Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_008874.1
Length=2509
Score E
Sequences producing significant alignments: (Bits) Value
seq8078 86.0 1e-13
>seq8078
Length=15557
Score = 86.0 bits (94), Expect = 1e-13
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 1065 GAGAGAAATGCCAAGTAAATATTCCTATGTAGTATAGTAATGGTGACATTACTATATAGT 1124
|||||||||| ||||| ||||| ||||| ||||||||||||| |||||||| | ||||
Sbjct 12207 GAGAGAAATGTCAAGTTAATATGCCTATCCGGTATAGTAATGGTTACATTACTCTGTAGT 12148
Query 1125 TTGTATAAGCGGTCA 1139
||||||| || ||||
Sbjct 12147 TTGTATATGCAGTCA 12133
Score = 84.2 bits (92), Expect = 3e-13
Identities = 77/97 (79%), Gaps = 4/97 (4%)
Strand=Plus/Minus
Query 126 GAGAGAAATTTTAAGTAAATATTCCTATGCAGCATAGTAATGGTTACATTACTCCATAGT 185
||||||||| | |||| ||||| ||||| | | ||||||||||||||||||||| ||||
Sbjct 12207 GAGAGAAATGTCAAGTTAATATGCCTATCCGGTATAGTAATGGTTACATTACTCTGTAGT 12148
Query 186 TTGTATAAGCGG----TTACATGCGGCGTCAAACAAA 218
||||||| || | ||| | | ||||| | |||||
Sbjct 12147 TTGTATATGCAGTCATTTATAAGTGGCGTGACACAAA 12111
Score = 77.0 bits (84), Expect = 5e-11
Identities = 59/70 (84%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 1412 GCTTATACAAACTGTAGAGTAATGTCACCATTACTATGCTGCATAGGAATAATTACTTGA 1471
|| |||||||||| |||||||||| ||||||||||| | | ||||| ||| | ||||||
Sbjct 12138 GCATATACAAACTACAGAGTAATGTAACCATTACTATACCGGATAGGCATATTAACTTGA 12197
Query 1472 AATTTCTCTC 1481
|||||||||
Sbjct 12198 CATTTCTCTC 12207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916603790150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |