Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq4146 226 2e-54 seq3626 102 6e-17 seq2492 86.0 4e-12 >seq4146 Length=100757 Score = 226 bits (250), Expect = 2e-54 Identities = 349/493 (71%), Gaps = 10/493 (2%) Strand=Plus/Plus Query 84237 GGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTC 84296 || || || ||||| || || || || |||||||| ||||| ||||| ||||| |||||| Sbjct 16135 GGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTC 16194 Query 84297 CATACTTGTAAAAACTCCTTAACCGAATTTACAAAAACGTTTCTTTTTTCAACATTGTGC 84356 || ||| | || || || || || |||||| | ||||||| || || | | Sbjct 16195 CAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTT---ACCTTAT-C 16250 Query 84357 ATGAAATAA----AACGGGTCCGACAACGTCCATCCTCCTATGGACGGAAGAATCTTTAG 84412 || ||| || || || || | || ||||| ||||| || || ||||||| ||| | Sbjct 16251 ATCAAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAA 16310 Query 84413 GTGCGGGTTCGCCAATTTAGCTGCCATCAATTGTCCAAAATTGCCTTTATACGGTTCGTT 84472 | || | || ||| | ||||| ||||||||| |||||||| || |||||||| Sbjct 16311 ATCAGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTT 16370 Query 84473 CCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGGATGGCAAT 84532 ||| | ||||| ||||| || || ||||||| || ||||| || || ||||| | || Sbjct 16371 CCAGGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAAC 16430 Query 84533 TTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCGGGTATCAC 84592 ||| || ||| | || || ||||| |||| ||||| || || |||||| || || | Sbjct 16431 TTTGAAGTCCTCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATTTC 16490 Query 84593 TTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTACAACAAG-T 84651 ||| | | ||||| ||||| | |||||| || ||||| || || ||||| || ||| | Sbjct 16491 TTTTAAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTA-AAGAAGAT 16549 Query 84652 GTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACACTCCCCATT 84711 ||| | |||||| | ||| || || ||||| || || || | ||| || ||||| | Sbjct 16550 GTGTAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACT 16609 Query 84712 CAACAAAATACGC 84724 | |||||||| || Sbjct 16610 CCACAAAATAAGC 16622 >seq3626 Length=201135 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 |||||||| ||||| | || ||| | || || |||||||| ||| |||| || | Sbjct 59062 AAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCCA 59121 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || || | | || | || |||||| || ||||| ||| | ||| | Sbjct 59122 TCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGAT 59181 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||| |||||||||| || || ||||| || |||||| || | | |||||| Sbjct 59182 CAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATTAC 59241 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||| ||||||||||| ||||| |||||||||| |||||||| ||| Sbjct 59242 AACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGA 59292 Score = 93.3 bits (102), Expect = 3e-14 Identities = 97/126 (77%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| |||||||||||||||| || ||||| |||||| ||| | | || | Sbjct 60092 ACCAACAGCGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTTTCTGACT 60151 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA- 22067 | || ||||| |||||||| ||| | || ||||||||||| | ||||| || ||||| Sbjct 60152 ATAACATTCAAAAGGAATCCACTTTGCACTTGGTATTACGTCTCCGAGGTGGCAATTAAG 60211 Query 22068 TAATAA 22073 |||||| Sbjct 60212 TAATAA 60217 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| |||| || | || || || |||||||| ||||| ||| | || Sbjct 59521 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAACCTTCA 59580 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || ||||| || || || || | ||| | ||||| Sbjct 59581 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 59640 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| |||| ||||||||||| |||||| | |||||| ||| || | || ||||| Sbjct 59641 CAGCGACTCATCTTTGCTGGAAAACAATTGGAAGATGGGCGAACCCTGTCTGACTACAAC 59700 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || || || |||||||| | ||| | ||| | ||||| || Sbjct 59701 ATTCAAAAAGAGTCCACTCTTCACCTTGTACTGCGTCTGCGAGGTGG 59747 >seq2492 Length=83244 Score = 86.0 bits (94), Expect = 4e-12 Identities = 163/238 (68%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || ||||| ||||||||||| || | ||| || | || Sbjct 40316 ATGCAAATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCA 40257 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || ||||| ||||| || ||||||||| | || | |||| Sbjct 40256 GACACCATAGAAAATGTTAAGGCTAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 40197 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT--TTAAAAACTATGGCCGATTACA 22011 ||||| || |||||||| ||||| || || |||||| | ||||| | || |||| Sbjct 40196 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTAT--CGGACTACA 40139 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAATA 22069 |||| || || ||||| ||||| ||| | ||| | | || | || || ||||||| Sbjct 40138 ATATCCAAAAAGAATCCACTCTCCATTTAGTACTGAGATTGAGGGGTGGCAATTAATA 40081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || || || |||||||||||||| | ||| || | | Sbjct 41456 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAGCCATCG 41397 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || ||||| |||||| || ||||||||| | || | |||| Sbjct 41396 GACACTATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAG 41337 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT--TTAAAAACTATGGCCGATTACA 22011 ||||| || |||||||| ||||| || || |||||| | | ||| | | || |||| Sbjct 41336 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCT--CTGACTACA 41279 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 |||| || || ||||| || || ||| ||||| Sbjct 41278 ATATCCAAAAAGAATCCACACTCCATTTGGTA 41247 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || || | || || ||||| ||||||||||| || | ||| || | | Sbjct 41685 AATGCAGATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATC 41626 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || |||| |||||| || ||||||||| | || | |||| Sbjct 41625 AGACACCATTGAAAATGTTAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCA 41566 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || |||||||| ||||| || || |||||| || | | || ||||| Sbjct 41565 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAA 41506 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTA 22043 ||| ||||| ||||| || || ||| ||||| Sbjct 41505 TATCCAGAAAGAATCCACACTCCATTTGGTA 41475 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 || ||||| || ||| | || || | || |||||||| |||||| | || ||| | Sbjct 41915 AACATGCAGATTTTTGTAAAGACCCTCACCGGCAAAACTATTACCCTAGAGGTAGAACCT 41856 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 |||| || | | || | ||| ||||| || ||||||||| | || | || Sbjct 41855 TCAGACACTATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGTATCCCGCCAGAC 41796 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT--TTAAAAACTATGGCCGATT 22008 || ||||| |||||||||||||| || || || |||||| | | ||| | | || | Sbjct 41795 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGCACACTCT--CTGACT 41738 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||| || || ||||| || || ||| ||||| | | || |||| ||| Sbjct 41737 ACAATATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGGA 41685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357948647252086