Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value SEQ11236 801 0.0 seq1261 471 8e-129 SEQ11191 84.2 4e-12 seq5129 82.4 1e-11 >SEQ11236 Length=22949 Score = 801 bits (888), Expect = 0.0 Identities = 486/514 (95%), Gaps = 0/514 (0%) Strand=Plus/Minus Query 24756 ACTGCCAAGAACTCAGCTTTTGATGAGCAAGCTGGAACTCTGGCAAGTGAGGATACAAAA 24815 || ||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||| Sbjct 1916 ACCGCCAAGAACTCAGTCTTTGATAAGCAAGCTGGAATTCTAGCAAGTGAGGATACAAAA 1857 Query 24816 GACTGTTTCATCCCTCCAAGGACGCCAACAATCAGGACGACAAGCTTGACACGGTAACCT 24875 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | Sbjct 1856 GACTGTTTCATCCCTCCAAGGACGCCAACAATCAGGACGACAAACTTGACATGGTAAACC 1797 Query 24876 GGGTAAAGTTTGCCAATTTCAAACAGGAGATCCTGATATATTTGTCTTTTGTGCTCTTCT 24935 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1796 GGGTAAAGTTTGCCAATTTCAAACAGGAGATCCTGATATATTTGTCCATTGTGCTCTTCT 1737 Query 24936 TTGGCTGAGATGTTGTATTCAGCCGGGGCCGAAAACTCTATGACATAAATGTCACGAGTA 24995 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 1736 TTGGCTGAGATGTTGTATTCAGCCGGGGCCGAAAACTCAGTGACATAAATGTCGCGAGTG 1677 Query 24996 GCCTTGTCGAAGAGCACAATATCAGGTTTGTTGTGATCTATCCGCCGGGTTGTTGCAAAT 25055 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1676 ACCTTGTCGAAGAGCACAATATCAGGTTTGTTGTGATCTATCCACCGGGTTGTTGCAAAT 1617 Query 25056 GGCATGTTCCAATAGATTTTGCAACTGTCATTCTCAACAACCCGGGGAATATCTCCTGGC 25115 |||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 1616 GGCATGTTCCAATAAATTTTGCAACTGTCATTCTCAACAACCTGGGGAATGTCTCCTGGC 1557 Query 25116 AGATAAGGCAGCACTGGTGTCACGTCAATACCGTAGCAATGACGAAGATAATAGTACAGT 25175 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 1556 AGATAAGGCAGCACTGGTGCCACGTCAATACCGTAGCAATGACGAAGATAGTAGTACAGT 1497 Query 25176 ACTCTCAGGGCTGCATTATGACGCTGGATATATGCACCTCTCGCCAGCACAGGGCATGCT 25235 ||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct 1496 ACTCTCAGGGCAGCATTGTGACGCTGGATATATGTACCTCTCGCCAGCACAGGACATGCT 1437 Query 25236 GACAAAAGGTGCATAAGCGTCTCCGGATGTTGTT 25269 ||||||||||||||||| |||||||||||||||| Sbjct 1436 GACAAAAGGTGCATAAGTGTCTCCGGATGTTGTT 1403 Score = 226 bits (250), Expect = 6e-55 Identities = 128/130 (98%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 24586 AATGCTCAGGGGGGTTGTCCCCGGAGTCCGACTCTCCGAGGGCCCAGCCTGAGCTCCATC 24645 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13333 AATGCTTAGGGGGGTTGTCCCCGGAGTCCGACTCTCCGAGGGCCCAGCCTGAGCTCCATC 13274 Query 24646 CATTACTGCTGGACCACTCCGCACAACAAGGCGGTTAGTGATCACAGCAGGCCAAAGTCA 24705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13273 CATTACTGCTGGACCACTCCGCACAACAAGGCGGTTAGTGATCACAGCAGGCCAAAGTCA 13214 Query 24706 TTTTCCTAAG 24715 ||| |||||| Sbjct 13213 TTTCCCTAAG 13204 >seq1261 Length=157084 Score = 471 bits (522), Expect = 8e-129 Identities = 477/633 (75%), Gaps = 77/633 (12%) Strand=Plus/Minus Query 13368 AGTAGTAAATTTGATTTCCGTTCGGTCCACCTGGCTCTACCCACGTAGTCGATCGCACCC 13427 ||||||||| ||||||||| ||||| |||||||||| | ||||||||||||||||| ||| Sbjct 100912 AGTAGTAAACTTGATTTCCATTCGGACCACCTGGCTTTGCCCACGTAGTCGATCGCTCCC 100853 Query 13428 TGAATGGCTTACTGAGGTCGTCTGGTAAATATACTCGTTCCGTTTGCTTTACTATTGATC 13487 ||||| ||||| ||||||| |||||||||||||||||||| Sbjct 100852 TGAATAGCTTATTGAGGTCTTCTGGTAAATATACTCGTTC-------------------- 100813 Query 13488 CATAGATGGCGTTGTTGTTTGGACGAGTGTTATAAACATAAtttttttGTATAGTTATGG 13547 | |||||||| ||||| ||||||||||||| | |||||||||||||| || Sbjct 100812 -------GTCGTTGTTGCTTGGATAGGTGTTATAAACATTAGTTTTTTGTATAGTTGGGG 100760 Query 13548 TATCCGGCATCGCCGGGTTGGCGTTCAAGATGTCCTGCAGGTCATCATTGTCAAATAATC 13607 || ||||||| || ||||||||| |||| ||| ||||||||||| | |||||||||| Sbjct 100759 CCTCTGGCATCGACGCGTTGGCGTTGGAGATATCCCGCAGGTCATCACTATCAAATAATC 100700 Query 13608 CAACAATCTCTCTGTATCTATCCTGCTATGCCTCAATACCTTaaaaaaaaaaCTATGAGC 13667 || |||| || |||| | ||||| || |||||| ||||||| |||||||||||||| Sbjct 100699 CATCAATATCACTGTCTATATCCCGCCATGCCTGAATACCT----AAAAAAACTATGAGT 100644 Query 13668 AGTCCTGCGTAATNNNNNNNNNNNNNNNNNNACATTGAAGAAAATAAAATAGAAAATTAT 13727 | ||||||||| |||| |||||||| |||||||||||||| Sbjct 100643 GATTCTGCGTAATATAAAACAT----------CATTAAAGAAAATGAAATAGAAAATTAT 100594 Query 13728 TTTACTTACAAGAGGTCCCGATAAGAGCGAAGAGTATTACTGC-----AG---------- 13772 ||||||||||||||||||||||||||||||||||||||| | | || Sbjct 100593 TTTACTTACAAGAGGTCCCGATAAGAGCGAAGAGTATTATTACTTATGAGTTACTTATTA 100534 Query 13773 ------TAGCTTTGCTAAATGACATGATCGCACCGATGTTCGATGAACACTGAAGCCCTC 13826 ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||| Sbjct 100533 CTTACTTAGCTTTGCTACGTGACATGATCGCACAGATGTTCTATGAACACTGAAGTCCTC 100474 Query 13827 GATCTTAATCGTCCGTTTTATACTATTGATTAT---CTGACACACGACGTTTACGTCAGA 13883 ||| | |||||||||||| |||||| ||||||| | |||||||||||| |||||||| Sbjct 100473 GATGTCAATCGTCCGTTTCATACTACTGATTATATACCTACACACGACGTTAACGTCAGA 100414 Query 13884 ACTTAAAACTCG-TCACGTGTTCTCGAAACTGTCGTCAAGTCAATTAAAATTTTTATTAG 13942 |||||| |||| || ||| | ||| ||| || | ||||||||||||| Sbjct 100413 TCTTAAAGCTCGTTCTCGTTT-----AAA-----ATCATGT-TCTCGAAATTTTTATTAG 100365 Query 13943 GTTGTTTGTGTGATCTTCAACCTTTGTCGTGTC 13975 |||||||||||||||| ||||| ||||||||| Sbjct 100364 TTTGTTTGTGTGATCTTTAACCTCTGTCGTGTC 100332 Score = 428 bits (474), Expect = 9e-116 Identities = 370/454 (81%), Gaps = 33/454 (7%) Strand=Plus/Minus Query 11061 ATAAGCTCTTTAGTTAAGTCAAAAACTGATTTTTATTCTAGTACTCAACATCTCAGACTT 11120 ||| ||||||||| | || |||||||||||||||||| || |||||||| ||||||| Sbjct 103307 ATACGCTCTTTAGGTGAGCCAAAAACTGATTTTTATTAAAGCACTCAACACCTCAGACAA 103248 Query 11121 AACTATTCTTCCGTGAAGTTGGTG----TA-TCCAAAGAATTTACTCTGATTTTTAGCGA 11175 || |||||||||||||||| || || || || ||| |||||||||||||||||| Sbjct 103247 AAGTATTCTTCCGTGAAGTGAATGATTTTACTCGAACAAATATACTCTGATTTTTAGCGA 103188 Query 11176 ATA-TCTATTATGCGCATGGACAAAAGTCGAGTCCATAGCCGAAGGATACTTTCATTTTG 11234 ||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct 103187 ATAATCTATTATGCGCATGGACAAAAATCGAGTCCATACCCGAAAGATACTTTCATTTTG 103128 Query 11235 ACTTTGTGT-AAGTACTCCAAAAAATTCGGGGGCAAAGACGGTGTTTCGCAGATGTCCTC 11293 ||| || ||||| || ||||||| |||| ||||||| |||||||||| |||||||| Sbjct 103127 ACTCAATGACAAGTAATCTGAAAAATTAGGGGACAAAGACAGTGTTTCGCAAATGTCCTC 103068 Query 11294 CTATTAGCGAGCATCCAG-----ATTCAGTTGTTCTTGGTGACTACGCTCTTCTGATATT 11348 ||||||||||| |||||| |||| |||| |||| |||||| ||||||||||||||| Sbjct 103067 CTATTAGCGAGTATCCAGTTCAGATTCGGTTGATCTTAGTGACTGCGCTCTTCTGATATT 103008 Query 11349 ACGCAGGTTACCCGCAGCTCTCTGGGCTACTCAGCAAAACCAC---GATACGAGTTCATG 11405 || ||||||| ||| |||||||||||||||||||||||||||| | |||||||| || Sbjct 103007 ACTCAGGTTATCCGTAGCTCTCTGGGCTACTCAGCAAAACCACATAGGTACGAGTTTATA 102948 Query 11406 TACTGGATTATATNNNNNNATTGGTTTTCACCATTGTAATCAAT-----------CATAC 11454 |||||||| ||| ||||| ||||||| || |||||||| ||||| Sbjct 102947 TACTGGATCATA----CATATTGG-TTTCACCTTTATAATCAATACATACATTCACATAC 102893 Query 11455 ATTTATACACATATGTTTAT--TAGACTGTGTGA 11486 ||||||||||| |||||||| |||||| ||||| Sbjct 102892 ATTTATACACAGATGTTTATTATAGACTATGTGA 102859 Score = 389 bits (430), Expect = 8e-104 Identities = 285/325 (88%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 10567 GGCATTTCACACCCCCCTCTCTTCTTACCTAAAGAAGCCACTGAGTTCAACTAGAATGGT 10626 ||| ||| ||||||||| ||||||| ||||||||||||| | || |||||||||||||| Sbjct 103689 GGCGTTTTGCACCCCCCTTTCTTCTTGCCTAAAGAAGCCAATAAGGTCAACTAGAATGGT 103630 Query 10627 CACGCAACGTGACCAGTTGTTAATCGCTATGCAGACCAATATTTCTCAGTAAAAACTGGT 10686 | ||| ||||||||||| ||||||||||||||| |||| || | || || | ||| Sbjct 103629 C--GCAGCGTGACCAGTTCC-AATCGCTATGCAGACTTGTATTCCTGATTATAACC-GGT 103574 Query 10687 TTTGTGTGTAATGTTCGAATTCTCGAGAATTGACACGTGACCATATCTACTTTCCAAGAG 10746 |||||||||||| || |||||||| |||||||||||||||||||| |||||||||| ||| Sbjct 103573 TTTGTGTGTAATTTTTGAATTCTCTAGAATTGACACGTGACCATACCTACTTTCCATGAG 103514 Query 10747 GTCGTTGCTGACTTTAGTGGCAGTAGGTACCTAATCAGGTTTACAAGTCCAAACCTATAT 10806 |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 103513 GTCGTTGCCAGCTTTAGTGGCAGTAGGTACCT-ATCAGGTTTACAAGTCCAAATCTATAT 103455 Query 10807 GGGCCTCATCTACTACTGTTTCAGCTTAGCAACTGATCTCCAAGTCAAAATCAAATTTTT 10866 |||||| ||||||||||||||||||||||||||||||| |||| || |||||||| |||| Sbjct 103454 GGGCCTTATCTACTACTGTTTCAGCTTAGCAACTGATCACCAAATCGAAATCAAA-TTTT 103396 Query 10867 AGCTTTATTTGGTCATATTCTATAC 10891 ||||| |||||||||| |||||||| Sbjct 103395 AGCTTCATTTGGTCATGTTCTATAC 103371 Score = 208 bits (230), Expect = 1e-49 Identities = 213/280 (76%), Gaps = 12/280 (4%) Strand=Plus/Minus Query 11597 GTTAAAGGTTGTTTCTCGTCCATTAGAATGTTATTGTATCATGATTTACTACGTGTCATA 11656 ||||||| ||||||||||||||||||||| ||||||||| |||| |||||| | Sbjct 102613 GTTAAAG-TTGTTTCTCGTCCATTAGAATATTATTGTATTGTGAT------CGTGTC-TG 102562 Query 11657 ATTTTTGGAACTTCAAAACAGCAATTTGGTGGGAGAAGAAGAATTACTCTAAATACTTCG 11716 |||| ||||| |||||| |||||| |||| ||| ||||||||| ||||||||| | Sbjct 102561 ATTTCAAGAACTATAAAACAACAATTTAGTGGCGGAAATAGAATTACTATAAATACTTTG 102502 Query 11717 ATTTTAAAAGTGATTCTACCATAAGCAAGGAAGACATCATCGTTCTATAACTACTAAGTA 11776 ||||||||||| |||||| | || ||||||||||||| ||| |||| |||| ||||||| Sbjct 102501 ATTTTAAAAGTAATTCTATCTTATCCAAGGAAGACATCTTCGATCTAGAACTGCTAAGTA 102442 Query 11777 AGTAG---CAATTTATTCAGTTG-ATTTTTTAANNNNNNNNNNNNNNNNNNNGATTTGAA 11832 ||||| || |||| ||||| |||||| || |||||||| Sbjct 102441 AGTAGTACTAAATTATCTAGTTGAATTTTTAAATTTTTGATTTATTAATTGTGATTTGAA 102382 Query 11833 TTTAACAAATGATAAATAATTATCTCAATGGATTAATATT 11872 ||||| |||||| ||||||| |||||| ||||||| |||| Sbjct 102381 TTTAATAAATGACAAATAATCATCTCACTGGATTATTATT 102342 Score = 158 bits (174), Expect = 2e-34 Identities = 124/147 (84%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 8496 TTCCTGAAACTAGTCAATAAAAGAGAGAAAAATACGCATAACTTAAAGTTATCTGAA-GG 8554 ||||||||||||||| ||| |||||| ||||| ||| |||||||||||||| || || Sbjct 103871 TTCCTGAAACTAGTCGATAGAAGAGAAGAAAATCAGCAGTACTTAAAGTTATCTTAAAGG 103812 Query 8555 TCTCCTTGTGGTTTAGGTCGTAAAAATTTAATAGTCAGGCTAATTAAGATACTTGCCGCT 8614 || |||| | ||||||||| | ||||||||| ||| |||||||||||||||||||||||| Sbjct 103811 TCCCCTTCTAGTTTAGGTCATCAAAATTTAAAAGTGAGGCTAATTAAGATACTTGCCGCT 103752 Query 8615 ATCCATAAATACATAAATGGCTTATCA 8641 |||||| ||||| ||| | |||||| Sbjct 103751 ATCCATGAATACGTAATTTATTTATCA 103725 >SEQ11191 Length=298245 Score = 84.2 bits (92), Expect = 4e-12 Identities = 210/312 (67%), Gaps = 13/312 (4%) Strand=Plus/Minus Query 16153 CTTTTTAA-AGGCTGGGAACCAATTTTGACTGGGCCATAAAGGAACTATCAGGATTCCTT 16211 ||||| || ||| || |||||| |||| |||||||| ||||| | || |||||| Sbjct 215999 CTTTTGAACAGG--GGAAACCAAGGTTGATTGGGCCATTGTGGAACAACCAATATTCCTC 215942 Query 16212 CCGCTTTATCTAGCTTTATTTTTTGAATTACTTTGGCAATTACTGCGAACGGTGGAAAAG 16271 || || || |||||||| || |||||| ||| | | ||||||||||||| Sbjct 215941 TGGCCTTGTCATTGATTATTTTTCTAAGTACTTTCAGAATGATAGAGAACGGTGGAAAAC 215882 Query 16272 CATAGAAAAA---CCACGGCCTCCAGCTAATCGTGAACGCGTCTATCGCGAAAGCTTTCG 16328 ||||||||| | || || | | ||| || || ||||||| | |||| | | Sbjct 215881 AATAGAAAAATAGTCCCGACCACGA---AATTGTAAATGCGTCTACACAGTAAGCATCTG 215825 Query 16329 GATCCCTGTCCCATGCACAGTAATTGATGCATTTGTTATTGAACTCTGAC--GCGAAGAG 16386 | ||||||| ||| | || || |||||||| ||| | ||| || || ||||| Sbjct 215824 GGTCCCTGTGCCAAGATATATATTTTTGGCATTTGTAATT-TAGTCT-ACTTGCAAAGAG 215767 Query 16387 GTCTATTTCTGGGATACCAAATATTTTAATTATCTTTTTGTATGCATAATCAGCTAGTTG 16446 ||| ||||| || | || || | |||| || |||| ||||| || || ||| | Sbjct 215766 GTCAATTTCCGGTTTCCCTAACTTATTAACGATTCTTTTAAATGCAGTATGAGATAGCTC 215707 Query 16447 CCATTCTGTATC 16458 |||||| |||| Sbjct 215706 CCATTCAATATC 215695 >seq5129 Length=73874 Score = 82.4 bits (90), Expect = 1e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 ||||| |||||| | || ||| ||| ||| || |||||||| ||| | | | ||| Sbjct 1078 ACATGTTCATCAAATATGTGCCTCAAATTTATATCATCTTGCTTGAATATTATTAAAAAA 1019 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||| |||| || | | | ||||| |||| | || || |||||| | ||||| || Sbjct 1018 TTTACATTGTCACGCACTAACTGCTTTGGTACTTTTGAGTATGTTTGAGATAGATAAAAA 959 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTG-ATGTGATCCTGTTTTTC 7463 | || | || | |||||| |||||| | |||| || || | |||| | |||||||| Sbjct 958 CAATCTATATTCCTGTGTCTACCCAT-CGTAAAATAGTTTCGTATGTTAATTTGTTTTTC 900 Query 7464 ACAAGCAACATCGTCAAATATCAT 7487 |||| | || || ||||| || || Sbjct 899 ACAAACTACGTCATCAAAAATAAT 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97927444482886