Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 237 1e-57
seq4182 122 7e-23
seq3626 100 2e-16
seq688 89.7 4e-13
seq2867 86.0 5e-12
seq2492 84.2 2e-11
>seq4146
Length=100757
Score = 237 bits (262), Expect = 1e-57
Identities = 354/498 (71%), Gaps = 6/498 (1%)
Strand=Plus/Minus
Query 32170 CGTCGCTGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGT 32229
||||| || |||||||| || ||||| || ||| | || |||||| |||| || ||
Sbjct 16629 CGTCGGAGCTTATTTTGTGGAGTGGGGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGT 16570
Query 32230 GCCGTTGCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGG 32289
|| | || ||| | | ||||| | ||||||||||| || || || ||||| |||||
Sbjct 16569 ACCCATTCCAAATCTTACACATCTTCTTTACGGATTTATCCCCATCTGTGGCGGTGACGG 16510
Query 32290 ACTAAACGATGCCCTCAAAACGATACCG--GGCAGTTTTGAGGCGCTGCAACGTTCGTGC 32347
| | ||||| | | ||| || | || || ||||| | || ||||| | || |||
Sbjct 16509 AATTAACGA--CAGTTTAAAAGAAATCGAAGGAAGTTTCCAAGCTTTGCAAAGATCTTGC 16452
Query 32348 AAAGGCCGCGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCG 32407
| || || | ||||| || ||| | || || ||||||||||| || ||||||||||
Sbjct 16451 AGCGGGCGAGAGGACTTCAAAGTTTCTATCCATGACCCTTGGGCAGCTTTACAAAAACCA 16392
Query 32408 CAGAAGGGCGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCG 32467
|||||||| |||| | ||||||||||| ||||||||||||||||| ||| ||||| |
Sbjct 16391 CAGAAGGGTTTGTCCTCCTGGAACGAACCTTACAAAGGCAACTTTGGACAACTGATGTCT 16332
Query 32468 GCCAAGTTGGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCG 32527
|| || | ||| | | || || | ||||| || || || ||||| || |
Sbjct 16331 TTGAAACAAGCTAGACCTGATTTGAAGGTTCTTCCATCAATCGGAGGCTGGACACTGGCA 16272
Query 32528 GATCCCTTTTATTTTATGCACGACGCGG-AAAAACGGCACGTGTTTGTCGATTCCGTCAA 32586
||||| || || ||| | | || || ||||| | ||| ||||| | || || ||
Sbjct 16271 GATCCATTCTACTTTTTTGATGATAAGGTAAAAAGAGATCGT-TTTGTGGCATCAGTGAA 16213
Query 32587 AGAGTTTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGG 32646
||| || | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct 16212 AGACTTCCTCCAAACTTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGG 16153
Query 32647 CGGCAAAGGTGCCAACCC 32664
|| |||||||| || ||
Sbjct 16152 TGGAAAAGGTGCTAATCC 16135
>seq4182
Length=188933
Score = 122 bits (134), Expect = 7e-23
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341
|| |||||| || || || ||||| || ||||| |||||||| ||| |||| |||| |
Sbjct 74502 AACAATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGC 74443
Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||| ||| ||| | | |||||| |||||| ||||||||||| | || ||
Sbjct 74442 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGA 74383
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
||||||| | | || | ||| || ||||| | ||||||| | || | |||| ||
Sbjct 74382 TCAGCAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTA 74323
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAA 115516
|| ||||| || |||||||| ||||| | |||||||| || ||||||| |||
Sbjct 74322 CAATATTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGGTAAA 74268
>seq3626
Length=201135
Score = 100 bits (110), Expect = 2e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341
||||||||| || || || || || ||||| ||||||||||| ||| | || ||| |
Sbjct 59061 AAAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAG-C 59119
Query 115342 CAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400
|| | || || ||| | | |||||| |||||| || |||||||| |||| |
Sbjct 59120 CATCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCG 59179
Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460
||||||| ||||||| | || || ||||| | ||||||| || | | ||||
Sbjct 59180 ATCAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATT 59239
Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
| ||||||||||| || ||||| | || |||| || | || ||||| ||||
Sbjct 59240 ACAACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGAA 59293
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/200 (72%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||||||||| ||||| ||||| || || || |||||| | ||| ||| |||
Sbjct 59292 AATGCAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAG-CCAT 59350
Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
| || ||| | | | | ||||| ||||| || ||||||||| |||| || |
Sbjct 59351 CAGATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACC 59410
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
||||| | || |||| ||| || ||||| | ||||| | ||| | | || || |
Sbjct 59411 AGCAACGGCTCATTTTTGCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACA 59470
Query 115464 ACATTCAAAAAGAGTCTACT 115483
|||||||||||||||| |||
Sbjct 59471 ACATTCAAAAAGAGTCCACT 59490
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || || || ||||| |||||||| | ||| || |
Sbjct 59521 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAACCTTCA 59580
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | || ||| ||||| || || |||||| |||| || ||
Sbjct 59581 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 59640
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| |||| || | ||| || |||||||| ||||||| |||| || | || || |||
Sbjct 59641 CAGCGACTCATCTTTGCTGGAAAACAATTGGAAGATGGGCGAACCCTGTCTGACTACAAC 59700
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||||||| ||| | || | || || | ||||||| ||
Sbjct 59701 ATTCAAAAAGAGTCCACTCTTCACCTTGTACTGCGTCTGCGAGGTGG 59747
>seq688
Length=109112
Score = 89.7 bits (98), Expect = 4e-13
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 109047 CGGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAAT 109106
|||||| || ||| | || || ||||| ||||||||||| || || |||||||| |||||
Sbjct 9875 CGGATTCTACTATCTAGGCCGGGGCGATGAAGTGCGCTGTGCTTTCTGCAAAGTCGAAAT 9816
Query 109107 AATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTG 109166
||| | ||| | || || ||||| || || || || ||| |||| | || || || ||
Sbjct 9815 CATGAGATGGGTGGAAGGGGACGATCCTGCTGTAGATCATCAAAGGTGGGCACCCCAATG 9756
Query 109167 TCCGTTC 109173
||| |||
Sbjct 9755 TCCATTC 9749
>seq2867
Length=333652
Score = 86.0 bits (94), Expect = 5e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 112403 GTTGCCTAGGTCACCGACGTGTCGCTCGGCGGCGTCGGGTGCGCCATGGTCTTGGTTCGT 112462
|||||| || ||||| ||||||| ||| ||||| || ||||| || || || | |
Sbjct 230855 GTTGCCCAGATCACCTACGTGTCTGACGGATGCGTCAGGGGCGCCGTGCTCCTGTTGCCG 230914
Query 112463 GGGGTTAAAATGCTCGCCCGCCGACGTGCACCCGTTGCTAGTGTCGCCAAACTCGTGCAC 112522
||| || || ||| | |||||||||||||| ||||| | |||| |||||||| || |
Sbjct 230915 GGGATTGAAGTGCGCCCCCGCCGACGTGCAGCCGTTTGTGTTGTCTCCAAACTCATGGAT 230974
Query 112523 GTGAAAACCGTG 112534
||| || || ||
Sbjct 230975 GTGGAACCCATG 230986
>seq2492
Length=83244
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||||||||| || | || || ||||||||||| | ||| ||| ||| |
Sbjct 41456 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAG-CCATC 41398
Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| | | || || |||||| || ||||| || |||| || ||
Sbjct 41397 GGACACTATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCA 41338
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || || | ||| ||||| || | ||||||| || | | || || ||
Sbjct 41337 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCTCTGACTACAA 41278
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| |||||||| || || | ||| |||| |||||||| |||| ||
Sbjct 41277 TATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425134783787080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |