Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 208 8e-49
seq2867 89.7 6e-13
>seq4146
Length=100757
Score = 208 bits (230), Expect = 8e-49
Identities = 525/794 (66%), Gaps = 17/794 (2%)
Strand=Plus/Plus
Query 51652 CATAGTCGGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGT 51711
|| |||| || ||||| |||| | || |||||| || ||| ||| | || || |
Sbjct 15839 CAAAGTCAGTTGTGTAGGTTTCCTTTGGATTCCATGCAGGTGCGTACAACGGTGTTTGAT 15898
Query 51712 AGCCCAGATCGGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAAT 51771
|| ||| | || |||||||| || || || ||||| |||| | ||| || | ||
Sbjct 15899 GTCCAAGAGTGTCATTTGACCACGCTCCTTTAAAGTCGTAACTCATTAAGAAGATATGAT 15958
Query 51772 CCAACTGCGTCTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGA 51831
||| | ||| || |||||| || ||||| |||||||| | || || || |
Sbjct 15959 CCATATATTGCTGAGCTTTCCTGTAGTCAACTACTTGGATTTTATCCCAACCAGCACTAA 16018
Query 51832 TGGCGCTGGTCAACAGGTACGAACGGTTC------GTGGCGGCGCTCAACTCGTCGAGCA 51885
| ||| |||| || | | ||| || | ||| ||||||| ||||
Sbjct 16019 TAGCGGATGTCA----GTTCATAT--TTCTTACCAGTCTCTGCGGATAACTCGTTCAGCA 16072
Query 51886 TGTCGCGCAGCTCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCA 51945
| || || | ||| ||| |||| ||||| |||| || || || | || |
Sbjct 16073 TTTCACGTAACTCTTTCATAAGCTGGACGTAAACTTCACCGTC---ATTTGGTCCACCGA 16129
Query 51946 GGTCGGGATTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGA 52005
||| ||||| || ||||| || || || |||||||| || | ||| || || |||||||
Sbjct 16130 GGTTAGGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGA 16189
Query 52006 ACTTCCAAGTCAGCAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGT 52065
| |||||||| | || || || || ||| | || || | | ||| | |
Sbjct 16190 ATTTCCAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTTACCTTAT 16249
Query 52066 CGTGCAGGAAGAAGAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGA 52125
| | | ||| |||| ||||| | ||| ||||| || ||||| || || |||| ||| |
Sbjct 16250 CATCAAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCA 16309
Query 52126 GCGAAGGATTGGCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGT 52185
||| | || |||| | |||||| ||||||||||| || ||||| || ||||
Sbjct 16310 AATCAGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGT 16369
Query 52186 TCCAGGCCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCA 52245
|||||| || | || ||||| ||||| || | || ||||| || || || || | |
Sbjct 16370 TCCAGGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAA 16429
Query 52246 CCTTAAAGTCCGACCTGCCCAC-GCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATC 52304
| || |||||| | |||| | ||| || | |||||| |||| |||||| |||||
Sbjct 16430 CTTTGAAGTCC-TCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATT 16488
Query 52305 GGTTTCAGGCTGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGA 52364
||| | |||||||| || ||||| || || || ||||| || || ||||| || |||
Sbjct 16489 TCTTTTAAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGA 16548
Query 52365 TGCGACAGGTTCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCAT 52424
|| | || || || | || ||| |||||| || || || | |||||| |||||
Sbjct 16549 TGTGTAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCAC 16608
Query 52425 TCGACAAAGTAGGC 52438
|| ||||| || ||
Sbjct 16609 TCCACAAAATAAGC 16622
>seq2867
Length=333652
Score = 89.7 bits (98), Expect = 6e-13
Identities = 106/142 (75%), Gaps = 4/142 (3%)
Strand=Plus/Minus
Query 127544 CACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCGGGGGAA 127603
|| ||||| ||| | || ||||| || |||| | ||||| ||||||||||||||||
Sbjct 230986 CATGGGTTCCACATCCATGAGTTTGGAGACAACACAAACGGCTGCACGTCGGCGGGGGCG 230927
Query 127604 CACTTCAATCCCACCGGTA--TGGATCACGGAGCGCCCAACGCGCTCGTTCGTCACGTTG 127661
||||||||||| |||| | ||| ||||| || || |||| ||| | ||||| |
Sbjct 230926 CACTTCAATCC--CCGGCAACAGGAGCACGGCGCCCCTGACGCATCCGTCAGACACGTAG 230869
Query 127662 GCGACCTGGGCAACGTGGAGGC 127683
| || ||||||||| | |||||
Sbjct 230868 GTGATCTGGGCAACATTGAGGC 230847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537331985905640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |