCTTGTAAGTAAAATAATTTTCTATTTTATTTTCTTCAATGTTAATATAT 14297
||||||||||||||||||||||||||||||||||||| |||||||| |||| || | |
Sbjct 100571 TATCGGGACCTCTTGTAAGTAAAATAATTTTCTATTTCATTTTCTTTAATG---ATGTTT 100627
Query 14298 GTATATTACGCAGGACCGCTCATAGttttttttttAAGGTATTGAGGCATGGCAGGATAG 14357
|||||||||||| | | |||||||||||||| ||||||| ||||||||| |||||
Sbjct 100628 -TATATTACGCAGAATCACTCATAGTTTTTTT----AGGTATTCAGGCATGGCGGGATAT 100682
Query 14358 ATACAGAGAGATTGGTGGATTATTTGACAATGATGACCTGCAGGACATCTTGAACGCCAA 14417
| |||| || |||| |||||||||||| | ||||||||||| ||| |||| ||||||||
Sbjct 100683 AGACAGTGATATTGATGGATTATTTGATAGTGATGACCTGCGGGATATCTCCAACGCCAA 100742
Query 14418 CCCGTCGATGCCGGATACCATAACTGTACaaaaaaaTAATGTTTATAACACTCGTCCAAA 14477
| |||||||||| || || |||| ||||||||| ||||||||||||||| |||||
Sbjct 100743 CGCGTCGATGCCAGAGGCCCCAACTATACAAAAAACTAATGTTTATAACACCTATCCAAG 100802
Query 14478 CAACAACGCCATCTATGGATCAATAGTAAAGCAAACGGAACGAGTATATTTACCAGACGA 14537
|||||||| | |||||||||||||||||||| ||
Sbjct 100803 CAACAACGAC---------------------------GAACGAGTATATTTACCAGAAGA 100835
Query 14538 CCTCAGTAAGCCATTCAGGGTGCGATCGACTACGCGGGTAGAGCCAGGTGGTCCGAACGG 14597
||||| ||||| |||||||| ||||||||||||| ||| | |||||||||||||||| ||
Sbjct 100836 CCTCAATAAGCTATTCAGGGAGCGATCGACTACGTGGGCAAAGCCAGGTGGTCCGAATGG 100895
Query 14598 AAATCAAATTTACTACT 14614
||||||| |||||||||
Sbjct 100896 AAATCAAGTTTACTACT 100912
Score = 426 bits (472), Expect = 1e-115
Identities = 369/453 (81%), Gaps = 33/453 (7%)
Strand=Plus/Plus
Query 1530 CACACAGTCTA--ATAAACATATGTGTATAAATGTATG-----------ATTGATTACAA 1576
|||| |||||| |||||||| |||||||||||||||| |||||||| ||
Sbjct 102860 CACATAGTCTATAATAAACATCTGTGTATAAATGTATGTGAATGTATGTATTGATTATAA 102919
Query 1577 TGGTGAAAACCAATATANNNNNNTAATCCAGTACATGAACTCGTATC---GTGGTTTTGC 1633
||||||| ||||||| | |||||||| || |||||||| | ||||||||||
Sbjct 102920 AGGTGAAA-CCAATAT----GTATGATCCAGTATATAAACTCGTACCTATGTGGTTTTGC 102974
Query 1634 TGAGTAGCCCAGAGAGCTGCGGGTAACCTGCGTAATATCAGAAGAGCGTAGTCACCAAGA 1693
|||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||| ||||
Sbjct 102975 TGAGTAGCCCAGAGAGCTACGGATAACCTGAGTAATATCAGAAGAGCGCAGTCACTAAGA 103034
Query 1694 ACAACTGAAT-----CTGGATGCTCGCTAATAGGAGGACATCTGCGAAACACCGTCTTTG 1748
|||| |||| |||||| ||||||||||||||||||| |||||||||| |||||||
Sbjct 103035 TCAACCGAATCTGAACTGGATACTCGCTAATAGGAGGACATTTGCGAAACACTGTCTTTG 103094
Query 1749 CCCCCGAATTTTTTGGAGTACTT-ACACAAAGTCAAAATGAAAGTATCCTTCGGCTATGG 1807
|||| ||||||| || ||||| || |||||||||||||||||| ||||| |||||
Sbjct 103095 TCCCCTAATTTTTCAGATTACTTGTCATTGAGTCAAAATGAAAGTATCTTTCGGGTATGG 103154
Query 1808 ACTCGACTTTTGTCCATGCGCATAATAGA-TATTCGCTAAAAATCAGAGTAAATTCTTTG 1866
|||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| ||
Sbjct 103155 ACTCGATTTTTGTCCATGCGCATAATAGATTATTCGCTAAAAATCAGAGTATATTTGTTC 103214
Query 1867 GA-TA----CACCAACTTCACGGAAGAATAGTTAAGTCTGAGATGTTGAGTACTAGAATA 1921
|| || || |||||||||||||||| || ||||||| |||||||| || ||||
Sbjct 103215 GAGTAAAATCATTCACTTCACGGAAGAATACTTTTGTCTGAGGTGTTGAGTGCTTTAATA 103274
Query 1922 AAAATCAGTTTTTGACTTAACTAAAGAGCTTAT 1954
|||||||||||||| || | ||||||||| |||
Sbjct 103275 AAAATCAGTTTTTGGCTCACCTAAAGAGCGTAT 103307
Score = 389 bits (430), Expect = 4e-104
Identities = 285/325 (88%), Gaps = 6/325 (2%)
Strand=Plus/Plus
Query 2124 GTATAGAATATGACCAAATAAAGCTAAAAATTTGATTTTGACTTGGAGATCAGTTGCTAA 2183
|||||||| |||||||||| ||||||||| |||||||| || |||| |||||||||||||
Sbjct 103371 GTATAGAACATGACCAAATGAAGCTAAAA-TTTGATTTCGATTTGGTGATCAGTTGCTAA 103429
Query 2184 GCTGAAACAGTAGTAGATGAGGCCCATATAGGTTTGGACTTGTAAACCTGATTAGGTACC 2243
|||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||
Sbjct 103430 GCTGAAACAGTAGTAGATAAGGCCCATATAGATTTGGACTTGTAAACCTGAT-AGGTACC 103488
Query 2244 TACTGCCACTAAAGTCAGCAACGACCTCTTGGAAAGTAGATATGGTCACGTGTCAATTCT 2303
|||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 103489 TACTGCCACTAAAGCTGGCAACGACCTCATGGAAAGTAGGTATGGTCACGTGTCAATTCT 103548
Query 2304 CGAGAATTCGAACATTACACACAAAACCAGTTTTTACTGAGAAATATTGGTCTGCATAGC 2363
|||||||| || ||||||||||||||| | || || | || |||| |||||||||||
Sbjct 103549 AGAGAATTCAAAAATTACACACAAAACC-GGTTATAATCAGGAATACAAGTCTGCATAGC 103607
Query 2364 GATTAACAACTGGTCACGTTGCGTGACCATTCTAGTTGAACTCAGTGGCTTCTTTAGGTA 2423
|||| ||||||||||| ||| ||||||||||||||| || | ||||||||||||| |
Sbjct 103608 GATT-GGAACTGGTCACGCTGC--GACCATTCTAGTTGACCTTATTGGCTTCTTTAGGCA 103664
Query 2424 AGAAGAGAGGGGGGTGTGAAATGCC 2448
|||||| ||||||||| ||| |||
Sbjct 103665 AGAAGAAAGGGGGGTGCAAAACGCC 103689
Score = 161 bits (178), Expect = 9e-36
Identities = 126/149 (85%), Gaps = 1/149 (1%)
Strand=Plus/Plus
Query 4370 TGATAAGCCATTTATGTATTTATGGATAGCGGCAAGTATCTTAATTAGCCTGACTATTAA 4429
|||||| | ||| ||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct 103725 TGATAAATAAATTACGTATTCATGGATAGCGGCAAGTATCTTAATTAGCCTCACTTTTAA 103784
Query 4430 ATTTTTACGACCTAAACCACAAGGAGACC-TTCAGATAACTTTAAGTTATGCATATTTTT 4488
||||| | ||||||||| | |||| |||| || |||||||||||||| ||| |||||
Sbjct 103785 ATTTTGATGACCTAAACTAGAAGGGGACCTTTAAGATAACTTTAAGTACTGCTGATTTTC 103844
Query 4489 CTCTCTTTTATTGACTAGTTTCAGGAAAC 4517
|||||| ||| |||||||||||||||||
Sbjct 103845 TTCTCTTCTATCGACTAGTTTCAGGAAAC 103873
>seq3261
Length=19281
Score = 268 bits (296), Expect = 9e-68
Identities = 253/329 (77%), Gaps = 25/329 (8%)
Strand=Plus/Plus
Query 13347 TACAAGTAATGTGGATCGTGTTCATGATCGATGCGTAATAAACAAAGTTT-TTTATCAAA 13405
||||||||||||| ||||||| ||||||||||||||||| || |||| ||||||| |
Sbjct 242 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAAT---TAATGTTTATTTATCACA 298
Query 13406 TTTACTGCAAATTATTAATTATCAATATACGCTGATGGGAAGatttattaactattaaca 13465
|||| ||| ||| ||||||| | ||||| ||||| | |||||||||||||||||||||
Sbjct 299 TTTA---CAACTTAATAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACA 355
Query 13466 aattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNN 13525
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 356 AATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACA 415
Query 13526 NNNNNNNNNNNNNNNNNTGGGAGGAAAGTATATT--TAGTAAAATAGTTTATAAGTATTT 13583
| | | |||| |||||| |||||||| |||||||||||||||
Sbjct 416 TTCAATAAATATTCATTTTGTA-GAAAATATATTTATAGTAAAACAGTTTATAAGTATTT 474
Query 13584 ATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTTTTTATGTCTG 13643
|||||||||||||||||||||| ||||||||||||| || ||| ||
Sbjct 475 ATTAATAGTTAACAAATATAGT--------------TATAATAAAATCTATTAATGGATG 520
Query 13644 AtttttttttCAACCCATATATAGTTATA 13672
| ||||||||||||||| |||||| ||||
Sbjct 521 A-TTTTTTTTCAACCCAGATATAGGTATA 548
Score = 93.3 bits (102), Expect = 4e-15
Identities = 76/91 (84%), Gaps = 1/91 (1%)
Strand=Plus/Plus
Query 13166 TCGGCGCGCACGGGAACCGAACCTGGGACCTGACGCTTGAGAAACTAATTCATTACCTGT 13225
|||||| || | ||||||||||||||||||| || ||||| | |||||||| |||||| |
Sbjct 129 TCGGCGTGCGCAGGAACCGAACCTGGGACCTAACACTTGAAAGACTAATTCCTTACCTCT 188
Query 13226 TTACCAACGAGACTTGCTTG-AAAGAAGAGT 13255
|||||||||| ||| | || |||| |||||
Sbjct 189 TTACCAACGAAGCTTCCATGAAAAGCAGAGT 219
>seq8078
Length=15557
Score = 253 bits (280), Expect = 2e-63
Identities = 199/246 (81%), Gaps = 5/246 (2%)
Strand=Plus/Minus
Query 13347 TACAAGTAATGTGGATCGTGTTCATGATCGATGCGTAATAAACAAAGTTTTTTATCAAAT 13406
||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 3935 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATTAACAAAGTTTTTTATCAAAT 3876
Query 13407 TTACTGCAAATTATTAATTATCAATATACGCTGATGGGAAGatttattaactattaacaa 13466
|| |||| ||||||||||| | ||||| ||||| | ||||||||||||||||||||||
Sbjct 3875 TT---GCAACTTATTAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACAA 3819
Query 13467 attaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNNN 13526
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3818 ATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACAT 3759
Query 13527 NNNNNNNNNNNNNNNNTGGGAGGAAAGT--ATATTTAGTAAAATAGTTTATAAGTATTTA 13584
| |||| ||||| || | |||||||||||||||||||||||||
Sbjct 3758 TCAATAAATATTCATTTTGGAGAAAAGTTCATTTGTAGTAAAATAGTTTATAAGTATTTA 3699
Query 13585 TTAATA 13590
||||||
Sbjct 3698 TTAATA 3693
Score = 118 bits (130), Expect = 1e-22
Identities = 78/85 (92%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 13588 ATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTTTTTATGTCTGAttt 13647
|||||||||||||||||||||||||||||||||||||||||| || || ||| ||| ||
Sbjct 629 ATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAAGCTATTAATGGATGA-TT 571
Query 13648 ttttttCAACCCATATATAGTTATA 13672
||||||||||||| |||||||||||
Sbjct 570 TTTTTTCAACCCAGATATAGTTATA 546
Score = 78.8 bits (86), Expect = 9e-11
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 13292 GCAGATCTGGCCAGATCTGTTTATATATGGCCAGATCTAATCTATTTTTCCCGGGT 13347
||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||
Sbjct 4202 GCAGATCTGACCAGATCGGTTTATGTATGGCCAGATCTAATCCGTTTTTCCCGGGT 4257
>SEQ20740
Length=2826
Score = 217 bits (240), Expect = 1e-52
Identities = 174/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 13459 attaacaaattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNN 13518
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2325 ATTAACAAATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAGATATTT 2266
Query 13519 NNNNNNNNNNNNNNNNNNNNNNNNTGGGAGGAAAGTATATT-----TAGTAAAATAGTTT 13573
| |||| |||||||||| ||||||||||||||
Sbjct 2265 GTTAACATTCAATAAATATTCATTTTGGAGAAAAGTATATTATTATTAGTAAAATAGTTT 2206
Query 13574 ATAAGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTT 13633
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205 ATAGGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTA 2146
Query 13634 TTTATGTCTGAtttttttttCAACCCATATATAGTTATA 13672
|| ||| |||| |||||||||||||| |||| ||||||
Sbjct 2145 TTAATGGATGATATTTTTTTCAACCCAGATATGGTTATA 2107
>seq600
Length=1111
Score = 122 bits (134), Expect = 8e-24
Identities = 85/93 (91%), Gaps = 4/93 (4%)
Strand=Plus/Minus
Query 13546 GAGGAAAGTATATTTA--GTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 13603
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 GAGAAAAGTATATTTATAGTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 508
Query 13604 GTTAT-ATCTGGCCAGATATAATAAAATCTTTT 13635
||||| || | |||||||||||||||||| ||
Sbjct 507 GTTATTATATA-CCAGATATAATAAAATCTATT 476
>SEQ34874
Length=1816
Score = 80.6 bits (88), Expect = 3e-11
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 13388 ACAAAGTTTTTTATCAAATTTACTGCAAATTATTAATTATCAATATACGCTGATGGGAAG 13447
|||| ||||||||||||||| |||| ||||||||||| | ||||| ||||| | |||
Sbjct 1527 ACAACGTTTTTTATCAAATTC---GCAACTTATTAATTATTACTATACTCTGATAGAAAG 1583
Query 13448 atttattaactatta 13462
|||||||||||| ||
Sbjct 1584 ATTTATTAACTACTA 1598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47779293338546
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