Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_007039.1 Length=17355 Score E Sequences producing significant alignments: (Bits) Value SEQ10566 111 2e-20 seq2777 95.1 1e-15 seq8489 93.3 5e-15 >SEQ10566 Length=10276 Score = 111 bits (122), Expect = 2e-20 Identities = 403/620 (65%), Gaps = 17/620 (3%) Strand=Plus/Minus Query 5739 GTTTTCACCACT-GGTTCAAGCAGATGTCCGCAGCACAGAAGGTCCCAGTTCTTCCTATA 5797 |||||||| | | |||||||||||||||| || |||||||| |||||||| || | Sbjct 1846 GTTTTCACGAGTTGGTTCAAGCAGATGTCTAGTGCGCAGAAGGTTCCAGTTCTGCCGACG 1787 Query 5798 CCAGAGTTACAGTGCACGATCATAGGGCTAGAAGACTCTTTGAAATCTTCCGAGGATAT- 5856 ||| ||| ||||| || | || |||| | || | | |||| | | || Sbjct 1786 CCATCGTTGCAGTGGACCACCACCGGGCAAAGCAACGCATC-----CTTCGGTTCAAATA 1732 Query 5857 -CTTCATGTACCGCTTTTCGTACTCTGTTCGTCATTTTTATGA--AATCAATGAACCACG 5913 || |||||| || |||||||| || | | ||| | || | ||||||| Sbjct 1731 GCTCCATGTAGA-CTCGACGTACTCTATTAACCTCTCTTACTCTTACTCGACTAACCACG 1673 Query 5914 CTAAATCGGATGGCATACTATGTTCTGGCCAATGAAGGCACTGGAAGTGAGTTATTTTTC 5973 || ||||| || | | ||| ||||| | |||||||||| ||| || | Sbjct 1672 GCAAGTCGGAAGGAGTCTCGTATTCAAACCAATTGCTGTGCTGGAAGTGACTTAGCTTCC 1613 Query 5974 GTGATCGCTGGGTAGTTTTATCAGTAATTTCTAGAAATGTCCGGATATAGTTTGGTCTAA 6033 ||| || | ||||| | ||||| | | |||||||| || | | ||| Sbjct 1612 TAGATGTCTTCAAGGATTTATTCATGATTTCGATCAGTGTCCGGACGTACTCAGTCCTAG 1553 Query 6034 CTGTGACTCTCAAAGTTTTTATGGTGTATTCTTCCGTAACCAACAAATTGTCTTCATAAG 6093 | |||||| || |||||| ||| | |||| || | | || || | | ||| | Sbjct 1552 CCGTGACTTTCCGAGTTTTGATGCGGAATTCGTCTATGTCTAATAACGTATTTTCTCTGG 1493 Query 6094 GACACCAATACTGATGACATTTTTCGTTACCACCTTCTTTGATCTTCGTTAACATCACTA 6153 ||||||||||||| | | ||||| ||| | |||| | ||||||||||||| Sbjct 1492 TGCACCAATACTGATAATACTTTTCTCCACCGACAACTTTAGTTGGAGTTAACATCACTA 1433 Query 6154 TGACATGGCTATGTTGTTGCCATACAACCTTCCAAAAGTCAGCTACGGTATTTTTCATAG 6213 | |||| | ||| || ||||| | | | |||| ||||| || ||| || || | Sbjct 1432 TTACATAACAATGCTGCTGCCACGCGAGCCTCCAGAAGTCTGCAGTGGTGTTCGCCAAGG 1373 Query 6214 GTCCCTGCATAGCGATGAACTTTTTCTTTTCTTCGAATCCATTTATCCAGTTCGCATGTA 6273 | | || || ||||||||||| ||| ||||| || ||| ||||| ||| | || | Sbjct 1372 GAACTTGAATGGCGATGAACTTCTTC-GGTCTTCAAAGGCATCGATCCAATTCACGTGGA 1314 Query 6274 TGTAATCTGGCTCGCCGTTTTTCGACTCTATCACAACCCGTGAATCGTCCCAACATGGAA 6333 ||||||| | || || ||| | |||| |||||| |||| || ||||| | |||| Sbjct 1313 TGTAATC-CGATCCTCG--TTTAGTGTCTAGCACAACACGTGGATGCTCCCAGTACGGAA 1257 Query 6334 TAT-CGAGATAACGGTTTTT 6352 ||| |||| | | ||||||| Sbjct 1256 TATCCGAG-TGAAGGTTTTT 1238 >seq2777 Length=51636 Score = 95.1 bits (104), Expect = 1e-15 Identities = 405/631 (64%), Gaps = 17/631 (3%) Strand=Plus/Plus Query 5728 AAATTCTTGAAGTTTTCACCACT-GGTTCAAGCAGATGTCCGCAGCACAGAAGGTCCCAG 5786 || || | || |||||||| | | |||||||||||||||| || |||||||| |||| Sbjct 3027 AAGTTGTAGAGGTTTTCACGAGTTGGTTCAAGCAGATGTCTAGTGCGCAGAAGGTTCCAG 3086 Query 5787 TTCTTCCTATACCAGAGTTACAGTGCACGATCATAGGGCTAGAAGACTCTTTGAAATCTT 5846 |||| || | ||| ||| ||||| || | || |||| | || | | ||| Sbjct 3087 TTCTGCCGACGCCATCGTTGCAGTGGACCACCACCGGGCAAAGCAACGCATC-----CTT 3141 Query 5847 CCGAGGATAT--CTTCATGTACCGCTTTTCGTACTCTGTTCGTCATTTTTATGA--AATC 5902 | | | || || |||||| || |||||||| || | | ||| | || Sbjct 3142 CGGTTCAAATAGCTCCATGTAGA-CTCGACGTACTCTATTAACCTCTCTTACTCTTACTC 3200 Query 5903 AATGAACCACGCTAAATCGGATGGCATACTATGTTCTGGCCAATGAAGGCACTGGAAGTG 5962 | ||||||| || ||||| || | | ||| ||||| | ||||||||| Sbjct 3201 GACTAACCACGGCAAGTCGGAAGGAGTCTCGTATTCAAACCAATTGCTGTGCTGGAAGTG 3260 Query 5963 AGTTATTTTTCGTGATCGCTGGGTAGTTTTATCAGTAATTTCTAGAAATGTCCGGATATA 6022 | ||| | | ||| || | ||||| || ||||| | | |||||||| || Sbjct 3261 ACTTAGCGTCCTAGATGTCTTCAAGGATTTATTCGTGATTTCGATCAGTGTCCGGACGTA 3320 Query 6023 GTTTGGTCTAACTGTGACTCTCAAAGTTTTTATGGTGTATTCTTCCGTAACCAACAAATT 6082 | | ||| | |||||| ||| |||||| ||| | |||| || | | || || | Sbjct 3321 CTCAGTCCTAGCCGTGACTTTCAGAGTTTTGATGCGGAATTCGTCTATGTCTAATAACGT 3380 Query 6083 GTCTTCATAAGGACACCAATACTGATGACATTTTTCGTTACCACCTTCTTTGATCTTCGT 6142 | ||| | ||||||||||||| | | ||||| ||| | |||| | || Sbjct 3381 ATTTTCTCTGGTGCACCAATACTGATAATACTTTTCTCCACCGACAACTTTAGTTGGAGT 3440 Query 6143 TAACATCACTATGACATGGCTATGTTGTTGCCATACAACCTTCCAAAAGTCAGCTACGGT 6202 |||||||||||| |||| | ||| || ||||| | | | |||| |||| || ||| Sbjct 3441 TAACATCACTATTACATAACAATGCTGCTGCCACGCGAGCCTCCAGGAGTCTGCAGTGGT 3500 Query 6203 ATTTTTCATAGGTCCCTGCATAGCGATGAACTTTTTCTTTTCTTCGAATCCATTTATCCA 6262 || || || | || || ||||||||||| ||| ||||| ||| ||||| Sbjct 3501 GTTCGCCAAGGGAACTTGAATGGCGATGAACTTCTTC-GGTCTTCATTGGCATCGATCCA 3559 Query 6263 GTTCGCATGTATGTAATCTGGCTCGCCGTTTTTCGACTCTATCACAACCCGTGAATCGTC 6322 ||||| || ||||| || | | || || |||| |||||| |||| || || Sbjct 3560 ATTCGCGTGGATGTAGTCCGATACACC---TTAAATGTCTAGCACAACGCGTGGATGCTC 3616 Query 6323 CCAACATGGAATAT-CGAGATAACGGTTTTT 6352 ||| | ||||||| |||| | | ||||||| Sbjct 3617 CCAGTACGGAATATCCGAG-TGAAGGTTTTT 3646 >seq8489 Length=100577 Score = 93.3 bits (102), Expect = 5e-15 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 5614 TTTGCACTGCAGTTAAAAAATACTCTAGCACTCGATGAATGAACATATAGTGCCTCATAC 5673 ||||||| | ||||||| || | ||||||| | ||||||| || ||| | || Sbjct 80858 TTTGCAC---ATTTAAAAAGTAATGTAGCACTTCACAAATGAACGAGTACTGCTGGAAAC 80802 Query 5674 TTATAATACCCGAGTGTCTTTGCTCACGGATTCTTAGAACTGTTTCCGGTATAGAAATTC 5733 |||||| | | | | || |||||| || | | | ||| || |||||| || ||| Sbjct 80801 TTATAACAGCAGCATATCGTTGCTCGCGCACATTAAAAACCACTTGGGGTATACAAGTTC 80742 Query 5734 TTGAAGTTTTCACCACT-GGTTCAAGCAGATGTCCGCAGCACAGAAGGTCCCAGTTCTTC 5792 | || ||||||| | | |||||||||||||||| || ||||||| |||||||| | Sbjct 80741 TAGAGGTTTTCATGAGTTGGTTCAAGCAGATGTCTAGTGCGTAGAAGGTTCCAGTTCTGC 80682 Query 5793 CTATACCAGAGTTACAGTGCAC 5814 | || |||| | | |||||||| Sbjct 80681 CGATGCCAGCGCTGCAGTGCAC 80660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 55391739325006