Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_008973.1 Length=4180 Score E Sequences producing significant alignments: (Bits) Value seq3131 89.7 1e-14 >seq3131 Length=67482 Score = 89.7 bits (98), Expect = 1e-14 Identities = 181/265 (68%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 1198 CAGAAATCTACAGCTCACGTTTTCACGGAATGACACTTAGAACGCCTAGAACAAACAGAC 1257 ||||| || |||| || || ||| |||| | || | ||||| ||||||||||||| || Sbjct 13716 CAGAAGCCTTCAGCACAATTTCTCAAGGAACGGCAGTAAGAACACCTAGAACAAACATAC 13657 Query 1258 TTCTTGTAGAATTATCTGCTTATCGTTGGCATGCAGCAGTCACCTGCATCTCGTAGGCCA 1317 || || | | |||||||| ||| ||||||| || | ||||| | || | ||| | | Sbjct 13656 ACCTCGTTGTACTATCTGCT--TCGATGGCATGGAGTAATCACCCGTATTTTGTACGTTA 13599 Query 1318 TACAGCGCTTCACCACTTTTGCATAATGTAAGCATGACGTTGGACTGCAGCGGAGCATTC 1377 || | | ||| || |||||||| |||| || || ||||||||| || | Sbjct 13598 TATATTAACTGGCCATTTGTGCATAATACAAGCGTGCCGCAAAACTGCAGCGCTGCGTGT 13539 Query 1378 ACAACAGGCACTCACAAGACCCACTACTCCTAGATTTGAAGTTATTTTTACAACAGAGGT 1437 | ||| |||||| ||| || | || || | |||| ||||| ||| | || || Sbjct 13538 ATTGCAGCCACTCATGAGATCCGCAACAGCTGAAATTGATGTTATATTT-TATGAGGTGT 13480 Query 1438 ACTAA-AGCGTGATGATACCTATAA 1461 ||||| || ||| || |||| ||| Sbjct 13479 ACTAACAGTGTGTAGACACCTCTAA 13455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13258144918075