Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq688 129 5e-25
seq2492 84.2 2e-11
>seq688
Length=109112
Score = 129 bits (142), Expect = 5e-25
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 105432 TCCGAGTCTGCACGTTTAAAAACTTTTGAGGATTGGCCACTTAGTTTAAAACAAAGGCCA 105491
||||| |||| ||| | || |||| |||||||| | ||| | ||||| |||
Sbjct 9616 TCCGAAGCTGCCCGTCTCCGTACATTTGTCGATTGGCCTCGCAGTATGCGACAAAAGCCT 9557
Query 105492 GAGCAATTGGCCGAAGCCGGTTTTTACTACACCGGCAAAGGTGATAAAGTCAAATGTTTT 105551
||| | | |||||||| ||||| | |||||| || |||| || ||| ||||| |||
Sbjct 9556 GAGGAGCTAGCCGAAGCTGGTTTCTTCTACACTGGTCAAGGAGACAAAACGAAATGCTTT 9497
Query 105552 TATTGCGACGGCGGCCTTAAGGATTGGGCAAACGCCGACGAACCGTGGGAGGAACATGCA 105611
| || ||||| || | ||||| |||| ||| | ||| || |||||| ||||||||
Sbjct 9496 TTCTGTGACGGTGGTTTGAAGGACTGGGAAAATGACGATATTCCCTGGGAGCAACATGCA 9437
Query 105612 CGTTGGTTTGATCGCTGTTCGTTCGTAAAACTGGTCAAAGGACACGACTACGTGCA 105667
|||||||| ||||| ||| | | ||| |||| |||||||||| || || || ||
Sbjct 9436 CGTTGGTTCGATCGATGTGCCTACGTCCAACTTGTCAAAGGACGAGAGTATGTACA 9381
Score = 105 bits (116), Expect = 6e-18
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 105162 AACGGGTTCTACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGAA 105221
||||| ||||||||| | || || | || ||||||||||| || ||||||||||| |||
Sbjct 9877 AACGGATTCTACTATCTAGGCCGGGGCGATGAAGTGCGCTGTGCTTTCTGCAAAGTCGAA 9818
Query 105222 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACAG 105281
|| ||| | ||| |||| || ||||| || || ||||||||| || | ||||| || ||
Sbjct 9817 ATCATGAGATGGGTGGAAGGGGACGATCCTGCTGTAGATCATCAAAGGTGGGCACCCCAA 9758
Query 105282 TGCCCGTT 105289
|| || ||
Sbjct 9757 TGTCCATT 9750
>seq2492
Length=83244
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| ||||||||||| || |||| |||||||||||||| | ||| || ||
Sbjct 41456 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAGCCATCG 41397
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | || || |||||| |||||||| || | || || ||
Sbjct 41396 GACACTATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAG 41337
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111364
|| ||||| || | ||| ||||| || | |||||| || | ||| | | || || |
Sbjct 41336 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCT--CTGACTACA 41279
Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|||| ||||||||||| ||||| ||||| || || | || | |||||
Sbjct 41278 ATATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41230
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/233 (69%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243
|| ||||| |||||||| || || | ||||||||||| |||||| | || |||||
Sbjct 41915 AACATGCAGATTTTTGTAAAGACCCTCACCGGCAAAACTATTACCCTAGAGGTAGAACCT 41856
Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GA 111302
|| || ||| | ||||| ||||| |||||||| || | |||| | ||
Sbjct 41855 TCAGACACTATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGTAT-CCCGCCAGA 41797
Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGAT 111360
|| || |||||||| | ||| || || || | |||||| || | ||| | | ||
Sbjct 41796 CCAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGCACACTCT--CTGAC 41739
Query 111361 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||| ||||||||||| ||||| ||||| || || | || | |||||
Sbjct 41738 TACAATATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422831917067800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |