Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_006653.1
Length=26062
Score E
Sequences producing significant alignments: (Bits) Value
seq2222 459 4e-125
seq1848 437 1e-118
seq272 293 4e-75
seq1562 109 9e-20
seq1774 95.1 2e-15
seq3471 93.3 7e-15
>seq2222
Length=174721
Score = 459 bits (508), Expect = 4e-125
Identities = 326/384 (85%), Gaps = 8/384 (2%)
Strand=Plus/Minus
Query 21495 TTTTACATCAACAGATTCGGTAGAATCTGGCGCCAAGTTCCGTTCTCTAGCCAGACTACC 21554
||| | ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 171108 TTTCAAATCAACAGAATCGGTAGAATCTGGCGCCAATTTCCGTTCTCAAGCCAGACTACC 171049
Query 21555 GAGTGTGTATATA----CCGTAAGCAGAACGGTTTTTTGAGGTTACANNNNNNNNNNNNN 21610
||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 171048 GAGTGTGTATATATATACCGTAAACAGAACGGTTTTTTGAGGTTACAAATTTTTTTTCAA 170989
Query 21611 NNNNNNNNNNNNNNNNNNNNATATGATATTTTATAATAGTAGTTCATGCTTTTTATTACG 21670
||||||||||||||||||||||||||||| |||||||||
Sbjct 170988 ATTTAATTTGATTTTTTTTTGTATGATATTTTATAATAGTAGTTCATGCTCTTTATTACG 170929
Query 21671 CGTATTACTTGATTATTATCAATTATCTTTATAATTTCTATTTAAAAATATTAAAAATAA 21730
|||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||
Sbjct 170928 CGTATTACTTGATTATTATCAATTATATTTATAATTTATATTTAAAATTATTATAAATAA 170869
Query 21731 TCAGCACAAACTATAGCGATCCAGAtttttagattttaacttttttGTTATGTAAAAAGC 21790
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 170868 TCAGCACAAACTATAGCGACTCAGATTTTTAGATTTTAACTTTTTTCTTATGTAAAAAGT 170809
Query 21791 GGACGGCCAGAGACTAAATAATATAAGGATGCATGCTAATCTTATAATAGATGGGAAAGA 21850
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 170808 GGACGGCCAGAGACTAAATACTATAAGGATGCATGCTAATCTTATAATAGATGG----GA 170753
Query 21851 AACTACAGTGaaaaaaaGATATTT 21874
||||||||||||||||||||||||
Sbjct 170752 AACTACAGTGAAAAAAAGATATTT 170729
Score = 257 bits (284), Expect = 3e-64
Identities = 174/194 (90%), Gaps = 11/194 (6%)
Strand=Plus/Minus
Query 21873 TTGACAGCTTGCAATTACACACGCCAGGCGGCGCAAGAATAACTTTTACATGAACTATAG 21932
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 170537 TTGACAGCTTGCAATTACACACGCCAGGCAGCGCAAGAATAACTTTTACATGAACTATAG 170478
Query 21933 CTTAAAGGGGATAGTTTGCCACCGGAAATGTGTATTAAATTAAAATTGTCAATTTTTATT 21992
|||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 170477 CTTAAAAGGGATAATTTGCCACCGGAAA--TGTATTAAATTAAAATTGACAATTTTTATC 170420
Query 21993 ATAATTACAAACAAAACTGAAATCCGAACAAAAACAGTTTCACTGT--aaaaaaaTCGCG 22050
||||||||||| || ||| ||| ||||||||||||||||| ||||||||||||
Sbjct 170419 ATAATTACAAAAAACACT-------GAATAAAAACAGTTTCACTGTAAAAAAAAATCGCG 170367
Query 22051 CCAAGTCCACGTTC 22064
|||||||||| |||
Sbjct 170366 CCAAGTCCACCTTC 170353
Score = 165 bits (182), Expect = 1e-36
Identities = 110/122 (90%), Gaps = 4/122 (3%)
Strand=Plus/Minus
Query 22219 ACGTACTTGGTGTGCGTCATTGTGTAC----TTCAAttttttttAAAAGTCCTAGTAGAT 22274
|| |||||||||||||||||||||||| |||| |||||||| ||||||||| ||||
Sbjct 170190 ACCTACTTGGTGTGCGTCATTGTGTACCTACTTCAGTTTTTTTTTAAAGTCCTACTAGAA 170131
Query 22275 AGATTTTAGGAATTTCATAAAAAGTGAAATATTTTGTAACTACGCACACTAAATACGTTC 22334
||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||
Sbjct 170130 AGATTTTAGGAATTTCATAAAAAGTGAAAAATTTCGTAACCACGCACACTAAATACGTTC 170071
Query 22335 CA 22336
||
Sbjct 170070 CA 170069
Score = 96.9 bits (106), Expect = 6e-16
Identities = 63/68 (93%), Gaps = 1/68 (1%)
Strand=Plus/Plus
Query 22013 AATCCGAACAAAAACAGTTTCACTGTaaaaaaa-TCGCGCCAAGTCCACGTTCATAAGAC 22071
|||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||
Sbjct 169840 AATCTGAACAAAAACAGTTTCACTGTAAAAAAAATTGCGCCAAGTCCACGTTCATAAAAC 169899
Query 22072 TATTAAGA 22079
||||| ||
Sbjct 169900 TATTAGGA 169907
Score = 91.5 bits (100), Expect = 2e-14
Identities = 60/65 (92%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 22475 TAATAGTCTTATGAACGTGGACTTGGCGCGA-tttttttACAGTGAAACTGTTTTTGATC 22533
||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| ||
Sbjct 169904 TAATAGTTTTATGAACGTGGACTTGGCGCAATTTTTTTTACAGTGAAACTGTTTTTGTTC 169845
Query 22534 GGATT 22538
||||
Sbjct 169844 AGATT 169840
>seq1848
Length=818965
Score = 437 bits (484), Expect = 1e-118
Identities = 321/382 (84%), Gaps = 8/382 (2%)
Strand=Plus/Plus
Query 21495 TTTTACATCAACAGATTCGGTAGAATCTGGCGCCAAGTTCCGTTCTCTAGCCAGACTACC 21554
||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 19603 TTTCAAATCAACAGATTCGGTAGAATCTGGCGCCAATTTCCGTTCTCAAGCCAGACTACC 19662
Query 21555 GAGTGTGTATATA--CCGTAAGCAGAACGGTTTTTTGAGGTTACANNNNNNNNNNNNNNN 21612
||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 19663 GAGTGTGTATATATACCGTAAGCAGAACGGTTTATTGAGGTTACAATTTTTTTTTTTAAA 19722
Query 21613 NNNNNNNNNNNNNNNNNNATATGATATTTTATAATAGTAGTTCATGCTTTTTATTACGCG 21672
||||||||||||||||||||||| ||||| |||||||||||
Sbjct 19723 TTTAAATTGTTTTTTTTTGTATGATATTTTATAATAGTAGTTTATGCTCTTTATTACGCG 19782
Query 21673 TATTACTTGATTATTATCAATTATCTTTATAATTTCTATTTAAAAATATTAAAAATAATC 21732
||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 19783 TATTA--TGATTATTATCAATTATCTTTATAATTTCTATTTAAAATTATTATAAATAATC 19840
Query 21733 AGCACAAACTATAGCGATCCAGAtttttagattttaacttttttGTTATGTAAAAAGCGG 21792
||||||||||||||||| || |||||||||||||||||||||| |||||||||||| ||
Sbjct 19841 AGCACAAACTATAGCGACTCAAATTTTTAGATTTTAACTTTTTTCTTATGTAAAAAGTGG 19900
Query 21793 ACGGCCAGAGACTAAATAATATAAGGATGCATGCTAATCTTATAATAGATGGGAAAGAAA 21852
|| ||||||||||||||| |||||||||||||||||||||||||||| |||| ||||
Sbjct 19901 ACAGCCAGAGACTAAATACTATAAGGATGCATGCTAATCTTATAATAAATGG----GAAA 19956
Query 21853 CTACAGTGaaaaaaaGATATTT 21874
||||||||| ||||||||| ||
Sbjct 19957 CTACAGTGATAAAAAGATAGTT 19978
Score = 302 bits (334), Expect = 7e-78
Identities = 189/201 (94%), Gaps = 3/201 (1%)
Strand=Plus/Plus
Query 21880 CTTGCAATTACACACGCCAGGCGGCGCAAGAATAACTTTTACATGAACTATAGCTTAAAG 21939
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 20115 CTTGCAATTACACACGCCAGGCAGCGCAAGAAAAACTTTTACATGAACTATAGCTTAAAG 20174
Query 21940 GGGATAGTTTGCCACCGGAAATGTGTATTAAATTAAAATTGTCAATTTTTATTATAATTA 21999
||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||
Sbjct 20175 GGGATAGTTTGCCACCGGAAA--TGTATTAAATTAAAATTGTCATTTTTTATCATAATTA 20232
Query 22000 CAAACAAAACTGAAATCCGAACAAAAACAGTTTCACTGT-aaaaaaaTCGCGCCAAGTCC 22058
|||| || ||||||||||||| |||| |||||||||||| ||||||||||||| ||||||
Sbjct 20233 CAAAAAATACTGAAATCCGAATAAAAGCAGTTTCACTGTAAAAAAAATCGCGCTAAGTCC 20292
Query 22059 ACGTTCATAAGACTATTAAGA 22079
|||||||||||||||||||||
Sbjct 20293 ACGTTCATAAGACTATTAAGA 20313
Score = 95.1 bits (104), Expect = 2e-15
Identities = 62/67 (93%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 22473 CTTAATAGTCTTATGAACGTGGACTTGGCGCGA-tttttttACAGTGAAACTGTTTTTGA 22531
|||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct 20312 CTTAATAGTCTTATGAACGTGGACTTAGCGCGATTTTTTTTACAGTGAAACTGCTTTTAT 20253
Query 22532 TCGGATT 22538
|||||||
Sbjct 20252 TCGGATT 20246
>seq272
Length=85250
Score = 293 bits (324), Expect = 4e-75
Identities = 311/411 (76%), Gaps = 38/411 (9%)
Strand=Plus/Minus
Query 5885 ATAAAATATTAAAAATGTACAGAACGATGTACAAA---------------GTCTAAAGTA 5929
|||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct 74378 ATAAGATATTAAAAATATACAGAACGATGTACAAAAATATACAGAACGGTGTCTAAAGTA 74319
Query 5930 TTATAAGAACTTGAGTTATGCAATTCTTTTAATTAATAAACATTTGTAAAAAATAGTTAA 5989
||| ||||||| | | |||| || |||||| ||||||||||||||||||||||||| |
Sbjct 74318 ATATTAGAACTTAACTCTTGCATTT-TTTTAACTAATAAACATTTGTAAAAAATAGTTTA 74260
Query 5990 TATTTATCAAAACACAATATTAAATAACATAAATTATCTTAATAATGAACCGTTACACTT 6049
| || |||||||||||||||| ||||||||||||||| | |||||| ||| || ||||||
Sbjct 74259 TTTTCATCAAAACACAATATTGAATAACATAAATTATATAAATAATAAACTGTCACACTT 74200
Query 6050 CG-CCATGCATAAATTTAGCTTATAATAATGATGAGATGTATATC------------AAT 6096
|| | | ||| |||||| |||||| |||||| ||||| ||| |
Sbjct 74199 CGTCAACTTATAGATTTAGTTTATAAGAATGATACGATGTGCATCCTCCTCCTTCGTACC 74140
Query 6097 TTATCGGTCGTATACGGTGTAGGGGTTAGTTATCGGTCTGG--AGAGCGCGTCTTGGGTT 6154
| ||| |||| ||||| |||| |||||||||||||| ||| || ||||| || |||||
Sbjct 74139 TCATCCGTCG--TACGGCGTAGAGGTTAGTTATCGGTTTGGCAAGCGCGCGGCTCGGGTT 74082
Query 6155 CGAATCTCGGTTAGAAC-----TTGATTTTCACTTTATTTCTAGAGTTAGCGAAAGTTAG 6209
||||||||||||||||| ||||||||||||||||||| | ||||||| ||||||
Sbjct 74081 CGAATCTCGGTTAGAACGGAATGCGATTTTCACTTTATTTCTATAATTAGCGATAGTTAG 74022
Query 6210 ATCCAAATAAAAAGTCAAGCGGTCTTATTATGTGTTAGCTCGACATTAAAA 6260
|| |||| || | ||| ||| | | || ||||| || |||| ||||
Sbjct 74021 GTCTAAATTAAGACACAAATGGTATAAACTTGCGTTAGTTCTACATCAAAA 73971
Score = 152 bits (168), Expect = 9e-33
Identities = 156/199 (78%), Gaps = 6/199 (3%)
Strand=Plus/Minus
Query 25136 TATGTATAGTAGGGTTTGCCAAAATTCAATTTCCGTGAGGAACCTTTTAAAATTGGAATT 25195
||| || | |||||| ||||||||| | |||| ||| | |||||||||||||| ||||
Sbjct 72981 TATATAGATTAGGGTGTGCCAAAATGTGACTTCCTTGATGGACCTTTTAAAATTGTAATT 72922
Query 25196 TTGAGTTCTGCTTTTAACAGGAG--CTGTTTGGGCATTTTCTGA-GATATTTTGGAGGAA 25252
|| ||||| ||||| |||||||| ||||||| ||||| |||| |||||||| | |
Sbjct 72921 TTAAGTTCCGCTTTCAACAGGAGTTATGTTTGGACATTTCCTGACAATATTTTGAGCGTA 72862
Query 25253 AATGATTTATTTGGTTTTCATAGAATTTTTTAACAGGAGCTTTACTTTCCGGGAAATTCC 25312
|| |||||||||| |||| ||||||||||||||||| || ||| |||| || | ||
Sbjct 72861 AAAGATTTATTTGATTTTTATAGAATTTTTTAACAGCAG-TTTTGTTTC--GGCATTTTT 72805
Query 25313 GCTGAAATTTCAAAATATC 25331
| || ||||| ||||| ||
Sbjct 72804 GTTGGAATTTTAAAATTTC 72786
Score = 114 bits (126), Expect = 2e-21
Identities = 94/113 (83%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 25322 TCAAAATATC-TCAAGAAATGCCCAAACACAGCTCCTGTTAAAAGCGAAACTCAAAATTC 25380
||||||||| ||| |||||| ||||||| | |||||||| |||||| |||| ||||||
Sbjct 72867 TCAAAATATTGTCAGGAAATGTCCAAACATAACTCCTGTTGAAAGCGGAACTTAAAATTA 72926
Query 25381 CAATTTTTAAAGGTTCCTCATGGAAATTGAATTTTGGCACACCCTAATGTATA 25433
||||||| |||||| | ||| |||| | |||||||||||||||||| ||||
Sbjct 72927 CAATTTTAAAAGGTCCATCAAGGAAGTCACATTTTGGCACACCCTAATCTATA 72979
>seq1562
Length=1215849
Score = 109 bits (120), Expect = 9e-20
Identities = 110/141 (78%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 11015 AGTTGGCAGACAGAA-ACTCTCTCGCTACGCTATCCGAGATAAACTACTACGAATGTCCT 11073
|||||| || ||| |||||| | |||||||||||||||||| | |||| ||||||
Sbjct 337290 AGTTGGTAGCTAGACGACTCTCCCTCTACGCTATCCGAGATAATCCACTATTGATGTCCC 337231
Query 11074 TTAGCACTTACAGAAACTCGGAGTTTACTGCTTTGCACGGCAA--ACACACACTAATTAA 11131
| |||| ||||| |||||||||| || ||||||||| | | || |||||||||| |
Sbjct 337230 TCAGCATTTACATTAACTCGGAGTCTAGCGCTTTGCACTCCCATCACTCACACTAATTGA 337171
Query 11132 AAAATATTCCAATTCTACTAT 11152
|||| |||| |||| |||||
Sbjct 337170 AAAACATTCTAATTTAACTAT 337150
>seq1774
Length=19167
Score = 95.1 bits (104), Expect = 2e-15
Identities = 87/107 (81%), Gaps = 6/107 (6%)
Strand=Plus/Minus
Query 17703 CCATAAAGGCGTagaataaaaattctattatttttt-aaagtccgaaagaaatttttaat 17761
||||||||||||| |||||||||||||||||||||| ||||| || ||| ||||| |
Sbjct 17568 CCATAAAGGCGTATAATAAAAATTCTATTATTTTTTGTAAGTCTAAACAAAAATTTTAGT 17509
Query 17762 ttagagaaattttttccttttGCATTCCTGCACATTTCAT--GAAAA 17806
||| ||||| |||| |||| || | |||||| |||||| |||||
Sbjct 17508 TTAAAGAAAATTTT---TTTTTCAATTCTGCACGTTTCATAGGAAAA 17465
>seq3471
Length=20400
Score = 93.3 bits (102), Expect = 7e-15
Identities = 86/107 (80%), Gaps = 3/107 (3%)
Strand=Plus/Plus
Query 17703 CCATAAAGGCGTagaataaaaattctattatttttt-aaagtccgaaagaaatttttaat 17761
||||||||||||| |||||||||||||||||||||| ||||| || ||| ||||| |
Sbjct 9512 CCATAAAGGCGTATAATAAAAATTCTATTATTTTTTGTAAGTCTAAACAAAAATTTTAGT 9571
Query 17762 ttagagaaattttttccttttGCATTCCTGCACATTTCAT--GAAAA 17806
||| ||||| ||| |||| || | |||||| |||||| |||||
Sbjct 9572 TTAAAGAAAAAATTTTTTTTTCCAATTCTGCACGTTTCATAGGAAAA 9618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 83241137309925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |