Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4459 616 2e-171 seq409 105 8e-18 >seq4459 Length=154925 Score = 616 bits (682), Expect = 2e-171 Identities = 1211/1779 (68%), Gaps = 24/1779 (1%) Strand=Plus/Minus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || || | ||| ||||| || | | | ||| ||||| ||||||| ||| ||||| || Sbjct 144009 TTATCTACTGTAAATTGGATTGCATTTGCTGCAGGTTTTGTACGTAAATAATACATGCCT 143950 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 ||||||| ||| | |||| | |||||||| || ||| ||||| |||| | || Sbjct 143949 GTTTTTAAACCCATTTTCCAAGCATAAAAATGTATGGACGTCAGTTTACCATAATTTGGT 143890 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || |||| ||| ||||| | ||| |||||||| || || || || || || || |||||| Sbjct 143889 TCAGCTACATGAATATTAAAAGACTGACTTTGGTCTATAAATGCACCTCTATCAGCAGCC 143830 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 62079 || | ||| | || || | ||||||||| | || ||||| || || || | |||| Sbjct 143829 ATCTGAATAGTAGTTTTCACAGAAATTTCCCATACTGTCTTATACAAATCTCTGA-TATC 143771 Query 62080 TTCTGGAAG-GTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62136 || |||| |||| ||||||||| || ||| || | ||| ||| || || Sbjct 143770 TTTGGGAATAGTTTCAATATTCTGAACTGAACCATTATTATGAAGAATAAGATTTTTCAT 143711 Query 62137 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62196 ||||| | |||||| | | | || ||| |||| | ||||| ||||||| ||||| Sbjct 143710 GTCATCGTCCCATAAATCTGCTTGAGTCAAATCTCTTAAAAGATGATGATTAACGACTTG 143651 Query 62197 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 62256 |||||| || || ||||||| | ||| ||||| || | ||||| | || || Sbjct 143650 AAATTCGCCTGATAATACTCGTCTTTGGTATATATTTGAAGTGAATGGTTCAAAGGATTC 143591 Query 62257 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62316 |||||| || | || ||||| || ||||| || |||||||| |||| | | | ||| Sbjct 143590 ATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATAGGCGCCAGTAGCAGAGAATT 143531 Query 62317 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62374 | || || ||||| | ||||| ||||| |||| |||||| ||| ||||| | Sbjct 143530 ACGAATTCC--ATGTTTAGCTATTTTTTCTTTAAGAGCAACCCAATCCCAGAGATCAGTG 143473 Query 62375 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATA 62433 || ||| | ||| || | || | | || | ||| |||| Sbjct 143472 GGAGTCTTATTCCACATATCAAATTGCAAAATCCCTTGGCTAACAGGACTA-CCTTCATA 143414 Query 62434 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 62493 || | || ||| || ||||| |||| |||||| || || || || || |||||||| Sbjct 143413 TGAACTATAAACTCCCTCTTTCTCTGCTAATTCACAGCTAGCTTCCAAAGCTCCGTAATA 143354 Query 62494 AATGGTTTCGAAGATCTTCTTATTTAG--ATCTTGCGCTTCCAGGCTATCAAATGGATAA 62551 || || || || |||| | |||| | ||| || || || ||| | || || Sbjct 143353 GATAGTCTCAAATATCTGTTGGTTTAACAACAATGCTTTTTCA--CTTTCATAAGGGTAG 143296 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 | || | ||| || || ||||| ||||| || |||||||| || |||||||||| | Sbjct 143295 CGCATCAGCACAAAGGCATCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTCGC 143236 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 |||| ||| ||| ||||||||||| ||||||||||| | ||||||||||||||| || Sbjct 143235 ATATTGGAGTTTTTAGCTTCTGGAACTGGATAATAATTGACATCTATAATTTTATTAAGG 143176 Query 62672 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---CATCT 62728 ||| || | ||| || || || | || ||||| || | |||| Sbjct 143175 TTTTGTGTTATGATTTTTGTAACTTCTTTTAACTTTCCAAAATTGTATGTTCTATCATCA 143116 Query 62729 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62788 |||||||||| ||||| |||| ||| || | |||||| || ||||| |||| | Sbjct 143115 TTTACAAACATATTCAAAGCAATAGAAGCTAAATTACATACTGCTACTTCATCTACTGAT 143056 Query 62789 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 62848 | ||||| || ||| || || || ||||||||||| || || ||||||| ||||| ||| Sbjct 143055 GTATATTCTACTATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTTCTGA 142996 Query 62849 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 62908 ||||||||| ||||||| | ||| || || | ||||||||||| || ||||||| || Sbjct 142995 TTACTCTTTCTGTTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAACTTGT 142936 Query 62909 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT 62968 | ||||| ||| || ||||| | ||| | ||| ||| | | || | |||||| | Sbjct 142935 GCTTCTACAATAGCCTTCCATAAAACTTGTGCCCTTACTT--GTTTGACAAATCTTTTTT 142878 Query 62969 CTTTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026 | ||| ||| | | ||||| ||| ||||| ||||||||| || ||| |||| Sbjct 142877 CATTCTCATACTTTTCATACAGAGCTTCAAACTCTTCTCCCCAACAATCTGCCAAACCAG 142818 Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086 |||| |||| ||||||||||| ||| | | | | | | |||| ||||||||| | Sbjct 142817 GACAGTCATGGGGACACATCAAACTCCAATTTTCATTTTTTTCAACTCTTTTCATAAACA 142758 Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146 ||| || ||||| | ||| ||| | || || | || | ||| || || || |||| Sbjct 142757 AATCTGGTATCCATAAAGCATAAAACAATTCCCTAGCTCGAACTTCTTCTTTGCCAGTAT 142698 Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206 ||||||| ||||| | ||| | | | ||| |||||||| ||||| || |||| || | Sbjct 142697 TCTTTTTCAGATCTAAAAACTCAAACACATCTGAATGCCATGGTTCTAAATATACAGCAA 142638 Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266 | || || || ||||| || || ||||||| ||||| || ||| | ||||| |||| Sbjct 142637 ATGCCCCTGGACGCTTGTTACCACCTTGATCTACATATCTGGCTGTGCTGTTATATACTC 142578 Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGG 63326 | |||||||| | || ||||| ||| |||||| || || | ||| | | || | | Sbjct 142577 TTAACATTGGGACAAGTCCATTTGATACACCATTTGTGCCAGCTATACATGTACCTTTAG 142518 Query 63327 CACGAATATTACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63385 | | ||| || ||| || || || || ||||| |||||| || || || ||| Sbjct 142517 CTCTGATACAGTGAACATGA-AGCCCAATGCCACCTGCAGATTTAGATATCAAGGCACAT 142459 Query 63386 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 63445 |||| | || ||||| || ||||| ||||| ||||| ||||| | || ||||| Sbjct 142458 TGTTTCAGAGTGTCATATATTCCCTCAATACTGTCATCTTTCATGGCCAATAAGAAACAA 142399 Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 |||| ||| | | ||| | ||| |||||| |||||| |||||||| || Sbjct 142398 GATGACAATTGAGGTCTTGGAGTAGCAGCAGAAAATAAAGTAGGACTGGCGTGAGTGAAA 142339 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63565 | || ||||| | || || || || | ||||||||| || || || | ||| ||| Sbjct 142338 TACTTCTCAGACAATAAGTTATAGGTGTTAATAGCTGAATCAATGTCTTCTCCATGTATT 142279 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 || | || |||||||||| ||| || || ||||| ||| Sbjct 142278 CCAATAGCTACACGCATTAGCATATGTTGTGGTCTCTCA 142240 >seq409 Length=488447 Score = 105 bits (116), Expect = 8e-18 Identities = 134/182 (74%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| || |||||||| || | |||||| || || ||||| || || || ||| Sbjct 75215 CCAGGCATGAGTCCACGCTTCTTTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAA 75274 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT--CATGTA 32838 || || ||||| || ||||| || |||| | |||||| | ||| | | | || | Sbjct 75275 ATACCCTCTACAGCTGCAAATGCTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCA 75334 Query 32839 -TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||| | | | ||||| || ||||||||||| |||||||||| || |||||||||||| Sbjct 75335 ATCCATTGTAGTGCCCAGTCCGCCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTA 75394 Query 32898 AA 32899 || Sbjct 75395 AA 75396 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/111 (78%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 ||| || || |||| |||| |||||||||||| || |||||||| || || || || ||| Sbjct 76494 TCAATGTTACCTTT-GATAAATCCACTTCTTCAACAGTCCAAAAGGAAGCTTCGGCTTTT 76552 Query 33195 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245 || ||||| | ||| || || |||| || || || || |||||||||||| Sbjct 76553 TTGTACATTTCCCAAATATCTGGATACTGGATAGGGAATATAACAAATCTA 76603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633312340576400