Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_006655.1
Length=15279
Score E
Sequences producing significant alignments: (Bits) Value
seq2475 924 0.0
seq3261 269 3e-68
seq8078 253 2e-63
SEQ20740 215 5e-52
seq2707 167 2e-37
seq600 122 8e-24
>seq2475
Length=270261
Score = 924 bits (1024), Expect = 0.0
Identities = 731/886 (83%), Gaps = 34/886 (4%)
Strand=Plus/Minus
Query 3644 TCAACAACAGTCTCTCACGCAATCTTATCAGAATCAATGTATACCGACTAATGGAAATAA 3703
||||||||| | || ||| |||||||||||||||| | ||||||||||| ||||
Sbjct 45293 TCAACAACAATATCATACGTCGTCTTATCAGAATCAATATCTACCGACTAATCGAAAG-- 45236
Query 3704 CTTTGAACAAGACCTACTTAGGAAATCTGCAGAGCGTAACAATTACGAACAGCGACCTAA 3763
||||||||| || |||| ||||||||||||||| | |||||||| ||||| || |||||
Sbjct 45235 -TTTGAACAAAACTTACTAAGGAAATCTGCAGAGAGCAACAATTATGAACAACGTCCTAA 45177
Query 3764 CTCTCGGCCTATCAGAATGAGTACTCCATCTATCGGACAAAATTCAATTATCCCTTCCAG 3823
|||||| |||||| |||||||||||||||||| ||||||||||| ||| |||| |||||
Sbjct 45176 CTCTCGAACTATCAAAATGAGTACTCCATCTATTGGACAAAATTCTATTGTCCCGTCCAG 45117
Query 3824 TCCGTTGTATCAGACCTCCAAGCTTCCACAACAGAGACAGTCGCACCCATCTCAGCAAGA 3883
|||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 45116 TCCGTTGTATCAGATCTCCAAGCTTCCACAACAGAGACAGTCGCAGCTATCTCAGCAAGA 45057
Query 3884 CTCACAACGGCAACCACAGAAACCGAAAATACGTATTGGCACCTCTACCAAGCCACAAAA 3943
|||||||||||||||| | ||||||||||| || ||| || ||||||||||||| ||||
Sbjct 45056 CTCACAACGGCAACCATAAAAACCGAAAATGTGTGTTGACATCTCTACCAAGCCAAAAAA 44997
Query 3944 CAACCG---GCA-----------AACACCTACTTTTCAAGTCACAAAAGAAACGCTGTCA 3989
|||||| ||| |||||| ||||||||||| |||| ||||||||||
Sbjct 44996 CAACCGCTTGCAGGTTGTTTTTGGCTACCTACCTTTCAAGTCACGAAAGGAACGCTGTCA 44937
Query 3990 CCTATTCTTACGAAGGTTCTAAATTCGGTACGACAAGCACTATCAACTACTCATAACCAA 4049
|| |||||||| || |||||| ||||||||| |||||| ||||||| ||||||| ||||
Sbjct 44936 CCCATTCTTACAAAACTTCTAATTTCGGTACGGCAAGCATTATCAACAACTCATAGCCAA 44877
Query 4050 TATCTTCAGAACGAGCGGCAATTTCAGGGAAATCATAGT-AAACGTGCACCTGTTAATGA 4108
|||||||||||||| | ||||||||| |||||||||||| |||||||||| |||||||||
Sbjct 44876 TATCTTCAGAACGAACAGCAATTTCAAGGAAATCATAGTGAAACGTGCACTTGTTAATGA 44817
Query 4109 AAATCATCTGAGCCAAATTGACAATACATTGCAAACAGATGAGTGGATGGAAGAAGAAAC 4168
||||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 44816 AAATCATCTAAGCGAAATTGACAATACGTTGCAAACAGATGAGTGGATGAAAGAAGAAAC 44757
Query 4169 TCCGTCAGCGCATTATGGGGCAAATTCAGNNNNNNNNNNNNNNNNNNATCATGAAGTCAC 4228
||| ||||||||| | |||||| | |||| |||||||||| |
Sbjct 44756 TCCATCAGCGCATCACGGGGCAGACTCAGATTCCGATATTGGTACCGATCATGAAGTAAT 44697
Query 4229 TTCAGATCAGGAGATGTCTGCAGATGAAGCACCTGTTGAAAGAACGAATAACTTTTACGG 4288
|||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||
Sbjct 44696 CTCAGATCATGAGATGTCCGCAGATGAAGCACCTACTGAAACAACGAATAACTTTTACGA 44637
Query 4289 CCCTGGAATCAGTTCTGGAAGTAGCTCTGCAGACAGACCGATAGCTGCACAAAACTCTAC 4348
||||||||||| ||||||||| |||| | |||| ||||||||||||||||||||||| |
Sbjct 44636 CCCTGGAATCACTTCTGGAAGAAGCTGTACAGAAAGACCGATAGCTGCACAAAACTCCAA 44577
Query 4349 GATCCACCAGACGCATTCTAAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTAC 4408
|| |||||||||| |||||||| || || ||||| |||||||| |||||||| |||||
Sbjct 44576 GAACCACCAGACGTATTCTAAACTTGAGTTAGAGCAACAAATGTTGGATAACTTCGCTAC 44517
Query 4409 ACTCTTAACTCAAATGGGATCTACTTTGCGTTATACT----------------ACTGATA 4452
||||| ||||||||||| ||||||||||||||| || |||||||
Sbjct 44516 CCTCTTCACTCAAATGGGGTCTACTTTGCGTTATGCTACTGATACTAATACTGACTGATA 44457
Query 4453 TGTACAACACCCTACGAAGTTCAATCCTCGATACTGCCCAAACATA 4498
||||||||||| || ||| ||| ||||| || |||||| | |||||
Sbjct 44456 TGTACAACACCTTAGGAACTTCGATCCTTGACACTGCCGAGACATA 44411
Score = 686 bits (760), Expect = 0.0
Identities = 674/859 (78%), Gaps = 28/859 (3%)
Strand=Plus/Minus
Query 400 ACAACTTATCTCTTTGAAGACTATACGTAAATAAAAAGTAGAAGAAAT-TGGCTTATTTA 458
||||||||||| || ||||| || || | |||||||||||| ||| ||| |||| ||
Sbjct 46995 ACAACTTATCTATTCGAAGATTAAGCGGA--TAAAAAGTAGAAAAAAAATGGTTTATATA 46938
Query 459 TTAACAAGGAAAAA-AGATACTGATGGAAACATTTGGAATTTATATATAAAAGACATACA 517
|| || | |||||| ||||||||||||||| |||||||||| ||| || || | |||||
Sbjct 46937 TTCACGAAGAAAAAGAGATACTGATGGAAATATTTGGAATTCATACATGAAGTAGATACA 46878
Query 518 AGCATTAAAGCGGTAAGTTTTAGAACTAATTCTTATCAAGTAATATGCAAAT---GAGAC 574
|||| ||| |||| ||||||| | ||| ||| | ||| |||| | |||| || ||
Sbjct 46877 AGCACCAAAATGGTATGTTTTAGCATTAA--CTTTTGAAGCAATACGTAAATACTGATAC 46820
Query 575 CATAGAATAATAACAGGAAAACTCGACGCGGCCGGCTTGTGAACGGATGAGGCCCGACAG 634
|||||||||| |||||||| ||||||| || ||||||| ||| ||||| | |
Sbjct 46819 GATAGAATAATCGATGGAAAACTTCACGCGGCAGGTCTGTGAACCAATGGGGCCCACCCG 46760
Query 635 GGTGATAACTTGCCATAAACTGGCACGTGACTGGTGCTATGTT--GATAATATCGAATAA 692
||||||| | ||| | | |||| || ||| |||| || ||||||| | |
Sbjct 46759 GGTGATAGTTATTTATAGAAT--CACG---CTTTTGCGTTGTTTTGACGATATCGATTTA 46705
Query 693 GTTGGTATTTAAGGACGGGTTTTTACGTGTTTCAGATGATTCGTAGAAGGGACAATAATA 752
| ||||||| | | | ||||| ||||| |||||| ||| | | || |||
Sbjct 46704 CTCTGTATTTACGAAAGTATTTTTTTTTGTTTTAGATGAACCGTCATA---ATAACTATA 46648
Query 753 AGCGAGCATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGATTACG 812
|||||| || ||||| ||||| ||| |||| ||||||||||||||||||||||||||||
Sbjct 46647 GGCGAGCGTTTTATGTCGTTCAGTTCATAGACTTGCCTTTTGAAGGTATTGATGATTACG 46588
Query 813 TATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGACGGATCAGAAGTCTATTGTTG 872
|||||||||||| ||||||||||||||||||||| ||| || |||| ||||| ||||||
Sbjct 46587 TATGCGTGCCGTCCACTTGGCTGATAGTACGTAATGCGCCGTATCACAAGTCCGTTGTTG 46528
Query 873 CGTACCCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAACAAGGAGAGAT 932
|||||||||||| ||||||||||| ||||| ||||||||| || | ||||| |||
Sbjct 46527 CGTACCCTAAAGACGAAGATCCTTTCAACACCAGAGATCGCGTTAAAAGGAAGGAAAGAC 46468
Query 933 GCAATAACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGTGAGTTTGAAT 992
|||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||
Sbjct 46467 ACAATAACGAGTGGAGATTTTATGTGGCTATCGTCAAATATGAATCAGGTGAGTTTGAAT 46408
Query 993 CAATGTATTAGTTAA-TCGGTTGTGCGTAGTATTGTCGAAGTA----AATTCGGATCTAG 1047
|||||||||| |||| | ||||| || ||||||| || |||| ||| | ||||
Sbjct 46407 CAATGTATTATTTAATTTTGTTGTTCGCAGTATTGCCGCAGTATAGGTATTTGACCCTAG 46348
Query 1048 ATCATCTCAGAAATTGAGAGAAAGTAATAtttttttATNNTTTTCAGATAGTTACGGAGA 1107
|| ||||||||||||||||||||||||||| || | ||||||||||||||||||||
Sbjct 46347 ATAGTCTCAGAAATTGAGAGAAAGTAATATTATTAT----TTTTCAGATAGTTACGGAGA 46292
Query 1108 TGCAGAATATTGGATTGCGATGAGAAATGATAATGGACCTTCAGTAGAAAGAGAATTAAA 1167
|||||||||||||||||||| |||||||||| ||| ||||| || ||| |||||||||
Sbjct 46291 TGCAGAATATTGGATTGCGACGAGAAATGATTATGAACCTTTGGTGGAATAAGAATTAAA 46232
Query 1168 AACAACAGGTGAGAATTAAATCGCTTAAATAGTTCTAACGATCGAATTTTCATTGTAAAT 1227
||| |||||||||||| ||||| || | |||| ||| | | |||||||||| |||||
Sbjct 46231 AACGACAGGTGAGAATCAAATCATTTTATTAGTCTTAAAGTTTTAATTTTCATTCTAAAT 46172
Query 1228 TTATTTTCAGAAACCACTT 1246
||||||||||| |||||||
Sbjct 46171 TTATTTTCAGATACCACTT 46153
Score = 664 bits (736), Expect = 0.0
Identities = 519/623 (83%), Gaps = 15/623 (2%)
Strand=Plus/Minus
Query 2602 TTATTTTAAATTTCAAGCCTTCCAAATAATAACCAAACTTTTTATTTCCAGATATAGAAA 2661
|||||| |||||| |||| || |||||||| || |||| ||||||||| ||||
Sbjct 46154 TTATTTCAAATTTAAAGCTCTCGAAATAATAGTCAGCTTTTTCATTTCCAGACTCAGAAC 46095
Query 2662 CAGAGTTCTCGTTAAATAAGAAATTGCGTAATGCCAACCGAAACCATTCGTCGAAATTAG 2721
|| ||||| ||||||| ||||||||||| |||||||||||||||||| |||||| ||
Sbjct 46094 CAAAGTTCCCGTTAAACAAGAAATTGCGCGTTGCCAACCGAAACCATTCTTCGAAACTAA 46035
Query 2722 ATGATAATCCTCGGAAACCACTGCCAAAAATATTAATCAAGCGACCATCACTACCAGAAC 2781
||||||||| ||||||| |||| ||||||| || ||| ||||||||| ||||||||||||
Sbjct 46034 ATGATAATCATCGGAAAACACTCCCAAAAACATCAATTAAGCGACCAGCACTACCAGAAC 45975
Query 2782 CGAACAAACAACTTAATGAGAAACAGATGAAACTGGATGACGCTGCTCAGTCATCTGGCA 2841
| |||||||||||| ||| ||||| || |||||||||||||||||||||||||||| ||
Sbjct 45974 CAAACAAACAACTTGATGGGAAACGGAAGAAACTGGATGACGCTGCTCAGTCATCTAGCG 45915
Query 2842 CTATTGTTACCGACGCTAATGCAGAGCCTGGATCTTCAAGACAGGAACAATCGATTATAG 2901
|| |||||||||||||| ||||||||||||||||||||||||||||||| | |||| | |
Sbjct 45914 CTGTTGTTACCGACGCTGATGCAGAGCCTGGATCTTCAAGACAGGAACAGTAGATTTTCG 45855
Query 2902 CCCAGGACAACCAAACAATGGAATCTGCTCAGACAGGAACAACTGCTAGTGATTCTAACG 2961
| | |||||| ||| ||||| ||||||||||| |||||||||||| ||||||||||||||
Sbjct 45854 CACGGGACAAACAACCAATGAAATCTGCTCAGTCAGGAACAACTGTTAGTGATTCTAACG 45795
Query 2962 GTACATTGAGCTCCTCTCAGCGGAAAGATGAAAACCTCCAAGAATCATTACCAATACAAG 3021
|||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||
Sbjct 45794 GTACATCTAGCTCCTCTCAGCAGAAAGATGAAAACCTCCAAGAATTGTTACCAATAAAAG 45735
Query 3022 AGCAACAAGAATTGAGTAGGTCGTACATAAATGTAGCAACACCAGATACACCAACCTTTG 3081
|||| |||||||| |||| | | ||| || ||||||| ||||||||||||||| || |||
Sbjct 45734 AGCATCAAGAATTCAGTATGCCTTACGTAGATGTAGCTACACCAGATACACCAGCCCTTG 45675
Query 3082 TTATAGACGACAATGAAGAAGTCCAACCTACCAGTATTGAGGAACAGCAAGTACCTTCTT 3141
| ||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||
Sbjct 45674 TGATAGACGACGATGAAGAAGTCCAGCCTACCAGTATTGTAGAACAGCAAGTACCCTCTA 45615
Query 3142 ATCAAGCTATCTCACAATTTACGAAACAGTCGAAACCCGTCCAACAACCTCGAATTGTGG 3201
|||||||| ||||| ||||||| || |||||| |||| |
Sbjct 45614 ATCAAGCT---------------GAACAGCCGAAACCGATCTGGGAACCTCAAATTTCAG 45570
Query 3202 CGGCCCCATCAATAGAGATGACT 3224
||||| |||||||||||||||
Sbjct 45569 TAGCCCCGTCAATAGAGATGACT 45547
Score = 594 bits (658), Expect = 5e-166
Identities = 494/602 (82%), Gaps = 5/602 (1%)
Strand=Plus/Minus
Query 4651 ATCAACATAGTCGTGGTGATGCTAACAGAACGCCGAAAATAAAATACAACTCATGGCGTC 4710
||||||||||| | | ||||||||| | | ||||| | |||| |||||||| ||||
Sbjct 44405 ATCAACATAGTAATAGCGATGCTAACGAACCACCGAAGAAAAAACGCAACTCATCGCGTT 44346
Query 4711 TTGTTCTACCACCGGAATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAA 4770
|||||||| || || |||||||||||| |||||| | ||||||||||| ||||||||| |
Sbjct 44345 TTGTTCTAACATCGAAATATGATCCTCATGATACAAAATGGACATTGAGGTATCGAACCA 44286
Query 4771 ATCTGCCAGGACTCGTAGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACC 4830
||||||||||| | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 44285 ATCTGCCAGGAATTGTAAAACTTATGCCTCAAAGTGGTGTTTACGTTAGCTACGGAGACC 44226
Query 4831 TCAAATACTGTCAGCAAGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAG 4890
|||||||||||||||||||||||||||||||| |||||| | | ||||| ||| ||
Sbjct 44225 TCAAATACTGTCAGCAAGTATCAAAAGATTGCAAATCATAAACACTACGATTGTTAACAA 44166
Query 4891 CAGTATTTAACAGAAAAGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCAC 4950
||||||| |||||||||||| | ||||||||||| ||||||||||||| |||||||||
Sbjct 44165 CAGTATTCAACAGAAAAGCATTGAGTGTTTGTTTATCAATGACTGAGAGAGCGCAGGCTT 44106
Query 4951 CTGATAATGTTGTATCTAATATAAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGT 5010
|||||||||| ||||||| ||||||||||| ||||||| | |||||| |||||||||
Sbjct 44105 CTGATAATGTCCGATCTAATGCAAGGCCAGAATAAGATGATCACGCGTGTTCGGTACTGT 44046
Query 5011 TAAATTTCGTTTTAGAGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCC 5070
| |||||| ||||||| |||||||| |||||||||| |||||||| | ||||||||||
Sbjct 44045 TGAATTTCATTTTAGAACACGGACTAAAACGTGGTTGAAATACTGACTTGCAACCTATCC 43986
Query 5071 TCAGTACTTTACATTGTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAAT 5130
||| ||||||||| ||||||||||||||||||||||| ||| ||||| ||||| |||
Sbjct 43985 TCAATACTTTACACAATAAGATTCAAGAGATTCGGTTCAGATATGGTGTGTTGGTTGAAT 43926
Query 5131 GCTAACTATTGTGATTATGACTCATTAGTCATAAGTCAAGTTCTCTTATGTTTTCAATTA 5190
| |||||||| |||||| | | | | || | |||| |||| | | |||| | || |
Sbjct 43925 GTTAACTATTATGATTACCAATAACTGATCTTGAGTCGAGTTATATCATGTGCTAAAATC 43866
Query 5191 CTGAGGCTGAAAATCTTGCCATCTATTTATTGAAATTTAGTTATATTGTCAATCATTTTA 5250
|||||||| || ||||||| |||| ||| |||| | | || | |||||| ||||
Sbjct 43865 CTGAGGCT---AAGATTGCCATTTATTCATT--AATTCATTCATTTAATCAATCGCTTTA 43811
Query 5251 AT 5252
||
Sbjct 43810 AT 43809
>seq3261
Length=19281
Score = 269 bits (298), Expect = 3e-68
Identities = 253/328 (77%), Gaps = 25/328 (8%)
Strand=Plus/Plus
Query 11537 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATAAACAAAGTTT-TTTATCAAC 11595
||||||||||||||||||||||||||||||||||||||| || |||| |||||||
Sbjct 242 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAAT---TAATGTTTATTTATCACA 298
Query 11596 TTTATTGCAAATTATTAATTATCAATATACGCTGATGGGAAGatttattaactattaaca 11655
|||| ||| ||| ||||||| | ||||| ||||| | |||||||||||||||||||||
Sbjct 299 TTTA---CAACTTAATAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACA 355
Query 11656 cattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNN 11715
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 356 AATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACA 415
Query 11716 NNNNNNNNNNNNNNNNNTGGGAGGAAAGTATATT--TAGTAAAATAGTTTATAAGTATTT 11773
| | | |||| |||||| |||||||| |||||||||||||||
Sbjct 416 TTCAATAAATATTCATTTTGTA-GAAAATATATTTATAGTAAAACAGTTTATAAGTATTT 474
Query 11774 ATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTTTTTATGTCTG 11833
|||||||||||||||||||||| ||||||||||||| || ||| ||
Sbjct 475 ATTAATAGTTAACAAATATAGT--------------TATAATAAAATCTATTAATGGATG 520
Query 11834 AtttttttttCAACCCAGATATAGTTAT 11861
| |||||||||||||||||||||| |||
Sbjct 521 A-TTTTTTTTCAACCCAGATATAGGTAT 547
Score = 93.3 bits (102), Expect = 4e-15
Identities = 76/91 (84%), Gaps = 1/91 (1%)
Strand=Plus/Plus
Query 11356 TCGGCGCGCACGGGAACCGAACCTGGGACCTGACGCTTGAGAGACTAATTCATTACCTGT 11415
|||||| || | ||||||||||||||||||| || ||||| |||||||||| |||||| |
Sbjct 129 TCGGCGTGCGCAGGAACCGAACCTGGGACCTAACACTTGAAAGACTAATTCCTTACCTCT 188
Query 11416 TTACCAACGAGACTTGGTTGAAACG-AGAGT 11445
|||||||||| ||| ||||| | |||||
Sbjct 189 TTACCAACGAAGCTTCCATGAAAAGCAGAGT 219
>seq8078
Length=15557
Score = 253 bits (280), Expect = 2e-63
Identities = 199/246 (81%), Gaps = 5/246 (2%)
Strand=Plus/Minus
Query 11537 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATAAACAAAGTTTTTTATCAACT 11596
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 3935 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATTAACAAAGTTTTTTATCAAAT 3876
Query 11597 TTATTGCAAATTATTAATTATCAATATACGCTGATGGGAAGatttattaactattaacac 11656
|| |||| ||||||||||| | ||||| ||||| | |||||||||||||||||||||
Sbjct 3875 TT---GCAACTTATTAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACAA 3819
Query 11657 attaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNNN 11716
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3818 ATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACAT 3759
Query 11717 NNNNNNNNNNNNNNNNTGGGAGGAAAGT--ATATTTAGTAAAATAGTTTATAAGTATTTA 11774
| |||| ||||| || | |||||||||||||||||||||||||
Sbjct 3758 TCAATAAATATTCATTTTGGAGAAAAGTTCATTTGTAGTAAAATAGTTTATAAGTATTTA 3699
Query 11775 TTAATA 11780
||||||
Sbjct 3698 TTAATA 3693
Score = 122 bits (134), Expect = 8e-24
Identities = 78/84 (93%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 11778 ATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTTTTTATGTCTGAttt 11837
|||||||||||||||||||||||||||||||||||||||||| || || ||| ||| ||
Sbjct 629 ATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAAGCTATTAATGGATGA-TT 571
Query 11838 ttttttCAACCCAGATATAGTTAT 11861
||||||||||||||||||||||||
Sbjct 570 TTTTTTCAACCCAGATATAGTTAT 547
>SEQ20740
Length=2826
Score = 215 bits (238), Expect = 5e-52
Identities = 173/218 (79%), Gaps = 5/218 (2%)
Strand=Plus/Minus
Query 11649 attaacacattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNN 11708
||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2325 ATTAACAAATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAGATATTT 2266
Query 11709 NNNNNNNNNNNNNNNNNNNNNNNNTGGGAGGAAAGTATATT-----TAGTAAAATAGTTT 11763
| |||| |||||||||| ||||||||||||||
Sbjct 2265 GTTAACATTCAATAAATATTCATTTTGGAGAAAAGTATATTATTATTAGTAAAATAGTTT 2206
Query 11764 ATAAGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTT 11823
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205 ATAGGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTA 2146
Query 11824 TTTATGTCTGAtttttttttCAACCCAGATATAGTTAT 11861
|| ||| |||| ||||||||||||||||||| |||||
Sbjct 2145 TTAATGGATGATATTTTTTTCAACCCAGATATGGTTAT 2108
>seq2707
Length=98620
Score = 167 bits (184), Expect = 2e-37
Identities = 492/744 (66%), Gaps = 27/744 (4%)
Strand=Plus/Plus
Query 4381 AGCAGCAAATGTTAGATAACTTTGCTA-CACTCTTAACTCAAATGGGATCTACTTTGCGT 4439
||||||| || || || ||||| | ||| || |||||||||| |||||||| |
Sbjct 65614 AGCAGCATATTAAGGACAAATTTGCAAGCAC-CTCTGCTCAAATGGGTTCTACTTTAAGA 65672
Query 4440 TATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGATACTGCCCAAACATAT 4499
|||| | || ||| | | | | |||||| |||| | || || ||| ||||
Sbjct 65673 TATATGGTTAATGTGTTCGAGAACTTACGAACTTCAGTTCTTGAAGTTGCTGCGTCATAC 65732
Query 4500 AAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAGTGCAAAAATTAGCCAGCAATTCA 4559
||| ||||||| | | | | || ||| || |||| ||| ||| | ||
Sbjct 65733 CAAACGTTATTGGAAGATATGAAGGGGTTTAACATGCTGGAAAATCCAGCGAGCCAAGCA 65792
Query 4560 TCTTCTTCAAGCA--ACCGAACAGAAGAAGTCTCACAGTTGTCTGAAGAAAGACACATTG 4617
|| ||||||| | || | ||| ||||||| ||| | | |||||||||| | |||
Sbjct 65793 TCAACTTCAAGGAGTACGGCACA--AGAAGTCCCACTGGTTGCTGAAGAAAGGGAAATTT 65850
Query 4618 AAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTCGTGGTGATGCTAACA 4677
| | | | |||| | | || || | || ||| |||| || || | |||
Sbjct 65851 CCGCAACTGGGAGTTCAAATTTTAACGGT---AACCAAAATAGAAGTAACGACGTCAACG 65907
Query 4678 GAACGCCGAAAATAAAATACAACTC---ATGGCGTCTTGTTCTACCACCGGAATATGATC 4734
| | || ||| ||| ||| | || || ||| ||||||||||||| |||||||
Sbjct 65908 AAGCACCAGAAAGAAATCCCAATCCCAGATACCGGCTTATTCTACCACCGGAGTATGATC 65967
Query 4735 CTCGTGATACCAGATGGACATTGAAGTATC--GAACAAATCTGCCAGGACTCGTAGAACT 4792
|| |||||| |||||||| |||||||||| |||| || ||||||| |||||||||||
Sbjct 65968 CTAATGATACAAGATGGACCTTGAAGTATCATGAAC--ATATGCCAGGGCTCGTAGAACT 66025
Query 4793 TACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACTGTC-AGCAAGTAT 4851
|| |||||| | |||||| |||| |||| |||| || || || | || | || |
Sbjct 66026 TATGCCTCACACCAATGTTTATGTCAACTACAGAGAGCTGAAGTA-TATCGAAGAAACGT 66084
Query 4852 CAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTAACAGAAAAGCAC 4911
||| |||| |||||||||| ||| | || | ||| || | || |||| |
Sbjct 66085 CAACTAGTTGCGCATCATTAGCGCGACGAATTTTGCAGGAAGTCTTCAGCAAGGAAGCTC 66144
Query 4912 TAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAAT--GTTGTAT-CTA 4968
| ||||| |||| || ||||| || |||| || | |||| || | ||| ||
Sbjct 66145 TCAGTGTGTGTTCGTCGATGACCGAAAAAG-GC-----CTTGATCATAGCATTTATCCTG 66198
Query 4969 ATATAAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCGTTTTAGAGC 5028
|| |||||| ||||| |||| | | || || || | |||| | || | ||||
Sbjct 66199 ATGAGAGGCCAAAATTAAATGAACACGGATGCTTAGTCTTGCTCAATTACATTCTGGAGC 66258
Query 5029 ACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTTTACATTGTA 5088
||||||| |||||||| ||||| ||||| | || ||||||||| ||||| ||
Sbjct 66259 ACGGACTTCAACGTGGCTGGAAAACTGACATGCAGACTATCCTCAAAGGCTTACACGATA 66318
Query 5089 AGATTCAAGAGATTCGGTTCAAAT 5112
|| || || | || || |||| ||
Sbjct 66319 AGGTTAAAAAAATACGATTCAGAT 66342
Score = 165 bits (182), Expect = 8e-37
Identities = 276/396 (70%), Gaps = 9/396 (2%)
Strand=Plus/Plus
Query 760 ATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGATTACGTATGCGT 819
||||| ||| || || ||| ||||||| |||||| ||||||||||||||||||| || ||
Sbjct 63418 ATTCTGTGTGGTGCAGTTCATAGAATTACCTTTTAAAGGTATTGATGATTACGTGTGTGT 63477
Query 820 GCCGTACACTTGGCTGATAGTACGTAAAGCGA--CGGATCAGAAGTCTATTGTTGCGTAC 877
||| | ||||| || ||| |||| || ||||||||| |||| || |||
Sbjct 63478 ACCGGAGGGCTGGCTAGTAATAC--AAAGAGAACAGGATCAGAAAGTGGTTGTCGCATAC 63535
Query 878 CCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAACAAGGAGAGATGCAAT 937
|||| |||||||| ||||| || ||| ||||| | | | || | |||||||
Sbjct 63536 CCTATGAAAGAAGATCCCTTTGTTACAGGAGAACGCGTTATAAGAGAAGAAAAATGCAAT 63595
Query 938 AACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGTGAGTTTGAATCAATG 997
| | |||| || | ||||||| | |||||| || |||||| |||||| ||||||
Sbjct 63596 GATGGTTGGAAGTTCTGGATGGCTGAACTAAAATATCAATCAGGTGCGTTTGATTCAATG 63655
Query 998 TATTAGTTAATCGGTTGTGCGTAGTATTGTCGAAGTAAATTCGGATCTAGATCATCTCAG 1057
|||||||| ||| | ||||||| || | || ||| || | | ||||
Sbjct 63656 AATTAGTTA----GTTAGAATTTGTATTGTTAAAAAATTTTTAGATTTATAATACTTCAG 63711
Query 1058 AAATTGAGAGAAAGTAATAt-ttttttATNNTTTTCAGATAGTTACGGAGATGCAGAATA 1116
|||| || || || |||| | | | || |||| |||||||| | ||||||| | |
Sbjct 63712 AAATCGATAGCAAATAATTTATGGATAATTTTTTTTAGATAGTTTCAAAGATGCAAATTT 63771
Query 1117 TTGGATTGCGATGAGAAATGATAATGGACCTTCAGT 1152
|||||| || | ||| |||||| || | ||||| ||
Sbjct 63772 TTGGATAGCTACGAGGAATGATTATAGGCCTTCCGT 63807
>seq600
Length=1111
Score = 122 bits (134), Expect = 8e-24
Identities = 85/93 (91%), Gaps = 4/93 (4%)
Strand=Plus/Minus
Query 11736 GAGGAAAGTATATTTA--GTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 11793
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 GAGAAAAGTATATTTATAGTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 508
Query 11794 GTTAT-ATCTGGCCAGATATAATAAAATCTTTT 11825
||||| || | |||||||||||||||||| ||
Sbjct 507 GTTATTATATA-CCAGATATAATAAAATCTATT 476
Score = 104 bits (114), Expect = 2e-18
Identities = 57/57 (100%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 11128 TCCCGGGAAAAACGGATTAGATCTGGCCAGATCTTTAAATTGTCTCTATCTGACGAG 11184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 TCCCGGGAAAAACGGATTAGATCTGGCCAGATCTTTAAATTGTCTCTATCTGACGAG 607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 48751639380514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |