Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq409 183 3e-41 seq9503 136 4e-27 seq2273 134 2e-26 seq3527 132 5e-26 seq10 132 5e-26 >seq409 Length=488447 Score = 183 bits (202), Expect = 3e-41 Identities = 179/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 ||||| || |||||||| || ||||| ||||| ||||||||||| || ||||| ||||| Sbjct 76201 GAATCACGAATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATA 76260 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 || |||||||| || ||||| |||| || || || | || || ||||| ||||| | | Sbjct 76261 GCTATTTGGAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGC 76320 Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532 || || |||||||||||||| || ||||| ||||| |||||||| || | | || ||| Sbjct 76321 TCCACTAGATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTT 76380 Query 93533 ATAAAATGTTTCTCATCAT-CTTTAAGCTTATCCCAATCGGATAGATC 93579 || |||||| ||||| || |||||| ||| |||||||| | || ||| Sbjct 76381 ATGAAATGTCTCTCACAATCCTTTAAACTT-TCCCAATCCGGTAAATC 76427 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175 || |||| |||||| | |||||| ||||| || || || || | ||||| || ||||| Sbjct 75179 TCATCTCTTGATATAAGCTCATTACTGAAAGTCAAGCCAGGCATGAGTCCACGCTTCTTT 75238 Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235 | |||||| || ||||||||||| || || ||||| ||||| || || ||||||||||| Sbjct 75239 AACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAATGCT 75298 Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295 | ||||||||| |||| | || | || || ||||||| || ||||| || || Sbjct 75299 ATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCAATCCATTGTAGTGCCCAGTCCGCC 75358 Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || || |||| |||||| | ||||| ||||| ||||||| | |||| Sbjct 75359 TTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAAGAAATC 75405 Score = 132 bits (146), Expect = 5e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||| | ||| |||||||| ||||||||||| || ||||| |||||||||||||| ||| Sbjct 76505 TTTGATAAATCCACTTCTTCAACAGTCCAAAAGGAAGCTTCGGCTTTTTTGTACATTTCC 76564 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || || ||| |||| || || || ||||| ||||| | | ||||||||| | |||| Sbjct 76565 CAAATATCTGGATACTGGATAGGGAATATAACAAATCTACGAGGGTTATCCCTCAGTAGG 76624 Query 93701 GGCTCTAGTTGTGGGTCAAAC 93721 || |||| ||||||||||||| Sbjct 76625 GGTTCTAATTGTGGGTCAAAC 76645 >seq9503 Length=9945 Score = 136 bits (150), Expect = 4e-27 Identities = 84/89 (94%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 3928 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 3987 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||||||||||||||||||||||||| Sbjct 3988 GTGGGTTCGAACCCCACACCTGACAAATT 4016 >seq2273 Length=363948 Score = 134 bits (148), Expect = 2e-26 Identities = 92/103 (89%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 311890 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 311831 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTT 126365 ||||||||||||||||||||||||||| | || || | |||| Sbjct 311830 GTGGGTTCGAACCCCACACCTGACAAAGTTTTTTTTGTTTTTT 311788 Score = 134 bits (148), Expect = 2e-26 Identities = 89/97 (92%), Gaps = 4/97 (4%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 361528 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 361469 Query 126323 GTGGGTTCGAACCCCACACCTGACAA--ATTATTATT 126357 |||||||||||||||||||||||||| |||| |||| Sbjct 361468 GTGGGTTCGAACCCCACACCTGACAAACATTAGTATT 361432 >seq3527 Length=8536 Score = 132 bits (146), Expect = 5e-26 Identities = 84/90 (93%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 3961 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 3902 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTA 126352 ||||||||||||||||||||||||||| || Sbjct 3901 GTGGGTTCGAACCCCACACCTGACAAACTA 3872 >seq10 Length=344791 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 26911 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 26852 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 26851 GTGGGTTCGAACCCCACACCTGACAAA 26825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556579870687160