Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_006655.1 Length=15279 Score E Sequences producing significant alignments: (Bits) Value seq2475 924 0.0 seq3261 269 3e-68 seq8078 253 2e-63 SEQ20740 215 5e-52 seq2707 167 2e-37 seq600 122 8e-24 >seq2475 Length=270261 Score = 924 bits (1024), Expect = 0.0 Identities = 731/886 (83%), Gaps = 34/886 (4%) Strand=Plus/Minus Query 3644 TCAACAACAGTCTCTCACGCAATCTTATCAGAATCAATGTATACCGACTAATGGAAATAA 3703 ||||||||| | || ||| |||||||||||||||| | ||||||||||| |||| Sbjct 45293 TCAACAACAATATCATACGTCGTCTTATCAGAATCAATATCTACCGACTAATCGAAAG-- 45236 Query 3704 CTTTGAACAAGACCTACTTAGGAAATCTGCAGAGCGTAACAATTACGAACAGCGACCTAA 3763 ||||||||| || |||| ||||||||||||||| | |||||||| ||||| || ||||| Sbjct 45235 -TTTGAACAAAACTTACTAAGGAAATCTGCAGAGAGCAACAATTATGAACAACGTCCTAA 45177 Query 3764 CTCTCGGCCTATCAGAATGAGTACTCCATCTATCGGACAAAATTCAATTATCCCTTCCAG 3823 |||||| |||||| |||||||||||||||||| ||||||||||| ||| |||| ||||| Sbjct 45176 CTCTCGAACTATCAAAATGAGTACTCCATCTATTGGACAAAATTCTATTGTCCCGTCCAG 45117 Query 3824 TCCGTTGTATCAGACCTCCAAGCTTCCACAACAGAGACAGTCGCACCCATCTCAGCAAGA 3883 |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| Sbjct 45116 TCCGTTGTATCAGATCTCCAAGCTTCCACAACAGAGACAGTCGCAGCTATCTCAGCAAGA 45057 Query 3884 CTCACAACGGCAACCACAGAAACCGAAAATACGTATTGGCACCTCTACCAAGCCACAAAA 3943 |||||||||||||||| | ||||||||||| || ||| || ||||||||||||| |||| Sbjct 45056 CTCACAACGGCAACCATAAAAACCGAAAATGTGTGTTGACATCTCTACCAAGCCAAAAAA 44997 Query 3944 CAACCG---GCA-----------AACACCTACTTTTCAAGTCACAAAAGAAACGCTGTCA 3989 |||||| ||| |||||| ||||||||||| |||| |||||||||| Sbjct 44996 CAACCGCTTGCAGGTTGTTTTTGGCTACCTACCTTTCAAGTCACGAAAGGAACGCTGTCA 44937 Query 3990 CCTATTCTTACGAAGGTTCTAAATTCGGTACGACAAGCACTATCAACTACTCATAACCAA 4049 || |||||||| || |||||| ||||||||| |||||| ||||||| ||||||| |||| Sbjct 44936 CCCATTCTTACAAAACTTCTAATTTCGGTACGGCAAGCATTATCAACAACTCATAGCCAA 44877 Query 4050 TATCTTCAGAACGAGCGGCAATTTCAGGGAAATCATAGT-AAACGTGCACCTGTTAATGA 4108 |||||||||||||| | ||||||||| |||||||||||| |||||||||| ||||||||| Sbjct 44876 TATCTTCAGAACGAACAGCAATTTCAAGGAAATCATAGTGAAACGTGCACTTGTTAATGA 44817 Query 4109 AAATCATCTGAGCCAAATTGACAATACATTGCAAACAGATGAGTGGATGGAAGAAGAAAC 4168 ||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 44816 AAATCATCTAAGCGAAATTGACAATACGTTGCAAACAGATGAGTGGATGAAAGAAGAAAC 44757 Query 4169 TCCGTCAGCGCATTATGGGGCAAATTCAGNNNNNNNNNNNNNNNNNNATCATGAAGTCAC 4228 ||| ||||||||| | |||||| | |||| |||||||||| | Sbjct 44756 TCCATCAGCGCATCACGGGGCAGACTCAGATTCCGATATTGGTACCGATCATGAAGTAAT 44697 Query 4229 TTCAGATCAGGAGATGTCTGCAGATGAAGCACCTGTTGAAAGAACGAATAACTTTTACGG 4288 |||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||| Sbjct 44696 CTCAGATCATGAGATGTCCGCAGATGAAGCACCTACTGAAACAACGAATAACTTTTACGA 44637 Query 4289 CCCTGGAATCAGTTCTGGAAGTAGCTCTGCAGACAGACCGATAGCTGCACAAAACTCTAC 4348 ||||||||||| ||||||||| |||| | |||| ||||||||||||||||||||||| | Sbjct 44636 CCCTGGAATCACTTCTGGAAGAAGCTGTACAGAAAGACCGATAGCTGCACAAAACTCCAA 44577 Query 4349 GATCCACCAGACGCATTCTAAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTAC 4408 || |||||||||| |||||||| || || ||||| |||||||| |||||||| ||||| Sbjct 44576 GAACCACCAGACGTATTCTAAACTTGAGTTAGAGCAACAAATGTTGGATAACTTCGCTAC 44517 Query 4409 ACTCTTAACTCAAATGGGATCTACTTTGCGTTATACT----------------ACTGATA 4452 ||||| ||||||||||| ||||||||||||||| || ||||||| Sbjct 44516 CCTCTTCACTCAAATGGGGTCTACTTTGCGTTATGCTACTGATACTAATACTGACTGATA 44457 Query 4453 TGTACAACACCCTACGAAGTTCAATCCTCGATACTGCCCAAACATA 4498 ||||||||||| || ||| ||| ||||| || |||||| | ||||| Sbjct 44456 TGTACAACACCTTAGGAACTTCGATCCTTGACACTGCCGAGACATA 44411 Score = 686 bits (760), Expect = 0.0 Identities = 674/859 (78%), Gaps = 28/859 (3%) Strand=Plus/Minus Query 400 ACAACTTATCTCTTTGAAGACTATACGTAAATAAAAAGTAGAAGAAAT-TGGCTTATTTA 458 ||||||||||| || ||||| || || | |||||||||||| ||| ||| |||| || Sbjct 46995 ACAACTTATCTATTCGAAGATTAAGCGGA--TAAAAAGTAGAAAAAAAATGGTTTATATA 46938 Query 459 TTAACAAGGAAAAA-AGATACTGATGGAAACATTTGGAATTTATATATAAAAGACATACA 517 || || | |||||| ||||||||||||||| |||||||||| ||| || || | ||||| Sbjct 46937 TTCACGAAGAAAAAGAGATACTGATGGAAATATTTGGAATTCATACATGAAGTAGATACA 46878 Query 518 AGCATTAAAGCGGTAAGTTTTAGAACTAATTCTTATCAAGTAATATGCAAAT---GAGAC 574 |||| ||| |||| ||||||| | ||| ||| | ||| |||| | |||| || || Sbjct 46877 AGCACCAAAATGGTATGTTTTAGCATTAA--CTTTTGAAGCAATACGTAAATACTGATAC 46820 Query 575 CATAGAATAATAACAGGAAAACTCGACGCGGCCGGCTTGTGAACGGATGAGGCCCGACAG 634 |||||||||| |||||||| ||||||| || ||||||| ||| ||||| | | Sbjct 46819 GATAGAATAATCGATGGAAAACTTCACGCGGCAGGTCTGTGAACCAATGGGGCCCACCCG 46760 Query 635 GGTGATAACTTGCCATAAACTGGCACGTGACTGGTGCTATGTT--GATAATATCGAATAA 692 ||||||| | ||| | | |||| || ||| |||| || ||||||| | | Sbjct 46759 GGTGATAGTTATTTATAGAAT--CACG---CTTTTGCGTTGTTTTGACGATATCGATTTA 46705 Query 693 GTTGGTATTTAAGGACGGGTTTTTACGTGTTTCAGATGATTCGTAGAAGGGACAATAATA 752 | ||||||| | | | ||||| ||||| |||||| ||| | | || ||| Sbjct 46704 CTCTGTATTTACGAAAGTATTTTTTTTTGTTTTAGATGAACCGTCATA---ATAACTATA 46648 Query 753 AGCGAGCATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGATTACG 812 |||||| || ||||| ||||| ||| |||| |||||||||||||||||||||||||||| Sbjct 46647 GGCGAGCGTTTTATGTCGTTCAGTTCATAGACTTGCCTTTTGAAGGTATTGATGATTACG 46588 Query 813 TATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGACGGATCAGAAGTCTATTGTTG 872 |||||||||||| ||||||||||||||||||||| ||| || |||| ||||| |||||| Sbjct 46587 TATGCGTGCCGTCCACTTGGCTGATAGTACGTAATGCGCCGTATCACAAGTCCGTTGTTG 46528 Query 873 CGTACCCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAACAAGGAGAGAT 932 |||||||||||| ||||||||||| ||||| ||||||||| || | ||||| ||| Sbjct 46527 CGTACCCTAAAGACGAAGATCCTTTCAACACCAGAGATCGCGTTAAAAGGAAGGAAAGAC 46468 Query 933 GCAATAACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGTGAGTTTGAAT 992 |||||||||||||||||||| | ||||| ||||||||||| ||||||||||||||| Sbjct 46467 ACAATAACGAGTGGAGATTTTATGTGGCTATCGTCAAATATGAATCAGGTGAGTTTGAAT 46408 Query 993 CAATGTATTAGTTAA-TCGGTTGTGCGTAGTATTGTCGAAGTA----AATTCGGATCTAG 1047 |||||||||| |||| | ||||| || ||||||| || |||| ||| | |||| Sbjct 46407 CAATGTATTATTTAATTTTGTTGTTCGCAGTATTGCCGCAGTATAGGTATTTGACCCTAG 46348 Query 1048 ATCATCTCAGAAATTGAGAGAAAGTAATAtttttttATNNTTTTCAGATAGTTACGGAGA 1107 || ||||||||||||||||||||||||||| || | |||||||||||||||||||| Sbjct 46347 ATAGTCTCAGAAATTGAGAGAAAGTAATATTATTAT----TTTTCAGATAGTTACGGAGA 46292 Query 1108 TGCAGAATATTGGATTGCGATGAGAAATGATAATGGACCTTCAGTAGAAAGAGAATTAAA 1167 |||||||||||||||||||| |||||||||| ||| ||||| || ||| ||||||||| Sbjct 46291 TGCAGAATATTGGATTGCGACGAGAAATGATTATGAACCTTTGGTGGAATAAGAATTAAA 46232 Query 1168 AACAACAGGTGAGAATTAAATCGCTTAAATAGTTCTAACGATCGAATTTTCATTGTAAAT 1227 ||| |||||||||||| ||||| || | |||| ||| | | |||||||||| ||||| Sbjct 46231 AACGACAGGTGAGAATCAAATCATTTTATTAGTCTTAAAGTTTTAATTTTCATTCTAAAT 46172 Query 1228 TTATTTTCAGAAACCACTT 1246 ||||||||||| ||||||| Sbjct 46171 TTATTTTCAGATACCACTT 46153 Score = 664 bits (736), Expect = 0.0 Identities = 519/623 (83%), Gaps = 15/623 (2%) Strand=Plus/Minus Query 2602 TTATTTTAAATTTCAAGCCTTCCAAATAATAACCAAACTTTTTATTTCCAGATATAGAAA 2661 |||||| |||||| |||| || |||||||| || |||| ||||||||| |||| Sbjct 46154 TTATTTCAAATTTAAAGCTCTCGAAATAATAGTCAGCTTTTTCATTTCCAGACTCAGAAC 46095 Query 2662 CAGAGTTCTCGTTAAATAAGAAATTGCGTAATGCCAACCGAAACCATTCGTCGAAATTAG 2721 || ||||| ||||||| ||||||||||| |||||||||||||||||| |||||| || Sbjct 46094 CAAAGTTCCCGTTAAACAAGAAATTGCGCGTTGCCAACCGAAACCATTCTTCGAAACTAA 46035 Query 2722 ATGATAATCCTCGGAAACCACTGCCAAAAATATTAATCAAGCGACCATCACTACCAGAAC 2781 ||||||||| ||||||| |||| ||||||| || ||| ||||||||| |||||||||||| Sbjct 46034 ATGATAATCATCGGAAAACACTCCCAAAAACATCAATTAAGCGACCAGCACTACCAGAAC 45975 Query 2782 CGAACAAACAACTTAATGAGAAACAGATGAAACTGGATGACGCTGCTCAGTCATCTGGCA 2841 | |||||||||||| ||| ||||| || |||||||||||||||||||||||||||| || Sbjct 45974 CAAACAAACAACTTGATGGGAAACGGAAGAAACTGGATGACGCTGCTCAGTCATCTAGCG 45915 Query 2842 CTATTGTTACCGACGCTAATGCAGAGCCTGGATCTTCAAGACAGGAACAATCGATTATAG 2901 || |||||||||||||| ||||||||||||||||||||||||||||||| | |||| | | Sbjct 45914 CTGTTGTTACCGACGCTGATGCAGAGCCTGGATCTTCAAGACAGGAACAGTAGATTTTCG 45855 Query 2902 CCCAGGACAACCAAACAATGGAATCTGCTCAGACAGGAACAACTGCTAGTGATTCTAACG 2961 | | |||||| ||| ||||| ||||||||||| |||||||||||| |||||||||||||| Sbjct 45854 CACGGGACAAACAACCAATGAAATCTGCTCAGTCAGGAACAACTGTTAGTGATTCTAACG 45795 Query 2962 GTACATTGAGCTCCTCTCAGCGGAAAGATGAAAACCTCCAAGAATCATTACCAATACAAG 3021 |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||| Sbjct 45794 GTACATCTAGCTCCTCTCAGCAGAAAGATGAAAACCTCCAAGAATTGTTACCAATAAAAG 45735 Query 3022 AGCAACAAGAATTGAGTAGGTCGTACATAAATGTAGCAACACCAGATACACCAACCTTTG 3081 |||| |||||||| |||| | | ||| || ||||||| ||||||||||||||| || ||| Sbjct 45734 AGCATCAAGAATTCAGTATGCCTTACGTAGATGTAGCTACACCAGATACACCAGCCCTTG 45675 Query 3082 TTATAGACGACAATGAAGAAGTCCAACCTACCAGTATTGAGGAACAGCAAGTACCTTCTT 3141 | ||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct 45674 TGATAGACGACGATGAAGAAGTCCAGCCTACCAGTATTGTAGAACAGCAAGTACCCTCTA 45615 Query 3142 ATCAAGCTATCTCACAATTTACGAAACAGTCGAAACCCGTCCAACAACCTCGAATTGTGG 3201 |||||||| ||||| ||||||| || |||||| |||| | Sbjct 45614 ATCAAGCT---------------GAACAGCCGAAACCGATCTGGGAACCTCAAATTTCAG 45570 Query 3202 CGGCCCCATCAATAGAGATGACT 3224 ||||| ||||||||||||||| Sbjct 45569 TAGCCCCGTCAATAGAGATGACT 45547 Score = 594 bits (658), Expect = 5e-166 Identities = 494/602 (82%), Gaps = 5/602 (1%) Strand=Plus/Minus Query 4651 ATCAACATAGTCGTGGTGATGCTAACAGAACGCCGAAAATAAAATACAACTCATGGCGTC 4710 ||||||||||| | | ||||||||| | | ||||| | |||| |||||||| |||| Sbjct 44405 ATCAACATAGTAATAGCGATGCTAACGAACCACCGAAGAAAAAACGCAACTCATCGCGTT 44346 Query 4711 TTGTTCTACCACCGGAATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAA 4770 |||||||| || || |||||||||||| |||||| | ||||||||||| ||||||||| | Sbjct 44345 TTGTTCTAACATCGAAATATGATCCTCATGATACAAAATGGACATTGAGGTATCGAACCA 44286 Query 4771 ATCTGCCAGGACTCGTAGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACC 4830 ||||||||||| | ||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 44285 ATCTGCCAGGAATTGTAAAACTTATGCCTCAAAGTGGTGTTTACGTTAGCTACGGAGACC 44226 Query 4831 TCAAATACTGTCAGCAAGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAG 4890 |||||||||||||||||||||||||||||||| |||||| | | ||||| ||| || Sbjct 44225 TCAAATACTGTCAGCAAGTATCAAAAGATTGCAAATCATAAACACTACGATTGTTAACAA 44166 Query 4891 CAGTATTTAACAGAAAAGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCAC 4950 ||||||| |||||||||||| | ||||||||||| ||||||||||||| ||||||||| Sbjct 44165 CAGTATTCAACAGAAAAGCATTGAGTGTTTGTTTATCAATGACTGAGAGAGCGCAGGCTT 44106 Query 4951 CTGATAATGTTGTATCTAATATAAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGT 5010 |||||||||| ||||||| ||||||||||| ||||||| | |||||| ||||||||| Sbjct 44105 CTGATAATGTCCGATCTAATGCAAGGCCAGAATAAGATGATCACGCGTGTTCGGTACTGT 44046 Query 5011 TAAATTTCGTTTTAGAGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCC 5070 | |||||| ||||||| |||||||| |||||||||| |||||||| | |||||||||| Sbjct 44045 TGAATTTCATTTTAGAACACGGACTAAAACGTGGTTGAAATACTGACTTGCAACCTATCC 43986 Query 5071 TCAGTACTTTACATTGTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAAT 5130 ||| ||||||||| ||||||||||||||||||||||| ||| ||||| ||||| ||| Sbjct 43985 TCAATACTTTACACAATAAGATTCAAGAGATTCGGTTCAGATATGGTGTGTTGGTTGAAT 43926 Query 5131 GCTAACTATTGTGATTATGACTCATTAGTCATAAGTCAAGTTCTCTTATGTTTTCAATTA 5190 | |||||||| |||||| | | | | || | |||| |||| | | |||| | || | Sbjct 43925 GTTAACTATTATGATTACCAATAACTGATCTTGAGTCGAGTTATATCATGTGCTAAAATC 43866 Query 5191 CTGAGGCTGAAAATCTTGCCATCTATTTATTGAAATTTAGTTATATTGTCAATCATTTTA 5250 |||||||| || ||||||| |||| ||| |||| | | || | |||||| |||| Sbjct 43865 CTGAGGCT---AAGATTGCCATTTATTCATT--AATTCATTCATTTAATCAATCGCTTTA 43811 Query 5251 AT 5252 || Sbjct 43810 AT 43809 >seq3261 Length=19281 Score = 269 bits (298), Expect = 3e-68 Identities = 253/328 (77%), Gaps = 25/328 (8%) Strand=Plus/Plus Query 11537 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATAAACAAAGTTT-TTTATCAAC 11595 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| Sbjct 242 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAAT---TAATGTTTATTTATCACA 298 Query 11596 TTTATTGCAAATTATTAATTATCAATATACGCTGATGGGAAGatttattaactattaaca 11655 |||| ||| ||| ||||||| | ||||| ||||| | ||||||||||||||||||||| Sbjct 299 TTTA---CAACTTAATAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACA 355 Query 11656 cattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNN 11715 ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 356 AATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACA 415 Query 11716 NNNNNNNNNNNNNNNNNTGGGAGGAAAGTATATT--TAGTAAAATAGTTTATAAGTATTT 11773 | | | |||| |||||| |||||||| ||||||||||||||| Sbjct 416 TTCAATAAATATTCATTTTGTA-GAAAATATATTTATAGTAAAACAGTTTATAAGTATTT 474 Query 11774 ATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTTTTTATGTCTG 11833 |||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 475 ATTAATAGTTAACAAATATAGT--------------TATAATAAAATCTATTAATGGATG 520 Query 11834 AtttttttttCAACCCAGATATAGTTAT 11861 | |||||||||||||||||||||| ||| Sbjct 521 A-TTTTTTTTCAACCCAGATATAGGTAT 547 Score = 93.3 bits (102), Expect = 4e-15 Identities = 76/91 (84%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 11356 TCGGCGCGCACGGGAACCGAACCTGGGACCTGACGCTTGAGAGACTAATTCATTACCTGT 11415 |||||| || | ||||||||||||||||||| || ||||| |||||||||| |||||| | Sbjct 129 TCGGCGTGCGCAGGAACCGAACCTGGGACCTAACACTTGAAAGACTAATTCCTTACCTCT 188 Query 11416 TTACCAACGAGACTTGGTTGAAACG-AGAGT 11445 |||||||||| ||| ||||| | ||||| Sbjct 189 TTACCAACGAAGCTTCCATGAAAAGCAGAGT 219 >seq8078 Length=15557 Score = 253 bits (280), Expect = 2e-63 Identities = 199/246 (81%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 11537 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATAAACAAAGTTTTTTATCAACT 11596 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 3935 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATTAACAAAGTTTTTTATCAAAT 3876 Query 11597 TTATTGCAAATTATTAATTATCAATATACGCTGATGGGAAGatttattaactattaacac 11656 || |||| ||||||||||| | ||||| ||||| | ||||||||||||||||||||| Sbjct 3875 TT---GCAACTTATTAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACAA 3819 Query 11657 attaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNNN 11716 ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3818 ATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACAT 3759 Query 11717 NNNNNNNNNNNNNNNNTGGGAGGAAAGT--ATATTTAGTAAAATAGTTTATAAGTATTTA 11774 | |||| ||||| || | ||||||||||||||||||||||||| Sbjct 3758 TCAATAAATATTCATTTTGGAGAAAAGTTCATTTGTAGTAAAATAGTTTATAAGTATTTA 3699 Query 11775 TTAATA 11780 |||||| Sbjct 3698 TTAATA 3693 Score = 122 bits (134), Expect = 8e-24 Identities = 78/84 (93%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11778 ATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTTTTTATGTCTGAttt 11837 |||||||||||||||||||||||||||||||||||||||||| || || ||| ||| || Sbjct 629 ATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAAGCTATTAATGGATGA-TT 571 Query 11838 ttttttCAACCCAGATATAGTTAT 11861 |||||||||||||||||||||||| Sbjct 570 TTTTTTCAACCCAGATATAGTTAT 547 >SEQ20740 Length=2826 Score = 215 bits (238), Expect = 5e-52 Identities = 173/218 (79%), Gaps = 5/218 (2%) Strand=Plus/Minus Query 11649 attaacacattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNN 11708 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 2325 ATTAACAAATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAGATATTT 2266 Query 11709 NNNNNNNNNNNNNNNNNNNNNNNNTGGGAGGAAAGTATATT-----TAGTAAAATAGTTT 11763 | |||| |||||||||| |||||||||||||| Sbjct 2265 GTTAACATTCAATAAATATTCATTTTGGAGAAAAGTATATTATTATTAGTAAAATAGTTT 2206 Query 11764 ATAAGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTT 11823 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2205 ATAGGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCCAGATATAATAAAATCTA 2146 Query 11824 TTTATGTCTGAtttttttttCAACCCAGATATAGTTAT 11861 || ||| |||| ||||||||||||||||||| ||||| Sbjct 2145 TTAATGGATGATATTTTTTTCAACCCAGATATGGTTAT 2108 >seq2707 Length=98620 Score = 167 bits (184), Expect = 2e-37 Identities = 492/744 (66%), Gaps = 27/744 (4%) Strand=Plus/Plus Query 4381 AGCAGCAAATGTTAGATAACTTTGCTA-CACTCTTAACTCAAATGGGATCTACTTTGCGT 4439 ||||||| || || || ||||| | ||| || |||||||||| |||||||| | Sbjct 65614 AGCAGCATATTAAGGACAAATTTGCAAGCAC-CTCTGCTCAAATGGGTTCTACTTTAAGA 65672 Query 4440 TATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGATACTGCCCAAACATAT 4499 |||| | || ||| | | | | |||||| |||| | || || ||| |||| Sbjct 65673 TATATGGTTAATGTGTTCGAGAACTTACGAACTTCAGTTCTTGAAGTTGCTGCGTCATAC 65732 Query 4500 AAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAGTGCAAAAATTAGCCAGCAATTCA 4559 ||| ||||||| | | | | || ||| || |||| ||| ||| | || Sbjct 65733 CAAACGTTATTGGAAGATATGAAGGGGTTTAACATGCTGGAAAATCCAGCGAGCCAAGCA 65792 Query 4560 TCTTCTTCAAGCA--ACCGAACAGAAGAAGTCTCACAGTTGTCTGAAGAAAGACACATTG 4617 || ||||||| | || | ||| ||||||| ||| | | |||||||||| | ||| Sbjct 65793 TCAACTTCAAGGAGTACGGCACA--AGAAGTCCCACTGGTTGCTGAAGAAAGGGAAATTT 65850 Query 4618 AAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTCGTGGTGATGCTAACA 4677 | | | | |||| | | || || | || ||| |||| || || | ||| Sbjct 65851 CCGCAACTGGGAGTTCAAATTTTAACGGT---AACCAAAATAGAAGTAACGACGTCAACG 65907 Query 4678 GAACGCCGAAAATAAAATACAACTC---ATGGCGTCTTGTTCTACCACCGGAATATGATC 4734 | | || ||| ||| ||| | || || ||| ||||||||||||| ||||||| Sbjct 65908 AAGCACCAGAAAGAAATCCCAATCCCAGATACCGGCTTATTCTACCACCGGAGTATGATC 65967 Query 4735 CTCGTGATACCAGATGGACATTGAAGTATC--GAACAAATCTGCCAGGACTCGTAGAACT 4792 || |||||| |||||||| |||||||||| |||| || ||||||| ||||||||||| Sbjct 65968 CTAATGATACAAGATGGACCTTGAAGTATCATGAAC--ATATGCCAGGGCTCGTAGAACT 66025 Query 4793 TACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACTGTC-AGCAAGTAT 4851 || |||||| | |||||| |||| |||| |||| || || || | || | || | Sbjct 66026 TATGCCTCACACCAATGTTTATGTCAACTACAGAGAGCTGAAGTA-TATCGAAGAAACGT 66084 Query 4852 CAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTAACAGAAAAGCAC 4911 ||| |||| |||||||||| ||| | || | ||| || | || |||| | Sbjct 66085 CAACTAGTTGCGCATCATTAGCGCGACGAATTTTGCAGGAAGTCTTCAGCAAGGAAGCTC 66144 Query 4912 TAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAAT--GTTGTAT-CTA 4968 | ||||| |||| || ||||| || |||| || | |||| || | ||| || Sbjct 66145 TCAGTGTGTGTTCGTCGATGACCGAAAAAG-GC-----CTTGATCATAGCATTTATCCTG 66198 Query 4969 ATATAAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCGTTTTAGAGC 5028 || |||||| ||||| |||| | | || || || | |||| | || | |||| Sbjct 66199 ATGAGAGGCCAAAATTAAATGAACACGGATGCTTAGTCTTGCTCAATTACATTCTGGAGC 66258 Query 5029 ACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTTTACATTGTA 5088 ||||||| |||||||| ||||| ||||| | || ||||||||| ||||| || Sbjct 66259 ACGGACTTCAACGTGGCTGGAAAACTGACATGCAGACTATCCTCAAAGGCTTACACGATA 66318 Query 5089 AGATTCAAGAGATTCGGTTCAAAT 5112 || || || | || || |||| || Sbjct 66319 AGGTTAAAAAAATACGATTCAGAT 66342 Score = 165 bits (182), Expect = 8e-37 Identities = 276/396 (70%), Gaps = 9/396 (2%) Strand=Plus/Plus Query 760 ATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGATTACGTATGCGT 819 ||||| ||| || || ||| ||||||| |||||| ||||||||||||||||||| || || Sbjct 63418 ATTCTGTGTGGTGCAGTTCATAGAATTACCTTTTAAAGGTATTGATGATTACGTGTGTGT 63477 Query 820 GCCGTACACTTGGCTGATAGTACGTAAAGCGA--CGGATCAGAAGTCTATTGTTGCGTAC 877 ||| | ||||| || ||| |||| || ||||||||| |||| || ||| Sbjct 63478 ACCGGAGGGCTGGCTAGTAATAC--AAAGAGAACAGGATCAGAAAGTGGTTGTCGCATAC 63535 Query 878 CCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAACAAGGAGAGATGCAAT 937 |||| |||||||| ||||| || ||| ||||| | | | || | ||||||| Sbjct 63536 CCTATGAAAGAAGATCCCTTTGTTACAGGAGAACGCGTTATAAGAGAAGAAAAATGCAAT 63595 Query 938 AACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGTGAGTTTGAATCAATG 997 | | |||| || | ||||||| | |||||| || |||||| |||||| |||||| Sbjct 63596 GATGGTTGGAAGTTCTGGATGGCTGAACTAAAATATCAATCAGGTGCGTTTGATTCAATG 63655 Query 998 TATTAGTTAATCGGTTGTGCGTAGTATTGTCGAAGTAAATTCGGATCTAGATCATCTCAG 1057 |||||||| ||| | ||||||| || | || ||| || | | |||| Sbjct 63656 AATTAGTTA----GTTAGAATTTGTATTGTTAAAAAATTTTTAGATTTATAATACTTCAG 63711 Query 1058 AAATTGAGAGAAAGTAATAt-ttttttATNNTTTTCAGATAGTTACGGAGATGCAGAATA 1116 |||| || || || |||| | | | || |||| |||||||| | ||||||| | | Sbjct 63712 AAATCGATAGCAAATAATTTATGGATAATTTTTTTTAGATAGTTTCAAAGATGCAAATTT 63771 Query 1117 TTGGATTGCGATGAGAAATGATAATGGACCTTCAGT 1152 |||||| || | ||| |||||| || | ||||| || Sbjct 63772 TTGGATAGCTACGAGGAATGATTATAGGCCTTCCGT 63807 >seq600 Length=1111 Score = 122 bits (134), Expect = 8e-24 Identities = 85/93 (91%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 11736 GAGGAAAGTATATTTA--GTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 11793 ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 567 GAGAAAAGTATATTTATAGTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 508 Query 11794 GTTAT-ATCTGGCCAGATATAATAAAATCTTTT 11825 ||||| || | |||||||||||||||||| || Sbjct 507 GTTATTATATA-CCAGATATAATAAAATCTATT 476 Score = 104 bits (114), Expect = 2e-18 Identities = 57/57 (100%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 11128 TCCCGGGAAAAACGGATTAGATCTGGCCAGATCTTTAAATTGTCTCTATCTGACGAG 11184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 663 TCCCGGGAAAAACGGATTAGATCTGGCCAGATCTTTAAATTGTCTCTATCTGACGAG 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48751639380514