Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4146 260 1e-64 seq3626 105 5e-18 SEQ23448 95.1 1e-14 seq2492 91.5 1e-13 seq4182 82.4 6e-11 >seq4146 Length=100757 Score = 260 bits (288), Expect = 1e-64 Identities = 785/1193 (66%), Gaps = 33/1193 (3%) Strand=Plus/Plus Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888 |||||||| ||||| | | || ||| | || || ||||||||||| ||||||||||| Sbjct 15445 ATATTCATAGCATTCAATAAGTCCCCAGTATCTGCATCTATTTCCCACGCAAACAAACCA 15504 Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATAT 95948 || | ||| || | | ||||| ||||| ||||||| || | | || ||| Sbjct 15505 CCGAGCTTATTATTTCTAACATACTTTCCTTTCTCTATAACGGATCTTGGATTGTCGTAT 15564 Query 95949 GAAATTAAATCGCCTTTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCA-AA 96007 | ||||| || ||| ||| | || ||||| | |||| ||| || || ||| || Sbjct 15565 GTAATTAGGTCCCCTGTGGCAGGACGGAAGACGTATGGCGCTTGTGCCACATTATCATAA 15624 Query 96008 TTTAACA---ATATATTTGTTT--ATTTCGTTTTTGATTTGGCGATAATCAACAACGCCA 96062 | ||| || | || | ||||| ||| || | | || || || || ||| Sbjct 15625 TGGAACTCCCATTTCCCTGCTGCAATTTCATTTGCAATCTCTCTGTAGTCGACCACACCA 15684 Query 96063 TCTTCCCAAGTGCCCGAA-ACGGGCCCGTTACTACTTCCCAAAAAATAGTTATCGTTTTC 96121 || | ||| || || | | || || || ||||| | ||| | |||| | | Sbjct 15685 TCCTGCCAGGTCCCTTTACAAGGACCTGTGGCTACTCCAGTGAAAGGA-TTATTATCTGT 15743 Query 96122 GTAATTTGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTGCG 96181 ||| ||| ||||||||||| || ||||| ||||| || || || || ||||| || Sbjct 15744 GTAGTTTTGGACTCCAGTCCAACCACGACCATACATCGCTACACCAACTATAATCTTCTT 15803 Query 96182 CGGGTCCACGCCTTGATTTGTGAGCAATTTAACGGCATGGTCCGTGTTGTACAGCTCGTT 96241 |||| || ||||| | ||| |||||| || ||| || |||| || || Sbjct 15804 AGGGTTGACTCCTTGGGCTAAGAGGTTTTTAACTCCAAAGTCAGTTGTGTAGGTTTCCTT 15863 Query 96242 TGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAA---TCAATGTTTGACCA 96298 ||| ||||| || ||||||| | ||||| | ||| | | ||| |||||||| Sbjct 15864 TGGATTCCATGCAGGTGCGTACAACGGTGTTTGATGTCCAAGAGTGTCA---TTTGACCA 15920 Query 96299 CGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACGTC 96358 ||| |||||||| ||||| ||||| | || || | || | | | || || Sbjct 15921 CGCTCCTTTAAAGTCGTAACTCATTAAGAAGATATGATCCATATATTGCTGAGCTTTCCT 15980 Query 96359 GTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTACGT 96418 ||| | ||||| ||||| || || ||||| || || ||||| || || | Sbjct 15981 GTAGTCAACTACTTGGATTTTATCCCAACCAGCACTAATAGCGGATGTCAGTTCATATTT 16040 Query 96419 TTTGCCCGTTT--GCAGTTGCAACTCGTCTAACATCACGCGCAATTCCTTTAATAGAATG 96476 || || || | || | | ||||||| | ||| | || || || ||| ||| | Sbjct 16041 CTTACCAGTCTCTGCGGAT--AACTCGTTCAGCATTTCACGTAACTC-TTTCATAA---G 16094 Query 96477 TTGTACGTGTCAGCGTCGCGCTC-TTTGTTGC--CGAGCGTCGGGTTGGCGCCTTTACCG 96533 || |||| | | || | || |||| | | |||| | || || || ||||| || Sbjct 16095 CTGGACGTA--AACTTCACCGTCATTTGGTCCACCGAGGTTAGGATTAGCACCTTTTCCA 16152 Query 96534 CCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTCT 96593 || || || ||||| || ||||| || || ||||| ||||||||| || | || ||| Sbjct 16153 CCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTCCAAGTTTGGAGGAAGTCT 16212 Query 96594 CTGACGGAGTCTACAAACACGCGCCGTTTTT-CCGCGTCGTGCATGTAATAGAACGGGTC 96652 | || || | ||||| ||| | ||||| || || | | | ||||| || || Sbjct 16213 TTCACTGATGCCACAAA-ACGATCTCTTTTTACCTTATCATCAAAAAAGTAGAATGGATC 16271 Query 96653 GGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGTTTGGC 96712 | |||||||||||| ||||| || || |||| || | | || |||| |||| Sbjct 16272 TGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATCAGGTCTAGCTTGTTTCAA 16331 Query 96713 CGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCCTTTTG 96772 | ||||| || ||||||||||||||||| || |||||||| | |||| ||||| || Sbjct 16332 AGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCAGGAGGACAAACCCTTCTG 16391 Query 96773 CGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGGCCCTG 96832 |||||||||| || ||||||||||| || |||| |||||| || || || || Sbjct 16392 TGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTTGAAGTCCTCTCGCCCGCT 16451 Query 96833 GCAAGAGCGTTGCAGCGCTTCAAAACTACC--GGGTATGGTTTTAAGGGCATCGTTAAGG 96890 |||||| | ||||| |||| ||||| || | | | ||| || | ||||||| Sbjct 16452 GCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTCTTTTAAACTG--TCGTTAATT 16509 Query 96891 CCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGGCAGCGGC 96950 ||||| |||||||| ||||| ||||| ||||| | | ||||| | || || | || Sbjct 16510 CCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGATGTGTAAGATTTGGAATGGGT 16569 Query 96951 ACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGC 97003 || || || || || || || | | || || ||||| ||||||||||| || Sbjct 16570 ACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCACAAAATAAGC 16622 >seq3626 Length=201135 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | |||||| | || || |||||||| ||||| ||||||||||| | | Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | || ||||||||||| || ||| | || || ||||||||||| ||| Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || ||| || || | | | ||||| || || Sbjct 59627 ATGCCTTCCTTGTCCTGGATTTTGGCT--TTGACATTCTCAATTGTGTCTGAAGGTTCAA 59570 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || ||||| ||||| || || || || ||||| |||||||| Sbjct 59569 CTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || || | || || |||||||| ||||| ||||||||||| | Sbjct 59519 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAA 59460 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| |||| ||||| || ||| |||| ||||| || |||||| ||| Sbjct 59459 AGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGG 59400 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| |||||||| |||| | ||| || | | | ||| || ||||| | Sbjct 59399 ATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACT 59340 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||| || || || || || || ||||| |||||||| |||||| Sbjct 59339 TCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCATT 59292 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || || | || || |||||||| ||||| ||||||||||| | | Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | || |||| |||||| || ||| | || || ||||||||||| ||| Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || ||| || || | | | ||||| || || Sbjct 59855 ATGCCTTCCTTGTCCTGGATTTTAGCT--TTGACATTCTCAATTGTGTCTGAAGGTTCAA 59798 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || ||||| || || || |||||||| |||||||| Sbjct 59797 CTTCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | | ||||| |||| ||||| |||||||| ||||| ||||| | Sbjct 60203 CCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAA 60144 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | || |||| ||| || || ||| | ||||| ||||||||||| ||| Sbjct 60143 AGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGG 60084 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || ||| || || | | | ||||| || || Sbjct 60083 ATGCCTTCCTTGTCCTGGATTTTGGCT--TTGACATTCTCAATTGTGTCTGAAGGTTCAA 60026 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || ||||| ||||| || || || |||||||| |||||||| Sbjct 60025 CTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977 >SEQ23448 Length=38375 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 29344 GGCGGCGTGGGGCTGAATCTAACGGGCGGCAACCACCTCGTTTTGTTGGAGCCGCACTGG 29403 || |||||||| ||||| || || | ||||||||| | || |||| || |||||| Sbjct 9690 GGTGGCGTGGGACTGAACCTGTGCGGGGCCAACCACCTGCTGGTGCTGGACCCCCACTGG 9749 Query 29404 AACCCGCAGGTGGAGTTGCAGGCGCAGGGCCGCATCCACCGTTTGGGCCAGC 29455 ||||||||| | ||| ||||||||||| ||||||| |||| ||||||||| Sbjct 9750 AACCCGCAGCTCGAGCAGCAGGCGCAGGACCGCATCTACCGCGTGGGCCAGC 9801 >seq2492 Length=83244 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| | |||||||||| ||| || ||||| || ||||| || |||||||| | Sbjct 40545 CCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGA 40604 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | || || | || ||||| ||| | || |||| ||| ||||| || Sbjct 40605 GAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGG 40664 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||||||||| |||| ||| || | | | |||||| ||||| Sbjct 40665 GATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAAC 40724 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||||| || |||| || ||||| ||||||||||| Sbjct 40725 TTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| | |||||||||| ||| || ||||| || ||||| || |||||||| | Sbjct 41229 CCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGA 41288 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | || || | || ||||| ||| | || |||| ||| ||||| || Sbjct 41289 GAGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGG 41348 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||||||||| ||||| ||| || | | | |||||| ||||| Sbjct 41349 GATACCCTCTTTGTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAAC 41408 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || |||||||| || |||| || ||||||||||||||||| Sbjct 41409 TTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| | |||||||||| ||| || ||||| || ||||| || |||||||| | Sbjct 41001 CCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGA 41060 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | || || | || ||||| ||| | || |||| ||| ||||| || Sbjct 41061 GAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGG 41120 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||||||||| |||| ||| || | | | |||||| ||||| Sbjct 41121 GATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAAC 41180 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||||| || |||| || ||||| ||||||||||| Sbjct 41181 TTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| | |||||||||| ||| || ||||| || || || || |||||||| | Sbjct 41457 CCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGA 41516 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | || || | || ||||| ||| | || |||| ||| ||||| || Sbjct 41517 GAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGG 41576 Query 16828 CACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||||||||| ||||| ||| || || | | | ||||| ||||| Sbjct 41577 GATACCCTCTTTGTCTTGAATTTTGGCT--TTAACATTTTCAATGGTGTCTGATGGCTCA 41634 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| | ||||||||||| || || | || ||||| |||||||||||| Sbjct 41635 ACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATCTGCATT 41685 >seq4182 Length=188933 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/235 (69%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 16704 TTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGT 16763 |||||| ||||| || ||||| || | ||| | ||| |||||||| || || ||||||| Sbjct 74268 TTTACC-TCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGT 74326 Query 16764 CGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCA 16823 ||| | || | | || |||| ||||| || ||| | || | || || || ||| Sbjct 74327 CGGATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCG 74386 Query 16824 CAGGCACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGG 16881 || | || ||||| || ||||| ||| || || | | | ||| ||| | Sbjct 74387 GTGGAATACCTTCTTTATCTTGAATTTTGGCT--TTTACATTTTCAATAGTATCGGAAGC 74444 Query 16882 CTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || | |||||||||||| || || || ||||| || || ||||||||| Sbjct 74445 CTCCACCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCATT 74499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404888747213410