Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008000.1 Length=14531 Score E Sequences producing significant alignments: (Bits) Value SEQ24316 80.6 2e-11 seq1441 78.8 9e-11 >SEQ24316 Length=11200 Score = 80.6 bits (88), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 10508 CAGCCGTTCTGAAGTTATAAATAGCGTCCCTAACAAGACTTTGTTTTATATGTATAGCTA 10567 |||||||||| |||||||||||| || |||||| ||||| ||||||||||||| || Sbjct 11000 CAGCCGTTCTTGAGTTATAAATAGTGTAACTAACACCACTTTCTTTTATATGTATA-TTA 10942 Query 10568 GATAGATATTTAGATTATGTA 10588 ||||||| |||||| || || Sbjct 10941 TATAGATACTTAGATAATTTA 10921 >seq1441 Length=358228 Score = 78.8 bits (86), Expect = 9e-11 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 10508 CAGCCGTTCTGAAGTTATAAATAGCGTCCCTAACAAGACTTTGTTTTATATGTATAGCTA 10567 |||||||||| ||||||||||||| || ||||||| ||||| |||||||||||||| || Sbjct 219712 CAGCCGTTCTTAAGTTATAAATAGTGTAACTAACAACACTTTCTTTTATATGTATAGATA 219653 Query 10568 G 10568 | Sbjct 219652 G 219652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46359156356198