Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq1798 102 6e-17
seq3626 84.2 2e-11
>seq1798
Length=508928
Score = 102 bits (112), Expect = 6e-17
Identities = 61/64 (95%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 115563 AGTAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGTGGTATCGTC 115622
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 74487 AGAAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCC 74428
Query 115623 TTAA 115626
||||
Sbjct 74427 TTAA 74424
Score = 102 bits (112), Expect = 6e-17
Identities = 61/64 (95%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 114366 AGTAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGTGGTATCGTC 114425
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 74487 AGAAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCC 74428
Query 114426 TTAA 114429
||||
Sbjct 74427 TTAA 74424
>seq3626
Length=201135
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| |||| ||| ||||| || || ||||| ||| ||| || ||||||||||| || |
Sbjct 59748 ACCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGA 59689
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| |||| | || |||||||| || || ||||| || || ||||| || || ||
Sbjct 59688 CAGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGG 59629
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTC 34076
| || || |||||| | |||| |||| || | || || | || | || |||
Sbjct 59628 GATGCCTTCCTTGTCC-TGGATTTTGGCTT--TGACATTCTCAATTGTGTCTGAAGGTTC 59572
Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| | || || || ||||| || || || || |||||||| |||||
Sbjct 59571 AACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396867094807918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |