Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008874.1 Length=2509 Score E Sequences producing significant alignments: (Bits) Value seq8078 86.0 1e-13 >seq8078 Length=15557 Score = 86.0 bits (94), Expect = 1e-13 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1065 GAGAGAAATGCCAAGTAAATATTCCTATGTAGTATAGTAATGGTGACATTACTATATAGT 1124 |||||||||| ||||| ||||| ||||| ||||||||||||| |||||||| | |||| Sbjct 12207 GAGAGAAATGTCAAGTTAATATGCCTATCCGGTATAGTAATGGTTACATTACTCTGTAGT 12148 Query 1125 TTGTATAAGCGGTCA 1139 ||||||| || |||| Sbjct 12147 TTGTATATGCAGTCA 12133 Score = 84.2 bits (92), Expect = 3e-13 Identities = 77/97 (79%), Gaps = 4/97 (4%) Strand=Plus/Minus Query 126 GAGAGAAATTTTAAGTAAATATTCCTATGCAGCATAGTAATGGTTACATTACTCCATAGT 185 ||||||||| | |||| ||||| ||||| | | ||||||||||||||||||||| |||| Sbjct 12207 GAGAGAAATGTCAAGTTAATATGCCTATCCGGTATAGTAATGGTTACATTACTCTGTAGT 12148 Query 186 TTGTATAAGCGG----TTACATGCGGCGTCAAACAAA 218 ||||||| || | ||| | | ||||| | ||||| Sbjct 12147 TTGTATATGCAGTCATTTATAAGTGGCGTGACACAAA 12111 Score = 77.0 bits (84), Expect = 5e-11 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 1412 GCTTATACAAACTGTAGAGTAATGTCACCATTACTATGCTGCATAGGAATAATTACTTGA 1471 || |||||||||| |||||||||| ||||||||||| | | ||||| ||| | |||||| Sbjct 12138 GCATATACAAACTACAGAGTAATGTAACCATTACTATACCGGATAGGCATATTAACTTGA 12197 Query 1472 AATTTCTCTC 1481 ||||||||| Sbjct 12198 CATTTCTCTC 12207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916603790150