Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_007039.1
Length=17355
Score E
Sequences producing significant alignments: (Bits) Value
SEQ10566 111 2e-20
seq2777 95.1 1e-15
seq8489 93.3 5e-15
>SEQ10566
Length=10276
Score = 111 bits (122), Expect = 2e-20
Identities = 403/620 (65%), Gaps = 17/620 (3%)
Strand=Plus/Minus
Query 5739 GTTTTCACCACT-GGTTCAAGCAGATGTCCGCAGCACAGAAGGTCCCAGTTCTTCCTATA 5797
|||||||| | | |||||||||||||||| || |||||||| |||||||| || |
Sbjct 1846 GTTTTCACGAGTTGGTTCAAGCAGATGTCTAGTGCGCAGAAGGTTCCAGTTCTGCCGACG 1787
Query 5798 CCAGAGTTACAGTGCACGATCATAGGGCTAGAAGACTCTTTGAAATCTTCCGAGGATAT- 5856
||| ||| ||||| || | || |||| | || | | |||| | | ||
Sbjct 1786 CCATCGTTGCAGTGGACCACCACCGGGCAAAGCAACGCATC-----CTTCGGTTCAAATA 1732
Query 5857 -CTTCATGTACCGCTTTTCGTACTCTGTTCGTCATTTTTATGA--AATCAATGAACCACG 5913
|| |||||| || |||||||| || | | ||| | || | |||||||
Sbjct 1731 GCTCCATGTAGA-CTCGACGTACTCTATTAACCTCTCTTACTCTTACTCGACTAACCACG 1673
Query 5914 CTAAATCGGATGGCATACTATGTTCTGGCCAATGAAGGCACTGGAAGTGAGTTATTTTTC 5973
|| ||||| || | | ||| ||||| | |||||||||| ||| || |
Sbjct 1672 GCAAGTCGGAAGGAGTCTCGTATTCAAACCAATTGCTGTGCTGGAAGTGACTTAGCTTCC 1613
Query 5974 GTGATCGCTGGGTAGTTTTATCAGTAATTTCTAGAAATGTCCGGATATAGTTTGGTCTAA 6033
||| || | ||||| | ||||| | | |||||||| || | | |||
Sbjct 1612 TAGATGTCTTCAAGGATTTATTCATGATTTCGATCAGTGTCCGGACGTACTCAGTCCTAG 1553
Query 6034 CTGTGACTCTCAAAGTTTTTATGGTGTATTCTTCCGTAACCAACAAATTGTCTTCATAAG 6093
| |||||| || |||||| ||| | |||| || | | || || | | ||| |
Sbjct 1552 CCGTGACTTTCCGAGTTTTGATGCGGAATTCGTCTATGTCTAATAACGTATTTTCTCTGG 1493
Query 6094 GACACCAATACTGATGACATTTTTCGTTACCACCTTCTTTGATCTTCGTTAACATCACTA 6153
||||||||||||| | | ||||| ||| | |||| | |||||||||||||
Sbjct 1492 TGCACCAATACTGATAATACTTTTCTCCACCGACAACTTTAGTTGGAGTTAACATCACTA 1433
Query 6154 TGACATGGCTATGTTGTTGCCATACAACCTTCCAAAAGTCAGCTACGGTATTTTTCATAG 6213
| |||| | ||| || ||||| | | | |||| ||||| || ||| || || |
Sbjct 1432 TTACATAACAATGCTGCTGCCACGCGAGCCTCCAGAAGTCTGCAGTGGTGTTCGCCAAGG 1373
Query 6214 GTCCCTGCATAGCGATGAACTTTTTCTTTTCTTCGAATCCATTTATCCAGTTCGCATGTA 6273
| | || || ||||||||||| ||| ||||| || ||| ||||| ||| | || |
Sbjct 1372 GAACTTGAATGGCGATGAACTTCTTC-GGTCTTCAAAGGCATCGATCCAATTCACGTGGA 1314
Query 6274 TGTAATCTGGCTCGCCGTTTTTCGACTCTATCACAACCCGTGAATCGTCCCAACATGGAA 6333
||||||| | || || ||| | |||| |||||| |||| || ||||| | ||||
Sbjct 1313 TGTAATC-CGATCCTCG--TTTAGTGTCTAGCACAACACGTGGATGCTCCCAGTACGGAA 1257
Query 6334 TAT-CGAGATAACGGTTTTT 6352
||| |||| | | |||||||
Sbjct 1256 TATCCGAG-TGAAGGTTTTT 1238
>seq2777
Length=51636
Score = 95.1 bits (104), Expect = 1e-15
Identities = 405/631 (64%), Gaps = 17/631 (3%)
Strand=Plus/Plus
Query 5728 AAATTCTTGAAGTTTTCACCACT-GGTTCAAGCAGATGTCCGCAGCACAGAAGGTCCCAG 5786
|| || | || |||||||| | | |||||||||||||||| || |||||||| ||||
Sbjct 3027 AAGTTGTAGAGGTTTTCACGAGTTGGTTCAAGCAGATGTCTAGTGCGCAGAAGGTTCCAG 3086
Query 5787 TTCTTCCTATACCAGAGTTACAGTGCACGATCATAGGGCTAGAAGACTCTTTGAAATCTT 5846
|||| || | ||| ||| ||||| || | || |||| | || | | |||
Sbjct 3087 TTCTGCCGACGCCATCGTTGCAGTGGACCACCACCGGGCAAAGCAACGCATC-----CTT 3141
Query 5847 CCGAGGATAT--CTTCATGTACCGCTTTTCGTACTCTGTTCGTCATTTTTATGA--AATC 5902
| | | || || |||||| || |||||||| || | | ||| | ||
Sbjct 3142 CGGTTCAAATAGCTCCATGTAGA-CTCGACGTACTCTATTAACCTCTCTTACTCTTACTC 3200
Query 5903 AATGAACCACGCTAAATCGGATGGCATACTATGTTCTGGCCAATGAAGGCACTGGAAGTG 5962
| ||||||| || ||||| || | | ||| ||||| | |||||||||
Sbjct 3201 GACTAACCACGGCAAGTCGGAAGGAGTCTCGTATTCAAACCAATTGCTGTGCTGGAAGTG 3260
Query 5963 AGTTATTTTTCGTGATCGCTGGGTAGTTTTATCAGTAATTTCTAGAAATGTCCGGATATA 6022
| ||| | | ||| || | ||||| || ||||| | | |||||||| ||
Sbjct 3261 ACTTAGCGTCCTAGATGTCTTCAAGGATTTATTCGTGATTTCGATCAGTGTCCGGACGTA 3320
Query 6023 GTTTGGTCTAACTGTGACTCTCAAAGTTTTTATGGTGTATTCTTCCGTAACCAACAAATT 6082
| | ||| | |||||| ||| |||||| ||| | |||| || | | || || |
Sbjct 3321 CTCAGTCCTAGCCGTGACTTTCAGAGTTTTGATGCGGAATTCGTCTATGTCTAATAACGT 3380
Query 6083 GTCTTCATAAGGACACCAATACTGATGACATTTTTCGTTACCACCTTCTTTGATCTTCGT 6142
| ||| | ||||||||||||| | | ||||| ||| | |||| | ||
Sbjct 3381 ATTTTCTCTGGTGCACCAATACTGATAATACTTTTCTCCACCGACAACTTTAGTTGGAGT 3440
Query 6143 TAACATCACTATGACATGGCTATGTTGTTGCCATACAACCTTCCAAAAGTCAGCTACGGT 6202
|||||||||||| |||| | ||| || ||||| | | | |||| |||| || |||
Sbjct 3441 TAACATCACTATTACATAACAATGCTGCTGCCACGCGAGCCTCCAGGAGTCTGCAGTGGT 3500
Query 6203 ATTTTTCATAGGTCCCTGCATAGCGATGAACTTTTTCTTTTCTTCGAATCCATTTATCCA 6262
|| || || | || || ||||||||||| ||| ||||| ||| |||||
Sbjct 3501 GTTCGCCAAGGGAACTTGAATGGCGATGAACTTCTTC-GGTCTTCATTGGCATCGATCCA 3559
Query 6263 GTTCGCATGTATGTAATCTGGCTCGCCGTTTTTCGACTCTATCACAACCCGTGAATCGTC 6322
||||| || ||||| || | | || || |||| |||||| |||| || ||
Sbjct 3560 ATTCGCGTGGATGTAGTCCGATACACC---TTAAATGTCTAGCACAACGCGTGGATGCTC 3616
Query 6323 CCAACATGGAATAT-CGAGATAACGGTTTTT 6352
||| | ||||||| |||| | | |||||||
Sbjct 3617 CCAGTACGGAATATCCGAG-TGAAGGTTTTT 3646
>seq8489
Length=100577
Score = 93.3 bits (102), Expect = 5e-15
Identities = 143/202 (71%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 5614 TTTGCACTGCAGTTAAAAAATACTCTAGCACTCGATGAATGAACATATAGTGCCTCATAC 5673
||||||| | ||||||| || | ||||||| | ||||||| || ||| | ||
Sbjct 80858 TTTGCAC---ATTTAAAAAGTAATGTAGCACTTCACAAATGAACGAGTACTGCTGGAAAC 80802
Query 5674 TTATAATACCCGAGTGTCTTTGCTCACGGATTCTTAGAACTGTTTCCGGTATAGAAATTC 5733
|||||| | | | | || |||||| || | | | ||| || |||||| || |||
Sbjct 80801 TTATAACAGCAGCATATCGTTGCTCGCGCACATTAAAAACCACTTGGGGTATACAAGTTC 80742
Query 5734 TTGAAGTTTTCACCACT-GGTTCAAGCAGATGTCCGCAGCACAGAAGGTCCCAGTTCTTC 5792
| || ||||||| | | |||||||||||||||| || ||||||| |||||||| |
Sbjct 80741 TAGAGGTTTTCATGAGTTGGTTCAAGCAGATGTCTAGTGCGTAGAAGGTTCCAGTTCTGC 80682
Query 5793 CTATACCAGAGTTACAGTGCAC 5814
| || |||| | | ||||||||
Sbjct 80681 CGATGCCAGCGCTGCAGTGCAC 80660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 55391739325006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |