Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_006654.1 Length=13597 Score E Sequences producing significant alignments: (Bits) Value seq2475 3213 0.0 seq2707 185 8e-43 seq1848 178 1e-40 seq2222 174 1e-39 >seq2475 Length=270261 Score = 3213 bits (3562), Expect = 0.0 Identities = 2298/2641 (87%), Gaps = 65/2641 (2%) Strand=Plus/Minus Query 1295 GTATTCAAGTTTTGGCTTTAGACGTGTAACGACTTATCTATTCGAAGATTAAGTGTGGAA 1354 || ||| ||||||||||||||||||||||| |||||||||||||||||||||| | | | Sbjct 47023 GTGTTCCAGTTTTGGCTTTAGACGTGTAACAACTTATCTATTCGAAGATTAAGCG-GATA 46965 Query 1355 AAAAGTAGAAGAAAT-TGGTTTATCTATTAACGAAGAAAAAGAGATACTGATGGAAATAT 1413 |||||||||| ||| |||||||| |||| |||||||||||||||||||||||||||||| Sbjct 46964 AAAAGTAGAAAAAAAATGGTTTATATATTCACGAAGAAAAAGAGATACTGATGGAAATAT 46905 Query 1414 TTGGAATTCATACATGAAGTAGATACAAGCATCAAAATGGTATGTTTTAACATTAAtttt 1473 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct 46904 TTGGAATTCATACATGAAGTAGATACAAGCACCAAAATGGTATGTTTTAGCATTAACTTT 46845 Query 1474 ttttGAAGTAATACGTAAATACTGATACCATAGAATATTCGATGGAAAACTCCACGTGGC 1533 | |||| ||||||||||||||||||| |||||||| ||||||||||||| |||| ||| Sbjct 46844 T---GAAGCAATACGTAAATACTGATACGATAGAATAATCGATGGAAAACTTCACGCGGC 46788 Query 1534 AGGTCTGTGAGCGAATGAGGCTCGCTCGGGTGAAATCTATTTATAGAATGGCGTGACTGG 1593 |||||||||| | |||| ||| | | ||||||| | |||||||||||| || || Sbjct 46787 AGGTCTGTGAACCAATGGGGCCCACCCGGGTGATAGTTATTTATAGAATCACGCTTTTG- 46729 Query 1594 CGTTGTTTT-ACGATATCGATTTACTTTGGATTTACGAAAGTATTTTTATTTGTTTCAGA 1652 ||||||||| |||||||||||||||| || |||||||||||||||||| ||||||| ||| Sbjct 46728 CGTTGTTTTGACGATATCGATTTACTCTGTATTTACGAAAGTATTTTTTTTTGTTTTAGA 46669 Query 1653 TGAAACGTCATAATAACTATAAGCGAGCGTTTTATGTCGTTCAATTTATAGAATTGCCTT 1712 |||| |||||||||||||||| ||||||||||||||||||||| || ||||| ||||||| Sbjct 46668 TGAACCGTCATAATAACTATAGGCGAGCGTTTTATGTCGTTCAGTTCATAGACTTGCCTT 46609 Query 1713 TTGAAGGTATTGATGATTACGTATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGA 1772 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 46608 TTGAAGGTATTGATGATTACGTATGCGTGCCGTCCACTTGGCTGATAGTACGTAATGCGC 46549 Query 1773 CGGATCAGAAGGCTGTCGTTGCTTACCCTAAAGACGAAGATCCTTTCAACACCAGAGATC 1832 || |||| ||| | || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 46548 CGTATCACAAGTCCGTTGTTGCGTACCCTAAAGACGAAGATCCTTTCAACACCAGAGATC 46489 Query 1833 GCGTTAAAAGGAAAGAAAGACACAATCACGAGTGGAGATTTTATATGGCTATCGTTAAAT 1892 ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |||| Sbjct 46488 GCGTTAAAAGGAAGGAAAGACACAATAACGAGTGGAGATTTTATGTGGCTATCGTCAAAT 46429 Query 1893 ATGAATCAGGTGAGTTTGAATCAATGTATTAGGTAATTCGATTGTGCGTAGTATTGTCGC 1952 ||||||||||||||||||||||||||||||| ||||| |||| || ||||||| ||| Sbjct 46428 ATGAATCAGGTGAGTTTGAATCAATGTATTATTTAATTTTGTTGTTCGCAGTATTGCCGC 46369 Query 1953 AGTATA----TTTGAACCTAGATAGTCTCAGAAATTGAGAGAAAGTAATAttttttttat 2008 |||||| ||||| |||||||||||||||||||||||||||||||||||| || || Sbjct 46368 AGTATAGGTATTTGACCCTAGATAGTCTCAGAAATTGAGAGAAAGTAATATTATTATT-- 46311 Query 2009 tttttCAGATAGTTACGGAGATGCAGAATATTGGATTGCGACAAGAAATGATTATGGTCC 2068 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct 46310 --TTTCAGATAGTTACGGAGATGCAGAATATTGGATTGCGACGAGAAATGATTATGAACC 46253 Query 2069 TTTAGTAGAAAAAGAATTAAAAACAACAGGTGAGAATCGAATCAGTTTATTAGTCTTAAC 2128 ||| || ||| ||||||||||||| ||||||||||||| ||||| |||||||||||||| Sbjct 46252 TTTGGTGGAATAAGAATTAAAAACGACAGGTGAGAATCAAATCATTTTATTAGTCTTAAA 46193 Query 2129 GATTTAATTTCCATTGTAAATTTATTTTTAGATCCAACTTATTTTAAATTTAAAGCCCTC 2188 | |||||||| |||| |||||||||||| |||| | |||||||| ||||||||||| ||| Sbjct 46192 GTTTTAATTTTCATTCTAAATTTATTTTCAGATACCACTTATTTCAAATTTAAAGCTCTC 46133 Query 2189 CAAATTATAACCAATCTTTTTATTTCCAGATTCAGAACCAAAGTTCCCGTTAAACAAGAA 2248 |||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 46132 GAAATAATAGTCAGCTTTTTCATTTCCAGACTCAGAACCAAAGTTCCCGTTAAACAAGAA 46073 Query 2249 ATTGCGTGTTGCCAACCGAAACCATTCGTCCAAATTAAATGATAATCCTCGGAAACCACT 2308 |||||| |||||||||||||||||||| || ||| |||||||||||| ||||||| |||| Sbjct 46072 ATTGCGCGTTGCCAACCGAAACCATTCTTCGAAACTAAATGATAATCATCGGAAAACACT 46013 Query 2309 GCCGAGAATATCAATCAAGCGACCAGCACTACCAGAACCGAACAAACAACTTGATGGGAA 2368 || | || |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 46012 CCCAAAAACATCAATTAAGCGACCAGCACTACCAGAACCAAACAAACAACTTGATGGGAA 45953 Query 2369 ACGGATAAAACTGGATGACGCTGCTCAGTCATCTAGCGCTGTTGTGACTGACGCTAATGC 2428 ||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||| Sbjct 45952 ACGGAAGAAACTGGATGACGCTGCTCAGTCATCTAGCGCTGTTGTTACCGACGCTGATGC 45893 Query 2429 AGAGCCTGGATCATCAAGACAGGAACAATCGATTATCGCTCAGGACAACCAACCAATGGA 2488 |||||||||||| |||||||||||||| | |||| |||| | |||||| ||||||||| | Sbjct 45892 AGAGCCTGGATCTTCAAGACAGGAACAGTAGATTTTCGCACGGGACAAACAACCAATGAA 45833 Query 2489 ATCTGCTCAGACAGAAACAACTGCTAGTGATTCTAACGGTACATCAAGCTCCTCTCAGCG 2548 |||||||||| ||| |||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 45832 ATCTGCTCAGTCAGGAACAACTGTTAGTGATTCTAACGGTACATCTAGCTCCTCTCAGCA 45773 Query 2549 GAAAGATGAAAACCTCCAAGAATCGTTACCAATACAAGAGCAACAAGAATTGGGTATGCC 2608 ||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||| Sbjct 45772 GAAAGATGAAAACCTCCAAGAATTGTTACCAATAAAAGAGCATCAAGAATTCAGTATGCC 45713 Query 2609 GTACATAGATGTAGCTACATCAGATACACCAGCCCTTGTTATAGACGAGGATGAAGAAGT 2668 ||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| Sbjct 45712 TTACGTAGATGTAGCTACACCAGATACACCAGCCCTTGTGATAGACGACGATGAAGAAGT 45653 Query 2669 CCAGACTGCCAGTATTGTGGAACAGCAAGTACCCTCTAATCAAGCTATCTCACAATTTAC 2728 |||| || |||||||||| ||||||||||||||||||||||||| | Sbjct 45652 CCAGCCTACCAGTATTGTAGAACAGCAAGTACCCTCTAATCAAG---------------C 45608 Query 2729 TGAACAGCCGGAACCCATCCGGGAACCTAAAATTCCAGTGGCCCCATCAATAGAGATGAC 2788 |||||||||| |||| ||| |||||||| ||||| |||| ||||| |||||||||||||| Sbjct 45607 TGAACAGCCGAAACCGATCTGGGAACCTCAAATTTCAGTAGCCCCGTCAATAGAGATGAC 45548 Query 2789 TAACAATAGTCAAGGATCCCGCATGGATGACGCCTTAAATAACGGACCTACTTCTAATCG 2848 || ||||| ||||||||| ||||| ||||| | ||||||||| |||||||||||| ||| Sbjct 45547 TAGCAATAATCAAGGATCTCGCATAGATGAAGTCTTAAATAATGGACCTACTTCTCATCA 45488 Query 2849 CTTACTGAATTCACCAAAAATTTCTGCTCAACTATATAGTCAAATGATCGAGGCACGGCG 2908 |||||| ||||||||||||||||||||||| |||| ||| ||||||| |||||||||||| Sbjct 45487 CTTACTAAATTCACCAAAAATTTCTGCTCAGCTATTTAGACAAATGAACGAGGCACGGCG 45428 Query 2909 TTTAATACCGACTCAAAAACCGGTTGAGAAAAATTTGCGCCCCATGAATATCGCAAGAAA 2968 ||| |||||||||||||| ||||||||||| | ||||||| || ||||||||| ||| Sbjct 45427 TTTGGTACCGACTCAAAAAACGGTTGAGAAAGA-ATGCGCCCGATTAATATCGCACAAAA 45369 Query 2969 TTTGGCCATTACCGAACATAACTCATCGAATTTAATGGACCAAACTGGATCTTTATCGAC 3028 |||||| ||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| Sbjct 45368 TTTGGCTATTACCGAACAGAACTCATCGGATTTGATGGACCAAACTGAATCTTTATCGAC 45309 Query 3029 GCGCTCAGTGCCGATTCAACAACAACATCACACGTCGTCATATCAGAATCAAAATCTACC 3088 ||| ||| |||||| |||||||||| |||| |||||||| |||||||||||| ||||||| Sbjct 45308 GCGATCAATGCCGACTCAACAACAATATCATACGTCGTCTTATCAGAATCAATATCTACC 45249 Query 3089 GACTAATCAAAGTAACTTTGAACAAGACTTACTTAGCAAATCTGCAGAGACCAACAATTA 3148 |||||||| | || ||||||||| ||||||| || ||||||||||||| ||||||||| Sbjct 45248 GACTAATC---GAAAGTTTGAACAAAACTTACTAAGGAAATCTGCAGAGAGCAACAATTA 45192 Query 3149 CGAACAGCGTCCTAACTCTCGGCCTATCAGAATGAGTACTCCATCTATCGGACAAAATTC 3208 ||||| |||||||||||||| |||||| |||||||||||||||||| ||||||||||| Sbjct 45191 TGAACAACGTCCTAACTCTCGAACTATCAAAATGAGTACTCCATCTATTGGACAAAATTC 45132 Query 3209 TATTAATTCTTCCACTCCGTTATACCAGATCTCCGAGCTTCCACAACTAAGACAGTCGCA 3268 |||| | |||| |||||| || ||||||||| |||||||||||| ||||||||||| Sbjct 45131 TATTGTCCCGTCCAGTCCGTTGTATCAGATCTCCAAGCTTCCACAACAGAGACAGTCGCA 45072 Query 3269 GCCATCTCAGCAAGACTCACAACGGCAACCACAGAAACCGAAAAGACGTATTGGCACCTC 3328 || |||||||||||||||||||||||||||| | |||||||||| || ||| || ||| Sbjct 45071 GCTATCTCAGCAAGACTCACAACGGCAACCATAAAAACCGAAAATGTGTGTTGACATCTC 45012 Query 3329 TACCAAGCCACAAAACAACCG---GCA-----------AACACCTACTTTTCAAGTCACA 3374 |||||||||| |||||||||| ||| |||||| ||||||||||| Sbjct 45011 TACCAAGCCAAAAAACAACCGCTTGCAGGTTGTTTTTGGCTACCTACCTTTCAAGTCACG 44952 Query 3375 AAAGAAACGCTGTCACCTATTCTTACGAAGGTTCTAAATTCGCTACGACAAGCATTATCA 3434 |||| |||||||||||| |||||||| || |||||| |||| |||| |||||||||||| Sbjct 44951 AAAGGAACGCTGTCACCCATTCTTACAAAACTTCTAATTTCGGTACGGCAAGCATTATCA 44892 Query 3435 ACTACTCATAACCAATATCTTCTGAACGAGCAGCAATTTCAGGGAAATCATAGTG-AACG 3493 || ||||||| ||||||||||| |||||| ||||||||||| ||||||||||||| |||| Sbjct 44891 ACAACTCATAGCCAATATCTTCAGAACGAACAGCAATTTCAAGGAAATCATAGTGAAACG 44832 Query 3494 TGCACCTGTTGATGAAAATCATCTCAGCCAAATTGACAATACATTGCAAACAGATGAGCG 3553 ||||| |||| ||||||||||||| ||| ||||||||||||| ||||||||||||||| | Sbjct 44831 TGCACTTGTTAATGAAAATCATCTAAGCGAAATTGACAATACGTTGCAAACAGATGAGTG 44772 Query 3554 GATGGAAGAAGAAACTCCGTCAGCGCATCATGGGGCAAATTCAGATTCCGATACTATTAC 3613 |||| ||||||||||||| ||||||||||| |||||| | ||||||||||||| | ||| Sbjct 44771 GATGAAAGAAGAAACTCCATCAGCGCATCACGGGGCAGACTCAGATTCCGATATTGGTAC 44712 Query 3614 CGATCATGAAGTCACCTCAGATCATGAGATGTCTGCAGATGAAGCACCTGTTGAAAGAAC 3673 |||||||||||| | |||||||||||||||||| ||||||||||||||| ||||| ||| Sbjct 44711 CGATCATGAAGTAATCTCAGATCATGAGATGTCCGCAGATGAAGCACCTACTGAAACAAC 44652 Query 3674 GAATAACTTTTACGGCCCTGGAATCAGTTCTGGAAGTAGCTCTGCACACAGACCGATAGC 3733 |||||||||||||| ||||||||||| ||||||||| |||| | || | ||||||||||| Sbjct 44651 GAATAACTTTTACGACCCTGGAATCACTTCTGGAAGAAGCTGTACAGAAAGACCGATAGC 44592 Query 3734 TGCACAAAACTCTACGAACCACCAGACGCATTCTAAAGTTGTATTGGAGCAGCAAATGTT 3793 |||||||||||| | ||||||||||||| |||||||| ||| || ||||| |||||||| Sbjct 44591 TGCACAAAACTCCAAGAACCACCAGACGTATTCTAAACTTGAGTTAGAGCAACAAATGTT 44532 Query 3794 AGACAACTTTGCTACACTCTTCACTCAAATGGGATCTACTTTGCGTTATACT-------- 3845 || ||||| ||||| ||||||||||||||||| ||||||||||||||| || Sbjct 44531 GGATAACTTCGCTACCCTCTTCACTCAAATGGGGTCTACTTTGCGTTATGCTACTGATAC 44472 Query 3846 --------ACTGATATGTACAACACCCTACGGAGTTCGATCCTCGATACTGCCCAAACAT 3897 |||||||||||||||||| || | | ||||||||| || |||||| | |||| Sbjct 44471 TAATACTGACTGATATGTACAACACCTTAGGAACTTCGATCCTTGACACTGCCGAGACAT 44412 Query 3898 A 3898 | Sbjct 44411 A 44411 Score = 760 bits (842), Expect = 0.0 Identities = 496/545 (91%), Gaps = 3/545 (1%) Strand=Plus/Minus Query 4070 TGCTAACAATCCACCGAAGAAAAAACACAACTCATGGCGTTTTGTTCTACCATCGGAATA 4129 ||||||| | |||||||||||||||| |||||||| ||||||||||||| ||||| |||| Sbjct 44386 TGCTAACGAACCACCGAAGAAAAAACGCAACTCATCGCGTTTTGTTCTAACATCGAAATA 44327 Query 4130 TGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACCAATCTGCCGGGACTTGTAGA 4189 |||||||| |||||| | ||||||||||| |||||||||||||||||| ||| ||||| | Sbjct 44326 TGATCCTCATGATACAAAATGGACATTGAGGTATCGAACCAATCTGCCAGGAATTGTAAA 44267 Query 4190 ACTTATGCCTCAAAGTGATGTTTACGTCAGCTACGGAGACCTCAAATACTGTCAGCAAGT 4249 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 44266 ACTTATGCCTCAAAGTGGTGTTTACGTTAGCTACGGAGACCTCAAATACTGTCAGCAAGT 44207 Query 4250 ATCAAAAGATTGCAAATCATTAGCACTACGATTATTACCAGCAGTATTCAACAGCAAAGC 4309 |||||||||||||||||||| | |||||||||| ||| || ||||||||||||| ||||| Sbjct 44206 ATCAAAAGATTGCAAATCATAAACACTACGATTGTTAACAACAGTATTCAACAGAAAAGC 44147 Query 4310 ATTGAGTGTTTGTTTATCAATTACTGAGAGAGCGCAGGCTTCTGATAATGTTCGATCTAA 4369 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 44146 ATTGAGTGTTTGTTTATCAATGACTGAGAGAGCGCAGGCTTCTGATAATGTCCGATCTAA 44087 Query 4370 TGCAAGGCCAGAATTAGATGATCACGCGTGTTCGGCACTGTTAAATTTCGTTTTAGAACA 4429 |||||||||||||| |||||||||||||||||||| |||||| |||||| |||||||||| Sbjct 44086 TGCAAGGCCAGAATAAGATGATCACGCGTGTTCGGTACTGTTGAATTTCATTTTAGAACA 44027 Query 4430 CGGACTACAACGTGGTTGGAATACTGACCTGCAACCTATCCTCAGTACTTTACACAGTAA 4489 ||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||| ||| Sbjct 44026 CGGACTAAAACGTGGTTGAAATACTGACTTGCAACCTATCCTCAATACTTTACACAATAA 43967 Query 4490 GATTCAAGAGATTCGGTTCAGATATGGTGTGATGGTTGAATGTTAAATATTATGATTACT 4549 ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 43966 GATTCAAGAGATTCGGTTCAGATATGGTGTGTTGGTTGAATGTTAACTATTATGATTACC 43907 Query 4550 AATAATTGATCGTAAGTCGAGTTATCATTTGTTCTCAAATGCTGAGGCTAACAACCTTGC 4609 ||||| ||||| | ||||||||||| ||| || |||| |||||||||| | |||| Sbjct 43906 AATAACTGATCTTGAGTCGAGTTATATCATGTGCTAAAATCCTGAGGCTAAGA---TTGC 43850 Query 4610 CATTT 4614 ||||| Sbjct 43849 CATTT 43845 >seq2707 Length=98620 Score = 185 bits (204), Expect = 8e-43 Identities = 290/409 (71%), Gaps = 11/409 (3%) Strand=Plus/Plus Query 4111 TTGTTCTACCATCGGAATATGATCCTCGTGATACCAGATGGACATTGAAGTATC--GAAC 4168 || |||||||| |||| ||||||||| |||||| |||||||| |||||||||| |||| Sbjct 65944 TTATTCTACCACCGGAGTATGATCCTAATGATACAAGATGGACCTTGAAGTATCATGAAC 66003 Query 4169 CAATCTGCCGGGACTTGTAGAACTTATGCCTCAAAGTGATGTTTACGTCAGCTACGGAGA 4228 || |||| || || ||||||||||||||||| | ||||||| |||| |||| |||| Sbjct 66004 --ATATGCCAGGGCTCGTAGAACTTATGCCTCACACCAATGTTTATGTCAACTACAGAGA 66061 Query 4229 CCTCAAATACTGTC-AGCAAGTATCAAAAGATTGCAAATCATTAGCACTACGATTATTAC 4287 || || || | || | || |||| |||| ||||||||| | |||| | || | Sbjct 66062 GCTGAAGTA-TATCGAAGAAACGTCAACTAGTTGCGCATCATTAGCGCGACGAATTTTGC 66120 Query 4288 CAGCAGTATTCAACAGCAAAGCATTGAGTGTTTGTTTATCAATTACTGAGAGAGCGCAGG 4347 | ||| |||| || |||| | ||||| |||| || || || || | || | Sbjct 66121 AGGAAGTCTTCAGCAAGGAAGCTCTCAGTGTGTGTTCGTCGATGACCGAAAAAG----GC 66176 Query 4348 CTT-CTGATAATGTTCGATCTAATGCAAGGCCAGAATTAGATGATCACGCGTGTTCGGCA 4406 ||| | ||| || || ||| |||||| ||||| |||| |||| || | | Sbjct 66177 CTTGATCATAGCATTTATCCTGATGAGAGGCCAAAATTAAATGAACACGGATGCTTAGTC 66236 Query 4407 CTGTTAAATTTCGTTTTAGAACACGGACTACAACGTGGTTGGAATACTGACCTGCAACCT 4466 || | |||| | || | || |||||||| |||||||| ||||| |||||| |||| || Sbjct 66237 TTGCTCAATTACATTCTGGAGCACGGACTTCAACGTGGCTGGAAAACTGACATGCAGACT 66296 Query 4467 ATCCTCAGTACTTTACACAGTAAGATTCAAGAGATTCGGTTCAGATATG 4515 ||||||| |||||| |||| || || | || || ||||||| || Sbjct 66297 ATCCTCAAAGGCTTACACGATAAGGTTAAAAAAATACGATTCAGATTTG 66345 Score = 174 bits (192), Expect = 1e-39 Identities = 275/388 (71%), Gaps = 12/388 (3%) Strand=Plus/Plus Query 1687 TGTCGTTCAATTTATAGAATTGCCTTTTGAAGGTATTGATGATTACGTATGCGTGCCGTA 1746 ||| || || || |||||||| |||||| ||||||||||||||||||| || || ||| | Sbjct 63424 TGTGGTGCAGTTCATAGAATTACCTTTTAAAGGTATTGATGATTACGTGTGTGTACCGGA 63483 Query 1747 CACTTGGCTGATAGTACGTAAAGCGA--CGGATCAGAAGGCTGTCGTTGCTTACCCTAAA 1804 ||||| || ||| |||| || ||||||||| | || || || ||||||| Sbjct 63484 GGGCTGGCTAGTAATAC--AAAGAGAACAGGATCAGAAAGTGGTTGTCGCATACCCTATG 63541 Query 1805 GACGAAGATCCTTTCAACACCAGAGATCGCGTTAAAAGGAAAGAAAGACACAATCACGAG 1864 | |||||||| || || |||| ||||||| ||| |||||| | |||| | | Sbjct 63542 AAAGAAGATCCCTTTGTTACAGGAGAACGCGTTATAAGAGAAGAAAAATGCAATGATGGT 63601 Query 1865 TGGAGATTTTATATGGCTATCGTTAAATATGAATCAGGTGAGTTTGAATCAATGTATTAG 1924 |||| || | |||||| | |||||| ||||||||| |||||| |||||| ||||| Sbjct 63602 TGGAAGTTCTGGATGGCTGAACTAAAATATCAATCAGGTGCGTTTGATTCAATGAATTAG 63661 Query 1925 GTAATTCGATTGTGCGTAGTATTGTCGCAGTATATTTGAACCTA-GATAGTCTCAGAAAT 1983 || || || | | ||||||| | || ||| | || ||| | |||||||| Sbjct 63662 TTAGTTAGAAT-----TTGTATTGTTAAAAAATTTTTAGATTTATAATACT-TCAGAAAT 63715 Query 1984 TGAGAGAAAGTAATAtttttttta-ttttttCAGATAGTTACGGAGATGCAGAATATTGG 2042 || || || |||| | | | | |||||| |||||||| | ||||||| | | |||| Sbjct 63716 CGATAGCAAATAATTTATGGATAATTTTTTTTAGATAGTTTCAAAGATGCAAATTTTTGG 63775 Query 2043 ATTGCGACAAGAAATGATTATGGTCCTT 2070 || || || || ||||||||| | |||| Sbjct 63776 ATAGCTACGAGGAATGATTATAGGCCTT 63803 >seq1848 Length=818965 Score = 178 bits (196), Expect = 1e-40 Identities = 162/207 (78%), Gaps = 17/207 (8%) Strand=Plus/Minus Query 168 CTTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgt 227 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| | Sbjct 20312 CTTAATAGTCTTATGAACGTGGACTTAGCGCGATTTTTTTTACAGTGAAACTGCTTTTAT 20253 Query 228 tcggattttagtattttttgtaattataataaaaatttaCAATTGGTACCAACTTAAATC 287 |||||||| |||||||||||||||||| ||||||| | |||||| |||| Sbjct 20252 TCGGATTTCAGTATTTTTTGTAATTATGATAAAAAATGACAATT---------TTAA--- 20205 Query 288 TCGCGTTGGCTGCATTTTTTATAGCAAACTATCCCCTTGAAGCTACAGTTTATGTAAAAA 347 || | ||||| | ||||||||||||||| |||||| |||| |||||||| Sbjct 20204 -----TTTAATACATTTCCGGTGGCAAACTATCCCCTTTAAGCTATAGTTCATGTAAAAG 20150 Query 348 TAATTCCAGCGCACCCTGGCAGGTGTA 374 | ||| |||| |||||| ||||| Sbjct 20149 TTTTTCTTGCGCTGCCTGGCGTGTGTA 20123 Score = 158 bits (174), Expect = 1e-34 Identities = 268/389 (69%), Gaps = 47/389 (12%) Strand=Plus/Minus Query 388 AAATATCtttttttAACTGTAGTTTCCCATCTAATGAAGGATTACTATACATTCTCGAAT 447 || ||||||||| | ||||||||||||||| || | | ||||| || ||| || | Sbjct 19978 AACTATCTTTTTATCACTGTAGTTTCCCATTTATTATAAGATTAGCATGCATCCTTATAG 19919 Query 448 ATTTTAGTCTGTGGCAGATCACTTTGCCCATCGaaaaaaaGTCAGGATCGAAATTTTTGC 507 |||||||| |||| | |||||| ||| |||||||| | ||| ||| |||| Sbjct 19918 TATTTAGTCTCTGGCTGTCCACTTTTTACATAAGAAAAAAGTTAAAATCTAAAAATTTGA 19859 Query 508 GTTGCTATAGTTTGTGCTGATTAATTGTTATAAGT-------GAA--TATAA--TTAATT 556 || |||||||||||||||||||| || | |||| | ||| ||||| ||||| Sbjct 19858 GTCGCTATAGTTTGTGCTGATTATTTATAATAATTTTAAATAGAAATTATAAAGATAATT 19799 Query 557 AATAACA------------GTAAAATAAAGTATGAATTACTGTTATAATATACAATTTAG 604 |||| | |||| | | || || || |||| |||||| ||| || Sbjct 19798 GATAATAATCATAATACGCGTAATAAAGAGCATAAACTACTATTATAAAATATCAT---A 19742 Query 605 GaaaaaaaaGTACCGTAGAATT-AAATAAAATTTTGCAACTTCAAAATACCGTTCTGCTT 663 |||||||| | || | || ||| |||| ||| ||| |||| | |||||||||||| Sbjct 19741 CAAAAAAAAACAATTTAAATTTAAAAAAAAAAATTGTAACCTCAATAAACCGTTCTGCTT 19682 Query 664 ACAG----TAAACACAGTCGGTAGTCTGGCGCTCCGTTGACAACGGATTTGAACGGAACT 719 || | || ||||| ||||||||||||| |||| |||||||| | Sbjct 19681 ACGGTATATATACACACTCGGTAGTCTGGC------TTGA----------GAACGGAAAT 19638 Query 720 TGGCGCCAGATTCTACCGAATCTGTGGAT 748 ||||||||||||||||||||||||| ||| Sbjct 19637 TGGCGCCAGATTCTACCGAATCTGTTGAT 19609 Score = 109 bits (120), Expect = 5e-20 Identities = 65/68 (96%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 20246 AATCCGAATAAAAGCAGTTTCACTGTAAAAAAAATCGCGCTAAGTCCACGTTCATAAGAC 20305 Query 13356 TATTAAGA 13363 |||||||| Sbjct 20306 TATTAAGA 20313 >seq2222 Length=174721 Score = 174 bits (192), Expect = 1e-39 Identities = 273/392 (70%), Gaps = 49/392 (13%) Strand=Plus/Plus Query 388 AAATATCtttttttAACTGTAGTTTCCCATCTAATGAAGGATTACTATACATTCTCGAAT 447 |||||||||||||| |||||||||||||||||| | | ||||| || ||| || | Sbjct 170729 AAATATCTTTTTTTCACTGTAGTTTCCCATCTATTATAAGATTAGCATGCATCCTTATAG 170788 Query 448 ATTTTAGTCTGTGGCAGATCACTTTGCCCATCGaaaaaaaGTCAGGATCGAAATTTTTGC 507 |||||||| |||| | |||||| ||| |||||||| | ||| ||| | || Sbjct 170789 TATTTAGTCTCTGGCCGTCCACTTTTTACATAAGAAAAAAGTTAAAATCTAAAAATCTGA 170848 Query 508 GTTGCTATAGTTTGTGCTGATTAATTGTTATAA--GTGAATATAA---------TTAATT 556 || |||||||||||||||||||| || | |||| | ||||||| ||||| Sbjct 170849 GTCGCTATAGTTTGTGCTGATTATTTATAATAATTTTAAATATAAATTATAAATATAATT 170908 Query 557 AATAA-----CAGTAA-------AATAA--AGTATGAATTACTGTTATAATATACAATTT 602 |||| ||||| ||||| || ||||| |||| |||||| ||| | | Sbjct 170909 GATAATAATCAAGTAATACGCGTAATAAAGAGCATGAACTACTATTATAAAATATCA--T 170966 Query 603 AGGaaaaaaaaGTACCGTAGAATTAAATAAAATTTTGCAACTTCAAAATACCGTTCTGCT 662 | |||||||| | || | || || |||| |||| ||| |||||| ||||||||| | Sbjct 170967 ACAAAAAAAAATCAAATTAAATTTGAAAAAAAATTTGTAACCTCAAAAAACCGTTCTGTT 171026 Query 663 TACAG------TAAACACAGTCGGTAGTCTGGCGCTCCGTTGACAACGGATTTGAACGGA 716 ||| | || ||||| ||||||||||||| |||| ||||||| Sbjct 171027 TACGGTATATATATACACACTCGGTAGTCTGGC------TTGA----------GAACGGA 171070 Query 717 ACTTGGCGCCAGATTCTACCGAATCTGTGGAT 748 | |||||||||||||||||||| ||||| ||| Sbjct 171071 AATTGGCGCCAGATTCTACCGATTCTGTTGAT 171102 Score = 120 bits (132), Expect = 3e-23 Identities = 151/209 (72%), Gaps = 25/209 (12%) Strand=Plus/Plus Query 182 GAACGTGGACTTGGCGCGA-ttttttttacagtgaaactgtttttgttcggattttagta 240 ||| ||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct 170353 GAAGGTGGACTTGGCGCGATTTTTTTTTACAGTGAAACTGTTTTTATTC-------AGTG 170405 Query 241 ttttttgtaattataataaaaatttaCAATTGGTACCAACTTAAATCTCGCGTTGGCTGC 300 |||||||||||||| ||||||||| ||||| |||| || | | Sbjct 170406 TTTTTTGTAATTATGATAAAAATTGTCAATT---------TTAA--------TTTAATAC 170448 Query 301 ATTTTTTATAGCAAACTATCCCCTTGAAGCTACAGTTTATGTAAAAATAATTCCAGCGCA 360 |||| | ||||| |||||| || |||||| |||| |||||||| | |||| |||| Sbjct 170449 ATTTCCGGTGGCAAATTATCCCTTTTAAGCTATAGTTCATGTAAAAGTTATTCTTGCGCT 170508 Query 361 CCCTGGCAGGTGTAGACACAAGCTGTGAA 389 |||||| ||||| |||||||| || Sbjct 170509 GCCTGGCGTGTGTAATTGCAAGCTGTCAA 170537 Score = 105 bits (116), Expect = 6e-19 Identities = 64/68 (94%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 169840 AATCTGAACAAAAACAGTTTCACTGTAAAAAAAATTGCGCCAAGTCCACGTTCATAAAAC 169899 Query 13356 TATTAAGA 13363 ||||| || Sbjct 169900 TATTAGGA 169907 Score = 104 bits (114), Expect = 2e-18 Identities = 62/65 (95%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 170 TAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttc 229 ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 169904 TAATAGTTTTATGAACGTGGACTTGGCGCAATTTTTTTTACAGTGAAACTGTTTTTGTTC 169845 Query 230 ggatt 234 |||| Sbjct 169844 AGATT 169840 Score = 98.7 bits (108), Expect = 9e-17 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 13505 GAACGTATTTAGTGTGCGCGGTTGCAAAATATTTTACTTTTAATTAAATTCGTAAAATCT 13564 |||||||||||||||||| |||| | |||| ||| |||||| || |||||| |||||||| Sbjct 170071 GAACGTATTTAGTGTGCGTGGTTACGAAATTTTTCACTTTTTATGAAATTCCTAAAATCT 170130 Query 13565 ATTTACTAGGACTTTaaaaaaa 13586 | || |||||||||||||||| Sbjct 170131 TTCTAGTAGGACTTTAAAAAAA 170152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 43371751082520