Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1798 102 6e-17 seq3626 84.2 2e-11 >seq1798 Length=508928 Score = 102 bits (112), Expect = 6e-17 Identities = 61/64 (95%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 115563 AGTAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGTGGTATCGTC 115622 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 74487 AGAAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCC 74428 Query 115623 TTAA 115626 |||| Sbjct 74427 TTAA 74424 Score = 102 bits (112), Expect = 6e-17 Identities = 61/64 (95%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 114366 AGTAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGTGGTATCGTC 114425 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 74487 AGAAACTGAGTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCC 74428 Query 114426 TTAA 114429 |||| Sbjct 74427 TTAA 74424 >seq3626 Length=201135 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| ||| ||||| || || ||||| ||| ||| || ||||||||||| || | Sbjct 59748 ACCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGA 59689 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || |||| | || |||||||| || || ||||| || || ||||| || || || Sbjct 59688 CAGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGG 59629 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTC 34076 | || || |||||| | |||| |||| || | || || | || | || ||| Sbjct 59628 GATGCCTTCCTTGTCC-TGGATTTTGGCTT--TGACATTCTCAATTGTGTCTGAAGGTTC 59572 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || ||||| || || || || |||||||| ||||| Sbjct 59571 AACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396867094807918