Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_007035.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq328 89.7 4e-14 SEQ10065 84.2 2e-12 SEQ30387 78.8 7e-11 >seq328 Length=160579 Score = 89.7 bits (98), Expect = 4e-14 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 3431 ttttctattttcctttttCTTGCACATCATTACAATTATTCGAGTATGATGCATCCACAC 3490 ||||| |||||| ||||| | | || ||| |||||||| | || | |||||||| Sbjct 159547 TTTTCCATTTTCTTTTTTTTGGGTCAGCATCACAATTATCTGTACTTGCTCCATCCACAG 159606 Query 3491 TGTTCTCCAGAAGTCGTAGGCTGTCTGCTGCAA--CGGTGCCTGAGTACAAATAAACttt 3548 |||| | || | |||| || | ||| | ||| || | || ||||| ||||| Sbjct 159607 CATTCTGTAAAAATTGTAGCACGTTT--TGCGAGTCGGAGCTTCAGCGCAAATGAACTTC 159664 Query 3549 tttttGTATTCATAGCCGTCTACATAATTCGCATTTATATAGTCTCCTCTAtttttttCA 3608 ||| ||| ||| ||||||| ||||| || | |||||| || || ||| ||| ||| Sbjct 159665 TTTGTGTGCTCAAAGCCGTCAACATAGTTTGAATTTATGTAATCCCCTTCGTTTCGTTCC 159724 Query 3609 GCAGGCAACGTCACTCTAGTGTGATCAAAACA 3640 ||||| ||||||| | |||||||||||| Sbjct 159725 TTCGGCAAAATCACTCTCGAGTGATCAAAACA 159756 >SEQ10065 Length=2787 Score = 84.2 bits (92), Expect = 2e-12 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 3431 ttttctattttcctttttCTTGCACATCATTACAATTATTCGAGTATGATGCATCCACAC 3490 ||||| |||||| ||||| | | || ||| |||||||| | || | |||| || Sbjct 2393 TTTTCCATTTTCTTTTTTTTGGGTCAGCATCACAATTATCTGTACTTGCTCTATCCGCAG 2334 Query 3491 TGTTCTCCAGAAGTCGTAGGCTGTCTGCTGCAA--CGGTGCCTGAGTACAAATAAACttt 3548 |||| | || | |||| || | ||| | ||| || | ||| ||||| ||||| Sbjct 2333 CATTCTGTAAAAATTGTAGCACGTTT--TGCGAGTCGGAGCTTCAGTGCAAATGAACTTC 2276 Query 3549 tttttGTATTCATAGCCGTCTACATAATTCGCATTTATATAGTCTCCTCTAtttttttCA 3608 ||| ||| ||| ||||||| ||||| || |||||||| || | ||| ||| ||| Sbjct 2275 TTTGTGTGCTCAAAGCCGTCAACATAGTTTGCATTTATGTACTTCCCTTCGTTTCGTTCC 2216 Query 3609 GCAGGCAACGTCACTCTAGTGTGATCAAAACA 3640 ||||| ||||||| | |||||||||||| Sbjct 2215 TTCGGCAAAATCACTCTCGAGTGATCAAAACA 2184 >SEQ30387 Length=3500 Score = 78.8 bits (86), Expect = 7e-11 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 6641 CAATAGACATGATGAATATTGTTTTACAACTTGGAGCTGACATAAACGGACAAGAAGGAC 6700 ||| ||| |||||||| || || || || ||||| |||||||||||||| || ||| | | Sbjct 1342 CAAAAGAAATGATGAACATCGTCTTGCAGCTTGGGGCTGACATAAACGGCCAGGAATGGC 1283 Query 6701 TCGCAGGCCTCACGCCACTTCACATATGTGTAAATaaaaaaaaTTACGCTCTCGCTGAAT 6760 | | || ||| || || ||| | ||||| ||| || |||| |||||||||| Sbjct 1282 TTGGTGGTTCCACTCCTCTGCACTTGTGTGTTTGGGAAAGGAACTACGAGCTCGCTGAAT 1223 Query 6761 GGCTTTGTCAGGCGCCGGGTATCGAT 6786 |||| || ||| || || ||| || Sbjct 1222 GGCTGTGCAGGGCACCAGGCATCAAT 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35830124345352