Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_008952.1
Length=4063
Score E
Sequences producing significant alignments: (Bits) Value
seq309 154 4e-34
seq423 111 4e-21
>seq309
Length=88796
Score = 154 bits (170), Expect = 4e-34
Identities = 122/143 (85%), Gaps = 4/143 (3%)
Strand=Plus/Plus
Query 999 CTTTTAGATTG--CATTCTAAAAA-GTTGAACAAT-TCGTTGCTAATTCAACTTTTCGTA 1054
||||||| || ||||||||||| |||||||| | |||||| || |||||||||||||
Sbjct 66345 CTTTTAGGCTGTACATTCTAAAAAAGTTGAACAGTCTCGTTGAGAACTCAACTTTTCGTA 66404
Query 1055 CGTTGCGACGTGTTCTCTGATCGGCTCGAGGCGCTGGTGATAAGCCTGAGTAGAATACAT 1114
||||||||| |||||||||| ||| ||| |||| ||||| ||||||||| |||||||
Sbjct 66405 TGTTGCGACGCGTTCTCTGATGGGCCCGAATGGCTGTTGATACGCCTGAGTAAAATACAT 66464
Query 1115 GGTTTTTTCTTCAAAGATAGCAC 1137
| |||||||||||||||||||||
Sbjct 66465 GTTTTTTTCTTCAAAGATAGCAC 66487
Score = 154 bits (170), Expect = 4e-34
Identities = 191/262 (73%), Gaps = 21/262 (8%)
Strand=Plus/Plus
Query 1131 ATAGCACC-GTCGCTGCATCTCGCTCTATTGTGTGACCGCGAGCTCCATGCGGCGTTGGA 1189
||||||| ||||| ||| |||| || ||| || |||| || ||| |||| |||
Sbjct 66765 ATAGCACAAGTCGCCGCACCTCGATCCGTTGAGTTACCGAGACCTCGATGCAAACGCGGA 66824
Query 1190 GAGTCACGTGCGTCGCTGTCTCATCGGTAGCTCGATGGTGCGGCCGAGATACGGAGCACC 1249
|||||||| | || |||| | | ||| ||||||||||||| | | ||||||||||
Sbjct 66825 TAGTCACGTACAGAGCGGTCTTAGCTGTAACTCGATGGTGCGGTCAAAGCACGGAGCACC 66884
Query 1250 TGGTTGTCGTGGACGTTAATC---TTGTACGGAGTTGGAAAAAGTTAGCATGTC-AAGAG 1305
|||||| ||| | ||||||| |||||||||||| ||||||||||||||||| || |
Sbjct 66885 TGGTTGGAGTGCAAGTTAATCTGTTTGTACGGAGTTTGAAAAAGTTAGCATGTCAAAAAC 66944
Query 1306 GTATGCACTTTGTACGCTTCGAGCATTGACAACATTGGGTACAAACTCTACTCCAGTTTG 1365
|| |||||| |||| ||| | ||||||||||||||||||||||
Sbjct 66945 GTCTGCACT----------------TTGATCACAGTAGGTACAAACTCTACTCCAGTTTC 66988
Query 1366 TAAACAAACCGCATTACAACAT 1387
|||||||| | || |||| ||
Sbjct 66989 GAAACAAACAGAATAACAAAAT 67010
Score = 116 bits (128), Expect = 1e-22
Identities = 119/151 (79%), Gaps = 6/151 (4%)
Strand=Plus/Plus
Query 154 ATGCATTTGACTCAAAGTGCAGTTGAATTTTTTCACCGCAAACGGT-GCTCGCTAGCCTC 212
||||||||| |||| | |||||||| |||||||||||| ||||| | | |||||||| |
Sbjct 65773 ATGCATTTGTCTCAGAATGCAGTTGCATTTTTTCACCGAAAACGATGGTTCGCTAGCTTT 65832
Query 213 CGGGTACGCTTGTAGATGAAGTCTAGGCATAAATCTCTGCAATAGATTCTCAGGTGTTGC 272
| | ||| || | || | ||||| ||| ||| ||||| | ||| || ||||||||||
Sbjct 65833 CTGTCACG-TTCTGTATAAGGTCTAAGCACAAACCTCTGTA--AGACTCGCAGGTGTTGC 65889
Query 273 ATAGAAAGGTAAGAAGATAAACGGCGCAGAG 303
|||||||||| |||||||||| ||||||
Sbjct 65890 --AGAAAGGTAACAAGATAAACGCTGCAGAG 65918
>seq423
Length=337546
Score = 111 bits (122), Expect = 4e-21
Identities = 88/106 (83%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 1288 AAGTTAGCATGTCAAGAGGTATGCACTTTGTACGCTTCGAGCATTGACAACATTGGGTAC 1347
||||||||||||||| | ||||||||||||||| ||||| |||||| ||||| | ||
Sbjct 143118 AAGTTAGCATGTCAAAACGTATGCACTTTGTACTGATCGAGTATTGACCACATTAGAGAC 143177
Query 1348 AAACTCTACTCCAGTTTGTAAACAAACCGCATTACAACATCTATTT 1393
||||||||||||||||| |||||||| || | ||| | | |||||
Sbjct 143178 AAACTCTACTCCAGTTTAAAAACAAACAGCGTGACATCTTATATTT 143223
Score = 98.7 bits (108), Expect = 3e-17
Identities = 92/116 (79%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 2327 TTTTACTCTGTAAACCGTGCGGTTTATAATATTTCTTATTGTAATGCTTCTTTTTCTTCA 2386
||||| ||||| | ||||||| | || ||| || ||| || | ||||||| |||| || |
Sbjct 143790 TTTTAATCTGTTAGCCGTGCGATGTACAATTTTGCTTCTTATTATGCTTCATTTTTTTTA 143849
Query 2387 CTATTTTAAATAAATATTATTATAAAATATTTCTTGGTATCATTGACGTAGAATAA 2442
|| |||||| ||| | |||| ||| ||||||||||||||||||| ||||||||
Sbjct 143850 CTTTTTTAA-TAAGAAATATTGAGAAACATTTCTTGGTATCATTGACATAGAATAA 143904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12883910188180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |