Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq409 183 3e-41
seq9503 136 4e-27
seq2273 134 2e-26
seq3527 132 5e-26
seq10 132 5e-26
>seq409
Length=488447
Score = 183 bits (202), Expect = 3e-41
Identities = 179/228 (79%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412
||||| || |||||||| || ||||| ||||| ||||||||||| || ||||| |||||
Sbjct 76201 GAATCACGAATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATA 76260
Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472
|| |||||||| || ||||| |||| || || || | || || ||||| ||||| | |
Sbjct 76261 GCTATTTGGAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGC 76320
Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532
|| || |||||||||||||| || ||||| ||||| |||||||| || | | || |||
Sbjct 76321 TCCACTAGATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTT 76380
Query 93533 ATAAAATGTTTCTCATCAT-CTTTAAGCTTATCCCAATCGGATAGATC 93579
|| |||||| ||||| || |||||| ||| |||||||| | || |||
Sbjct 76381 ATGAAATGTCTCTCACAATCCTTTAAACTT-TCCCAATCCGGTAAATC 76427
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175
|| |||| |||||| | |||||| ||||| || || || || | ||||| || |||||
Sbjct 75179 TCATCTCTTGATATAAGCTCATTACTGAAAGTCAAGCCAGGCATGAGTCCACGCTTCTTT 75238
Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235
| |||||| || ||||||||||| || || ||||| ||||| || || |||||||||||
Sbjct 75239 AACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAATGCT 75298
Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295
| ||||||||| |||| | || | || || ||||||| || ||||| || ||
Sbjct 75299 ATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCAATCCATTGTAGTGCCCAGTCCGCC 75358
Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342
|| || |||| |||||| | ||||| ||||| ||||||| | ||||
Sbjct 75359 TTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAAGAAATC 75405
Score = 132 bits (146), Expect = 5e-26
Identities = 114/141 (81%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640
||||| | ||| |||||||| ||||||||||| || ||||| |||||||||||||| |||
Sbjct 76505 TTTGATAAATCCACTTCTTCAACAGTCCAAAAGGAAGCTTCGGCTTTTTTGTACATTTCC 76564
Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700
|| || ||| |||| || || || ||||| ||||| | | ||||||||| | ||||
Sbjct 76565 CAAATATCTGGATACTGGATAGGGAATATAACAAATCTACGAGGGTTATCCCTCAGTAGG 76624
Query 93701 GGCTCTAGTTGTGGGTCAAAC 93721
|| |||| |||||||||||||
Sbjct 76625 GGTTCTAATTGTGGGTCAAAC 76645
>seq9503
Length=9945
Score = 136 bits (150), Expect = 4e-27
Identities = 84/89 (94%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 3928 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 3987
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351
|||||||||||||||||||||||||||||
Sbjct 3988 GTGGGTTCGAACCCCACACCTGACAAATT 4016
>seq2273
Length=363948
Score = 134 bits (148), Expect = 2e-26
Identities = 92/103 (89%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 311890 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 311831
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTT 126365
||||||||||||||||||||||||||| | || || | ||||
Sbjct 311830 GTGGGTTCGAACCCCACACCTGACAAAGTTTTTTTTGTTTTTT 311788
Score = 134 bits (148), Expect = 2e-26
Identities = 89/97 (92%), Gaps = 4/97 (4%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 361528 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 361469
Query 126323 GTGGGTTCGAACCCCACACCTGACAA--ATTATTATT 126357
|||||||||||||||||||||||||| |||| ||||
Sbjct 361468 GTGGGTTCGAACCCCACACCTGACAAACATTAGTATT 361432
>seq3527
Length=8536
Score = 132 bits (146), Expect = 5e-26
Identities = 84/90 (93%), Gaps = 2/90 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 3961 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 3902
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTA 126352
||||||||||||||||||||||||||| ||
Sbjct 3901 GTGGGTTCGAACCCCACACCTGACAAACTA 3872
>seq10
Length=344791
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 26911 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 26852
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 26851 GTGGGTTCGAACCCCACACCTGACAAA 26825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556579870687160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |