Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq4146 208 8e-49 seq2867 89.7 6e-13 >seq4146 Length=100757 Score = 208 bits (230), Expect = 8e-49 Identities = 525/794 (66%), Gaps = 17/794 (2%) Strand=Plus/Plus Query 51652 CATAGTCGGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGT 51711 || |||| || ||||| |||| | || |||||| || ||| ||| | || || | Sbjct 15839 CAAAGTCAGTTGTGTAGGTTTCCTTTGGATTCCATGCAGGTGCGTACAACGGTGTTTGAT 15898 Query 51712 AGCCCAGATCGGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAAT 51771 || ||| | || |||||||| || || || ||||| |||| | ||| || | || Sbjct 15899 GTCCAAGAGTGTCATTTGACCACGCTCCTTTAAAGTCGTAACTCATTAAGAAGATATGAT 15958 Query 51772 CCAACTGCGTCTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGA 51831 ||| | ||| || |||||| || ||||| |||||||| | || || || | Sbjct 15959 CCATATATTGCTGAGCTTTCCTGTAGTCAACTACTTGGATTTTATCCCAACCAGCACTAA 16018 Query 51832 TGGCGCTGGTCAACAGGTACGAACGGTTC------GTGGCGGCGCTCAACTCGTCGAGCA 51885 | ||| |||| || | | ||| || | ||| ||||||| |||| Sbjct 16019 TAGCGGATGTCA----GTTCATAT--TTCTTACCAGTCTCTGCGGATAACTCGTTCAGCA 16072 Query 51886 TGTCGCGCAGCTCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCA 51945 | || || | ||| ||| |||| ||||| |||| || || || | || | Sbjct 16073 TTTCACGTAACTCTTTCATAAGCTGGACGTAAACTTCACCGTC---ATTTGGTCCACCGA 16129 Query 51946 GGTCGGGATTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGA 52005 ||| ||||| || ||||| || || || |||||||| || | ||| || || ||||||| Sbjct 16130 GGTTAGGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGA 16189 Query 52006 ACTTCCAAGTCAGCAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGT 52065 | |||||||| | || || || || ||| | || || | | ||| | | Sbjct 16190 ATTTCCAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTTACCTTAT 16249 Query 52066 CGTGCAGGAAGAAGAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGA 52125 | | | ||| |||| ||||| | ||| ||||| || ||||| || || |||| ||| | Sbjct 16250 CATCAAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCA 16309 Query 52126 GCGAAGGATTGGCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGT 52185 ||| | || |||| | |||||| ||||||||||| || ||||| || |||| Sbjct 16310 AATCAGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGT 16369 Query 52186 TCCAGGCCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCA 52245 |||||| || | || ||||| ||||| || | || ||||| || || || || | | Sbjct 16370 TCCAGGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAA 16429 Query 52246 CCTTAAAGTCCGACCTGCCCAC-GCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATC 52304 | || |||||| | |||| | ||| || | |||||| |||| |||||| ||||| Sbjct 16430 CTTTGAAGTCC-TCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATT 16488 Query 52305 GGTTTCAGGCTGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGA 52364 ||| | |||||||| || ||||| || || || ||||| || || ||||| || ||| Sbjct 16489 TCTTTTAAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGA 16548 Query 52365 TGCGACAGGTTCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCAT 52424 || | || || || | || ||| |||||| || || || | |||||| ||||| Sbjct 16549 TGTGTAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCAC 16608 Query 52425 TCGACAAAGTAGGC 52438 || ||||| || || Sbjct 16609 TCCACAAAATAAGC 16622 >seq2867 Length=333652 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 127544 CACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCGGGGGAA 127603 || ||||| ||| | || ||||| || |||| | ||||| |||||||||||||||| Sbjct 230986 CATGGGTTCCACATCCATGAGTTTGGAGACAACACAAACGGCTGCACGTCGGCGGGGGCG 230927 Query 127604 CACTTCAATCCCACCGGTA--TGGATCACGGAGCGCCCAACGCGCTCGTTCGTCACGTTG 127661 ||||||||||| |||| | ||| ||||| || || |||| ||| | ||||| | Sbjct 230926 CACTTCAATCC--CCGGCAACAGGAGCACGGCGCCCCTGACGCATCCGTCAGACACGTAG 230869 Query 127662 GCGACCTGGGCAACGTGGAGGC 127683 | || ||||||||| | ||||| Sbjct 230868 GTGATCTGGGCAACATTGAGGC 230847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537331985905640