Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq409 98.7 1e-15
>seq409
Length=488447
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829
||||||||||| || | |||||| || ||||| || || || || || |||| |||||
Sbjct 76234 TACATTTCAGAGTGAACATTTTCCATAGCTATTTGGAACCCATAGAAGAATCTGGCCTCA 76293
Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889
| | ||||||||| |||| || | | | |||||||| || |||||||||
Sbjct 76294 GTAACTTGAACCTCTTGTGAAAACCGCTCCACTAGATTTTCATTGACAATTCCATCAGAT 76353
Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTC 21949
|||||||||||||| | | | |||||| |||| || || ||| |||| ||| |
Sbjct 76354 GCGGCAAAAAATGCTAGAACGTGTTTTATGAAATGTCTCTCACAATCCTTTAAACTTTCC 76413
Query 21950 CAATCTAATAAATC 21963
||||| ||||||
Sbjct 76414 CAATCCGGTAAATC 76427
Score = 91.5 bits (100), Expect = 2e-13
Identities = 117/156 (75%), Gaps = 4/156 (3%)
Strand=Plus/Plus
Query 21112 TATAAAA-ATATTT-ATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCttttttt 21169
||||||| || || |||||||| |||||||| |||| || |||||||| || |
Sbjct 74145 TATAAAACATGTTGGATTTAAAACTCAGCATCCAATGTAAACACATTATCCTCAGGATCA 74204
Query 21170 GACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCT 21229
| ||| | |||| ||| || || |||| ||| | || || ||||| || |||||||||
Sbjct 74205 GCCATTACTCCCCATTTCTGGTATTCACCTACTTTCTTCTCAAAAAAGTTGGTCTTTCCT 74264
Query 21230 TCCAATGATAT-AGATTCCATAAAATCAAATGGATT 21264
|| || || || || || |||||| |||||||||||
Sbjct 74265 TCTAAAGAGATGAGGTT-CATAAAGTCAAATGGATT 74299
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/225 (70%), Gaps = 5/225 (2%)
Strand=Plus/Plus
Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559
||||| || ||| | |||||| || || || || ||||| | ||| | ||| |||
Sbjct 75179 TCATCTCTTGATATAAGCTCATTACTGAAAGTCAAGCCAGGCATGAGTCCACGCTTCTTT 75238
Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619
|||||||| || || ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 75239 AACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAATGCT 75298
Query 21620 ACTAAT-CGTTCACCGTATGTAG-ATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677
| |||| ||||| || | || | | | || | | ||||||| | |||||| | |
Sbjct 75299 A-TAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCA-ATCCATTGTAGTGCCCAGTCCG 75356
Query 21678 CCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGA 21721
|||| | ||||| |||| | || || ||||| || || ||||
Sbjct 75357 CCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAAGA 75401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531632462695160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |