Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_006657.1
Length=19820
Score E
Sequences producing significant alignments: (Bits) Value
seq8078 257 2e-64
seq3261 248 1e-61
seq4013 185 1e-42
seq859 170 2e-38
SEQ20740 143 3e-30
seq4372 138 1e-28
seq2047 138 1e-28
seq5464 134 2e-27
seq272 109 7e-20
seq600 102 1e-17
seq1966 100 4e-17
seq6060 86.0 8e-13
SEQ34874 80.6 3e-11
>seq8078
Length=15557
Score = 257 bits (284), Expect = 2e-64
Identities = 200/246 (81%), Gaps = 5/246 (2%)
Strand=Plus/Minus
Query 10969 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATAAACAAAGTTTTTTATCAAAT 11028
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3935 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATTAACAAAGTTTTTTATCAAAT 3876
Query 11029 TTATTGCAAATTATTAATTATCAATATACACTGATGGGAAGatttattaactattaacaa 11088
|| |||| ||||||||||| | ||||| ||||| | ||||||||||||||||||||||
Sbjct 3875 TT---GCAACTTATTAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACAA 3819
Query 11089 attaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNNN 11148
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3818 ATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACAT 3759
Query 11149 NNNNNNNNNNNNNNNNTGAGAGGAAAGT--ATATTTAGTAAAATAGTTTATAAGTATTTA 11206
| ||| ||||| || | |||||||||||||||||||||||||
Sbjct 3758 TCAATAAATATTCATTTTGGAGAAAAGTTCATTTGTAGTAAAATAGTTTATAAGTATTTA 3699
Query 11207 TTAATA 11212
||||||
Sbjct 3698 TTAATA 3693
Score = 84.2 bits (92), Expect = 3e-12
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 10914 GCAGATCTGGCCAGATCTGTTTATATATGGCCAGATCTAATCTGTTTTTCCCGGGT 10969
||||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||
Sbjct 4202 GCAGATCTGACCAGATCGGTTTATGTATGGCCAGATCTAATCCGTTTTTCCCGGGT 4257
Score = 82.4 bits (90), Expect = 1e-11
Identities = 50/53 (94%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 10537 CCCGGGAAAAACGGATTAGATCTGGCCATATATAAACAGATCTGGCCAGATCT 10589
|||||||||||||||||||||||||||||| |||||| ||||||| |||||||
Sbjct 4256 CCCGGGAAAAACGGATTAGATCTGGCCATACATAAACCGATCTGGTCAGATCT 4204
>seq3261
Length=19281
Score = 248 bits (274), Expect = 1e-61
Identities = 212/266 (80%), Gaps = 10/266 (4%)
Strand=Plus/Plus
Query 10969 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAATAAACAAAGTTT-TTTATCAAA 11027
||||||||||||||||||||||||||||||||||||||| || |||| ||||||| |
Sbjct 242 TACAAGTAATGTGAATCGTGTCCATGATCGATGCGTAAT---TAATGTTTATTTATCACA 298
Query 11028 TTTATTGCAAATTATTAATTATCAATATACACTGATGGGAAGatttattaactattaaca 11087
|||| ||| ||| ||||||| | ||||| ||||| | |||||||||||||||||||||
Sbjct 299 TTTA---CAACTTAATAATTATTACTATACTCTGATAGAAAGATTTATTAACTATTAACA 355
Query 11088 aattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNNNNNNNNN 11147
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 356 AATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAAATATTTGTTAACA 415
Query 11148 NNNNNNNNNNNNNNNNNTGAGAGGAAAGTATATT--TAGTAAAATAGTTTATAAGTATTT 11205
| | |||| |||||| |||||||| |||||||||||||||
Sbjct 416 TTCAATAAATATTCATTT-TGTAGAAAATATATTTATAGTAAAACAGTTTATAAGTATTT 474
Query 11206 ATTAATAGTTAACAAATATAGTTATA 11231
||||||||||||||||||||||||||
Sbjct 475 ATTAATAGTTAACAAATATAGTTATA 500
Score = 87.8 bits (96), Expect = 2e-13
Identities = 92/121 (76%), Gaps = 9/121 (7%)
Strand=Plus/Plus
Query 10787 ATCGGCGCGCACGGGAACCGAACCTGGAACCTGACGCTTGAGAGACTAGTTCATTACCTG 10846
||||||| || | |||||||||||||| |||| || ||||| |||||| ||| ||||||
Sbjct 128 ATCGGCGTGCGCAGGAACCGAACCTGGGACCTAACACTTGAAAGACTAATTCCTTACCTC 187
Query 10847 TTTACCAACGAGACTTGGTTGAAACGAGAGTAGGTAGAGTTTGTAATAACTATAGTTAAT 10906
||||||||||| ||| |||| | | |||||| |||||||| | || ||||
Sbjct 188 TTTACCAACGAAGCTTCCATGAA--------AAGCAGAGTTAGTAATAAC-AGAGGTAAT 238
Query 10907 A 10907
|
Sbjct 239 A 239
>seq4013
Length=136960
Score = 185 bits (204), Expect = 1e-42
Identities = 149/179 (83%), Gaps = 2/179 (1%)
Strand=Plus/Minus
Query 15326 ATTAGTGGATTTTTAGTTTATTGCTAATTATAAATAAACTACATTGAATTAGACCATGAT 15385
|||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 24337 ATTAATACATTTTTAGTTTATTGCTAATTATAAATAAACTACATTGAATCAGACCATGAT 24278
Query 15386 CTTTGAAAGGACTTTATTTTAAATCATACTGAAGCGTATaaaaa--aaaTGGACTTGATC 15443
|| |||||||| |||| ||||||||| || |||||||||| |||| || ||| ||
Sbjct 24277 CTCAAAAAGGACTCAGTTTTGAATCATACTAAAACGTATAAAAAGTAAATAGATTTGTTC 24218
Query 15444 AGTTAAGTTTTTCGGCAGTTATCGTGACCACGCCGGTTTTCATACATACATTTAAAAGC 15502
|||| | |||||| ||| |||| |||| || ||| ||||| ||||| |||||| | |||
Sbjct 24217 AGTTGAATTTTTCAGCAATTATTGTGATCATGCCAGTTTTTATACACACATTTGACAGC 24159
Score = 116 bits (128), Expect = 5e-22
Identities = 105/133 (79%), Gaps = 12/133 (9%)
Strand=Plus/Minus
Query 15596 TTTATGTGTAAACACAGTTCTACAAGTGTGATAGAAAATAAATAGAGAAAATTTTAGTCC 15655
||||| ||||| | ||||||||||| |||||||||||| ||||||| |||||||||
Sbjct 23967 TTTATACGTAAATATTGTTCTACAAGTTTGATAGAAAATACATAGAGATAATTTTAGTTT 23908
Query 15656 AAGAAATCGCCTGATTTTTGTAAGGCGAGTGTAGAGCACAACCTCATCCGCTTCGCTTAT 15715
|||||||||| || |||| ||||| |||||||||| || ||||||||||
Sbjct 23907 AAGAAATCGCTCGA-TTTTCTAAGGTGAGTGTAGAG-----------CCTCTTCGCTTAT 23860
Query 15716 GAGGCGTGCAAAA 15728
|| ||||||||||
Sbjct 23859 GACGCGTGCAAAA 23847
>seq859
Length=62242
Score = 170 bits (188), Expect = 2e-38
Identities = 112/124 (90%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 1271 AAAAAGTTTGTAAAATCCAAAAGTGCACGCCTCATAATCTCATTTTTCATAATAAAGTTG 1330
|| ||||||| ||||||||||||||||||||||||||| | ||||| ||||||||| |||
Sbjct 5720 AATAAGTTTGAAAAATCCAAAAGTGCACGCCTCATAATTTAATTTTCCATAATAAAATTG 5779
Query 1331 ATTAAAATAAAATACAAATACTTTTAAATCTTTCGCGCCATTGTCCACCCAGAAAAGAAA 1390
||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||
Sbjct 5780 ATTAAAATAAAATACAAATACTTTTAAATATTTCGCCCCGTTGTCTTACCAGAAAAGAAA 5839
Query 1391 GGTA 1394
||||
Sbjct 5840 GGTA 5843
Score = 158 bits (174), Expect = 2e-34
Identities = 141/177 (80%), Gaps = 6/177 (3%)
Strand=Plus/Plus
Query 15556 AAAATGTCATAAGTGTTGAAAATAGAATTTTTCCATGACATTTATGTGTAAACACAGTTC 15615
|||||||| |||||||||||| ||| |||||| ||||||||||||| |||| | ||||
Sbjct 5944 AAAATGTCGTAAGTGTTGAAACTAGTGTTTTTCTATGACATTTATGTATAAATATTGTTC 6003
Query 15616 TACAAGTGTGATAGAAAATAAATAGAGAAAATTTTAGTCCAAGAAATCGCCTGATTTTTG 15675
|| || || ||||| |||||| |||||| |||||| || | || | |||||||||
Sbjct 6004 TAAAAATGCGATAGGAAATAAGTAGAGACAATTTTGGTTC------TCACTTGATTTTTG 6057
Query 15676 TAAGGCGAGTGTAGAGCACAACCTCATCCGCTTCGCTTATGAGGCGTGCAAAAGACT 15732
|||||||| |||| || | | |||| | ||| ||||||||||||||||||| |||
Sbjct 6058 TAAGGCGAAAGTAGGGCGCTATTTCATTCACTTTGCTTATGAGGCGTGCAAAATACT 6114
>SEQ20740
Length=2826
Score = 143 bits (158), Expect = 3e-30
Identities = 124/163 (76%), Gaps = 5/163 (3%)
Strand=Plus/Minus
Query 11081 attaacaaattaatttattcgaaaacaattatttaatttattaaattctaataaatNNNN 11140
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2325 ATTAACAAATTAATTTATTCGAAGACAATTATTTAATTTATTAAATTCTAATAGATATTT 2266
Query 11141 NNNNNNNNNNNNNNNNNNNNNNNNTGAGAGGAAAGTATATT-----TAGTAAAATAGTTT 11195
| ||| |||||||||| ||||||||||||||
Sbjct 2265 GTTAACATTCAATAAATATTCATTTTGGAGAAAAGTATATTATTATTAGTAAAATAGTTT 2206
Query 11196 ATAAGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCC 11238
||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2205 ATAGGTATTTATTAATAGTTAACAAATATAGTTATATCTGGCC 2163
>seq4372
Length=314715
Score = 138 bits (152), Expect = 1e-28
Identities = 96/109 (88%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 14846 ATTTTCTGACTCAGCTCGTCGAGTTAAGTCGGAATATAGCAAAATTTTTCAAAAGTTTCG 14905
||||||||| || ||| | |||| | ||||| ||||||||||||||||||||||||| |
Sbjct 5937 ATTTTCTGAATCCGCTTGACGAGCTGAGTCGAAATATAGCAAAATTTTTCAAAAGTTCTG 5996
Query 14906 TCATGAGGACCATTGCAATAGTTAGATTTCTATGAAATCTACTAAAAAA 14954
| |||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct 5997 TTATGAGGACCAATGCAATAGTTAGATTTCTATGAAATCTACAAATAAA 6045
>seq2047
Length=897053
Score = 138 bits (152), Expect = 1e-28
Identities = 96/109 (88%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 14846 ATTTTCTGACTCAGCTCGTCGAGTTAAGTCGGAATATAGCAAAATTTTTCAAAAGTTTCG 14905
||||||||| || ||| | | || | | ||| ||||||||||||||||||||||||| ||
Sbjct 418648 ATTTTCTGAATCCGCTTGACAAGCTGAATCGAAATATAGCAAAATTTTTCAAAAGTTCCG 418589
Query 14906 TCATGAGGACCATTGCAATAGTTAGATTTCTATGAAATCTACTAAAAAA 14954
|||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct 418588 TCATGAGGACCAATGCAATAGTTAGATTTCTATGAAATCTACAAATAAA 418540
>seq5464
Length=105685
Score = 134 bits (148), Expect = 2e-27
Identities = 96/109 (88%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 14846 ATTTTCTGACTCAGCTCGTCGAGTTAAGTCGGAATATAGCAAAATTTTTCAAAAGTTTCG 14905
||||||||| || ||| | |||| | ||||| |||| ||||||||||| |||||||| ||
Sbjct 29727 ATTTTCTGAATCCGCTTGACGAGCTGAGTCGAAATAGAGCAAAATTTT-CAAAAGTTCCG 29785
Query 14906 TCATGAGGACCATTGCAATAGTTAGATTTCTATGAAATCTACTAAAAAA 14954
|||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct 29786 TCATGAGGACCAATGCAATAGTTAGATTTCTATGAAATCTACAAATAAA 29834
>seq272
Length=85250
Score = 109 bits (120), Expect = 7e-20
Identities = 83/97 (86%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 1787 CTTTTTGGTTTGAAAAAATCTTAACAAACGCGGCAAGG-TCAAATCTCAACCAAGCTGGT 1845
|||||||| ||| ||||| ||||| |||||| |||| || ||||||||| ||||||||
Sbjct 82303 CTTTTTGGGTTGTGAAAATTTTAACCTACGCGGTAAGGGTCGAATCTCAACTAAGCTGGT 82244
Query 1846 TTCTAAGACCAGCTTGGGATTCGAACTCGCACCTGGC 1882
||| |||||||||||| ||||||||| | ||||||||
Sbjct 82243 TTCCAAGACCAGCTTGAGATTCGAACCCACACCTGGC 82207
Score = 95.1 bits (104), Expect = 2e-15
Identities = 80/97 (82%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 1787 CTTTTTGGTTTGAAAAAATCTTAACAAACGCGGCAAGG-TCAAATCTCAACCAAGCTGGT 1845
|||||||| ||| ||||| ||||| ||| || |||| || ||||||||| ||||||||
Sbjct 79000 CTTTTTGGGTTGTGAAAATTTTAACCTACGTGGTAAGGGTCGAATCTCAACTAAGCTGGT 78941
Query 1846 TTCTAAGACCAGCTTGGGATTCGAACTCGCACCTGGC 1882
||| |||||||||||| |||| |||| | | ||||||
Sbjct 78940 TTCCAAGACCAGCTTGAGATTTGAACCCACGCCTGGC 78904
>seq600
Length=1111
Score = 102 bits (112), Expect = 1e-17
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand=Plus/Minus
Query 11168 GAGGAAAGTATATTTA--GTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 11225
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 GAGAAAAGTATATTTATAGTAAAATAGTTTATAAGTATTTATTAATAGTTAACAAATATA 508
Query 11226 GTTAT 11230
|||||
Sbjct 507 GTTAT 503
>seq1966
Length=14178
Score = 100 bits (110), Expect = 4e-17
Identities = 81/97 (84%), Gaps = 1/97 (1%)
Strand=Plus/Plus
Query 1787 CTTTTTGGTTTGAAAAAATCTTAACAAACGCGGCAAGG-TCAAATCTCAACCAAGCTGGT 1845
|||||||| ||| ||||| ||||| |||||| |||| || ||||||||| ||||||||
Sbjct 4223 CTTTTTGGGTTGTGAAAATTTTAACCTACGCGGTAAGGGTCGAATCTCAACTAAGCTGGT 4282
Query 1846 TTCTAAGACCAGCTTGGGATTCGAACTCGCACCTGGC 1882
||| ||||||| |||| ||||||||| | | ||||||
Sbjct 4283 TTCCAAGACCATCTTGAGATTCGAACCCACGCCTGGC 4319
>seq6060
Length=27493
Score = 86.0 bits (94), Expect = 8e-13
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 19591 AAAAAACCAAAATTCTTCACATCATAATTCTTGGAATTCAATAGTACCTACTCACATTTA 19650
|| |||| ||||| | || || |||||| |||||||||||| ||||||||||||| |
Sbjct 25707 AAGAAACATAAATTTTCCATATTATAATTTTTGGAATTCAATTGTACCTACTCACAACAA 25766
Query 19651 ATTAGAACACGTATAACCCGAACATACTTTATCGGTTACCATGAACTTTGTCGCCAACCG 19710
|| || || ||| | | | |||||||| |||||||||||||||||| ||||
Sbjct 25767 ATAAGTACTCGTGTTTCTTAGCCGTACTTTATTAGTTACCATGAACTTTGTCCTTTACCG 25826
Query 19711 GACGT 19715
|| ||
Sbjct 25827 GATGT 25831
>SEQ34874
Length=1816
Score = 80.6 bits (88), Expect = 3e-11
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 11010 ACAAAGTTTTTTATCAAATTTATTGCAAATTATTAATTATCAATATACACTGATGGGAAG 11069
|||| ||||||||||||||| |||| ||||||||||| | ||||| ||||| | |||
Sbjct 1527 ACAACGTTTTTTATCAAATTC---GCAACTTATTAATTATTACTATACTCTGATAGAAAG 1583
Query 11070 atttattaactatta 11084
|||||||||||| ||
Sbjct 1584 ATTTATTAACTACTA 1598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 63276058382411
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