Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_006644.1
Length=16103
Score E
Sequences producing significant alignments: (Bits) Value
seq2955 1031 0.0
seq4013 159 4e-35
seq99 129 6e-26
seq2222 82.4 8e-12
>seq2955
Length=45615
Score = 1031 bits (1142), Expect = 0.0
Identities = 713/812 (88%), Gaps = 44/812 (5%)
Strand=Plus/Plus
Query 3423 TTAAGTCTGTTGTTTCTTTTGATACGCTGATCTTTAATAGATAATGTATGCTAATGATGT 3482
|||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||
Sbjct 13837 TTAAGTCTGTTGTTTCTTTT-ATACGCTGACCTTTAAGAGATAATGTATGCTAATGATGT 13895
Query 3483 CACCCTGTGAGGCACATGAAGCGATAGCGGAACTGAACACTACGCTTTTGATTAGAAACA 3542
|| ||||| ||| |||||||||||||| |||||| || ||||||||||||||||||||||
Sbjct 13896 CATCCTGTAAGGTACATGAAGCGATAGTGGAACTAAATACTACGCTTTTGATTAGAAACA 13955
Query 3543 TCGATTATTGTTTTCAAGTTGACAGGGATAGCAATTATTCATCAAGAATTTTCCATTGAT 3602
||||||||||||||| |||||||||||||||||||||||||| |||||||| | ||| |
Sbjct 13956 TCGATTATTGTTTTCGAGTTGACAGGGATAGCAATTATTCATTAAGAATTTCCTATTAAC 14015
Query 3603 TGTTCCTCTTTTCAAATGATGCGCA---TGTGTATTTTTGATTACTGTACACCAAAAAA- 3658
|||| || |||| |||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 14016 TGTTACTTTTTTTAAATGATGCGCACCATGTGTATTTTTGATTACTGTACACGAAAAAAA 14075
Query 3659 TAGAAATTTTTGCCATTTTTCTATAAGAGATATTTATATGTTGGTAAGAAAAATTTAATT 3718
|| ||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct 14076 TATAAATTTTTGCCATTTTTCTTTATGAGATATTTATATGTTGGTAAGAAAAATTTAACT 14135
Query 3719 ATGTATATAGTCAATTTTGCTAGATCAGCATAGAAATTATCCCTCTGTAAAAGTGGTAAA 3778
||||| ||||||||||||||||||||||||||| || | || |||||||||| ||||
Sbjct 14136 ATGTAGATAGTCAATTTTGCTAGATCAGCATAGCAACTGTCG---TGTAAAAGTGTTAAA 14192
Query 3779 AATTTTGAATGTAtttttttCCGTTGTTCGAAAATCAATCTCATATAGACCATTATTATT 3838
|||||||||||||||||||| ||||||||||||||||||||| || ||| |||||||
Sbjct 14193 AATTTTGAATGTATTTTTTTTCGTTGTTCGAAAATCAATCTCCTAAAGATTATTATTACC 14252
Query 3839 GGCGTCATTAATGTAATGCCTTTTATACAAAACCCTGTCAACTTTCGCTTATTTATTTCG 3898
||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||
Sbjct 14253 GGCGTCATTAATGTAGTCCCTTTTATACAAAACCCTGTCAACTTTCACTTATTT---TCG 14309
Query 3899 CTTACTCTGATTTTAGTCATGATGTTATTTAGTTAATTATAAGCCAGAACAATAAAGTAC 3958
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 14310 CTTACTCTGATTTTAGTCATGGTGTTATTTAGTTAATTATAAGCCAGAACAATAAAGTAC 14369
Query 3959 AAAAATCGATGTATTGAATTGCGGTTCTCAGAGATGATCACAATCACAGAGTAAAATCGT 4018
|||||||||||||||||| |||| |||||||||||| |||||| ||| ||||||||||||
Sbjct 14370 AAAAATCGATGTATTGAAATGCGATTCTCAGAGATGTTCACAAGCACTGAGTAAAATCGT 14429
Query 4019 AACATTTTAGTTTTAAAGCTTGACAATTTTTCGGTATGTATTTTATGAGATTACATAGAA 4078
||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct 14430 AACATATTAGTTTTAAAGGTTGACAATTTTTGGGTATACATTTTATGAGATTACATAGAG 14489
Query 4079 CCATCAGTTTTGGATACTAGCTTTCCATTAAGATAATAACTTGTTGAGTACTAAGTAAGG 4138
||||||||||||||||||||||||||||||| |||||||||
Sbjct 14490 CCATCAGTTTTGGATACTAGCTTTCCATTAAAATAATAACT------------------- 14530
Query 4139 TCACAATTGTTCCGTACGTTTCTAAAGATACTTCAATTCATTCATAGTAAAACTGGTCCT 4198
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 14531 --------------TACGTTTCTAAAGATACTTTAATTCATTCATAGTAAAACTGGTCCT 14576
Query 4199 TGTATACGACAAATTTTTGTAAAACGAGTTTA 4230
||||||||| | |||||| |||||||||||||
Sbjct 14577 TGTATACGAGACATTTTTCTAAAACGAGTTTA 14608
Score = 506 bits (560), Expect = 2e-139
Identities = 331/362 (91%), Gaps = 6/362 (2%)
Strand=Plus/Plus
Query 7856 GACCAGTTGGAAGATATTATTTACGAGATAATCGATGAAT-TTGGAGATGTTATAATACG 7914
||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||
Sbjct 14924 GACTAGTTGGAAGATATTATTTACAAGAGAATCGATGAATGTTGGAGATGTTATAATACG 14983
Query 7915 CTGGGTGGAATAATATTTTCAATAAGTGGTGTAAAAACCATGATAGCTAATTATAAAAGT 7974
|||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||
Sbjct 14984 CTGGGTGGAATAATATTTACAATAAGAGGTGTAGAAACCATGATAGCTAATTATAAAAGT 15043
Query 7975 CAATTTTGGTTTCGTCGAATCAATGATGTCCAGAGCGAGCCTAACAGACATTACTTCATG 8034
|||||||||||||||| || |||| ||| |||| ||||||||||||| ||||| |||||
Sbjct 15044 CAATTTTGGTTTCGTCAAAACAATCATGCTCAGAACGAGCCTAACAGAAATTACCTCATG 15103
Query 8035 CTGTATTTGAATTGGAAAATAATATAGACTCATGAGTGTAATTATACTTTGCAGTG---A 8091
||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||| |
Sbjct 15104 CTGTATTTGAATTGGGAAATAATATAGACTCATGA--GTAATTGTACTTTGTAGTGAGAA 15161
Query 8092 GAAGTTATATTTTTTGCGAAAAAGAAGAGTTATTTTTACTGATGATTTTATACTAATACT 8151
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 15162 GAAGTTAATTTTTTTGCGAAAAAGAAAAGTTATTTTTACTGATGATTTTATACTAATACT 15221
Query 8152 GAGAGCTCAGGACACTGTTATCAAGTGTTATTGAAAATCCTACTAAATTGAAATAAACTA 8211
|||| |||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||
Sbjct 15222 GAGAACTCAGGACACTGTTATGAAGTGTTATTGAAAACCCTACTACATTGAAATCAACTA 15281
Query 8212 TG 8213
||
Sbjct 15282 TG 15283
Score = 291 bits (322), Expect = 8e-75
Identities = 185/201 (92%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 3227 TATATATTGTAAAAATAATAAGTGaaaaaaaCTTCTTAATTTAAAACGTACGTACTTATT 3286
|| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 12990 TAGATATTGTAAAAATAAAAAGTGAAAAAATCTTCTTAATTTAAAACGTACGTACTTATT 13049
Query 3287 TTCATTTAAAAAATCTATGTACCAACCTCTTTGTAAATATTCACTCAGCCCAATACAATA 3346
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||| || |
Sbjct 13050 TTCATTTATAAAATCTATGTACTTACCTCTTTGTAAATATTCACTCAGCCCAATATAAAA 13109
Query 3347 ATAATGAATTTTCACACAATAGACGTCTAAACACTATCGGAACGAGCACGGAACTAGCAT 3406
||||||||||| |||||||||||||| |||||||| |||||||| || |||||||||||
Sbjct 13110 ATAATGAATTTGCACACAATAGACGTTTAAACACTGTCGGAACGGTCATGGAACTAGCAT 13169
Query 3407 TGATTTAATTCAATGTTTAAG 3427
||||||| ||| |||||||||
Sbjct 13170 TGATTTATTTCGATGTTTAAG 13190
Score = 244 bits (270), Expect = 1e-60
Identities = 221/288 (77%), Gaps = 50/288 (17%)
Strand=Plus/Plus
Query 15399 CCAGTAACGCTTTTGAAATCGAAAACTAAGGGACATTAACTATTGTGGTCCATGAATAAT 15458
||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 7619 CCAGTAATGCTTTTGAAATCGAAATTTAAGGGACATTAACTATTGTGGTCCAT------- 7671
Query 15459 TCCTTTTCTACAGTAATTGTTGTAATGGTTTCAGATTGGGGTATTCAATATATTGTTATA 15518
|| ||||||||||||||||| |
Sbjct 7672 -------------------------TG---------TGGGGTATTCAATATAT------A 7691
Query 15519 AATAAAACATTGTTCAtttttttAATTCATTATTTAAAAAGCTATAACTTCAAAAAATTC 15578
|||||||| ||||| ||||||| |||||||||||| ||||| | ||||| |||||||||
Sbjct 7692 AATAAAACTTTGTTAATTTTTTAAATTCATTATTTGAAAAGTCACAACTTTAAAAAATTC 7751
Query 15579 ATTAACAACTAATTAACTCTTTACACATGTCTTATACATAATTGAAAACTTATTATAATT 15638
|| ||| ||||||| ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 7752 ATAAAC---TAATTAAATCTTTACACATATCTTATACATAATTGAAAACTTATTACAATT 7808
Query 15639 CATTGCATAAGAAACTATGACAGTCATTAATATTCTATTTACGTAGAG 15686
|| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 7809 CACTGCATAAGAAACTATGACAGTCATTGATATTCTATTTACGTAGAG 7856
>seq4013
Length=136960
Score = 159 bits (176), Expect = 4e-35
Identities = 112/128 (88%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 2020 AGTCCTGTTAAAAAACTTGGTATTCTCAGATTTAAAATACCAGTTTTCTTAAATCTAAAA 2079
||| | | ||||||||||||||||||||| ||||||||| |||| |||||||||||||||
Sbjct 31625 AGTTCCGCTAAAAAACTTGGTATTCTCAGGTTTAAAATATCAGTATTCTTAAATCTAAAA 31684
Query 2080 TATTTAACTTGACTTTTACTGCGTACAAGAAAACTCGACTAAAAAATATTCAGTATTCCG 2139
|||||| |||||||||| |||||||| ||| |||| |||||||| ||||| ||||||
Sbjct 31685 TATTTATCTTGACTTTTGGTGCGTACAGGAATACTCAACTAAAAATTATTCTGTATTCTC 31744
Query 2140 GGTATAAA 2147
||||||||
Sbjct 31745 GGTATAAA 31752
>seq99
Length=207983
Score = 129 bits (142), Expect = 6e-26
Identities = 108/132 (82%), Gaps = 8/132 (6%)
Strand=Plus/Plus
Query 193 TTAATAAACattatatttgaattataaattttaagataattggttttttgagaacatttt 252
||||||| || || ||||||| ||||||||||| ||||||||||| | |||||
Sbjct 140698 TTAATAATTATAATTTTTGAATAATAAATTTTAAAATAATTGGTTTGT-GAGAA------ 140750
Query 253 atttttttaattaGAATAAAATTGTAAGTATCAAACAACTAGGCCAGTAAAAATAACTGG 312
||||||| ||||||||||||||| || | |||||||||||||||||| | |||||||
Sbjct 140751 -TTTTTTTTATTAGAATAAAATTGCAAATGTCAAACAACTAGGCCAGTGTGAGTAACTGG 140809
Query 313 GTCTTTTACCTT 324
| ||||||||||
Sbjct 140810 GACTTTTACCTT 140821
>seq2222
Length=174721
Score = 82.4 bits (90), Expect = 8e-12
Identities = 51/54 (94%), Gaps = 2/54 (4%)
Strand=Plus/Minus
Query 8555 TGAACGTGGACTTGGCGCAATTTTTT--ACAGTGAAACTGTTTTTGTTCGGATT 8606
|||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 169893 TGAACGTGGACTTGGCGCAATTTTTTTTACAGTGAAACTGTTTTTGTTCAGATT 169840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 51387208915322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |