Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq3626 132 1e-25
seq4182 131 4e-25
seq2492 131 4e-25
>seq3626
Length=201135
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||||| || |||| ||| |||||||| || || ||||| |
Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
|| || || || ||||| ||||||||||| || ||||| || |||||||| |||||
Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGG---TCTGGA 59631
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| ||||| || ||||||||||| ||||| || || || || | || | |||
Sbjct 59630 GGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 59571
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || ||||| || || |||||||| || || ||||||||
Sbjct 59570 ACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
Score = 127 bits (140), Expect = 5e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| ||| |||||||| || || ||||| |
Sbjct 59519 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAA 59460
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||||||||| | |||||||| || || || || || || || |||
Sbjct 59459 AGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGG 59400
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| |||||||| || ||||||||||| || |||||||| |||| ||| | ||||||
Sbjct 59399 ATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACT 59340
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| | || |||||||| || || ||||| || || || || ||||||
Sbjct 59339 TCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCATT 59292
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| ||| |||||||| || || ||||| |
Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
|| || || || ||||| | ||||||||| || ||||| || |||||||| |||||
Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGG---TCTGGA 59859
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| ||||| || ||||||||||| ||||| || || || || | || | |||
Sbjct 59858 GGGATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 59799
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || ||||| || || ||||||||||| || ||||||||
Sbjct 59798 ACTTCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | | ||| | || | ||| ||| ||||| || |||||||| |
Sbjct 60203 CCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAA 60144
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
|| || || || ||||| | ||| ||||| || ||||| || |||||||| |||||
Sbjct 60143 AGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGG---TCTGGA 60087
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| ||||| || ||||||||||| ||||| || || || || | || | |||
Sbjct 60086 GGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 60027
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || ||||| || || ||||||||||| || ||||||||
Sbjct 60026 ACTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977
Score = 122 bits (134), Expect = 2e-22
Identities = 152/207 (73%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330
|||| ||| ||| ||||| || || || || | ||| ||||| || ||||| | |||
Sbjct 59267 TGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAGAGTGTGCGCCCATCTTCAAGCTGT 59208
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| ||||||||||| || ||||| ||| ||||| |||||||| ||||| |||||
Sbjct 59207 TTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGGATACCTTCTTTGTCCTGAATTTTA 59148
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCG 288447
||||| || ||||| || | ||| |||| || || || | || || || || ||
Sbjct 59147 GCTTTTACATTTTCAATTGTATC---CGATGGCTCAACCTCCAAGGTTATGGTTTTTCCA 59091
Query 288448 GTCAGAGTCTTGACGAATATCTGCATT 288474
|| || ||||| |||||||||||||||
Sbjct 59090 GTGAGTGTCTTCACGAATATCTGCATT 59064
>seq4182
Length=188933
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
|| ||||| | ||| || || || ||||| ||||||| | ||||| || |||||
Sbjct 74290 ACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGATAATGTGCGGCCATCTTCC 74349
Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384
| ||||| || || ||||||| ||| || ||| ||| || ||||||||||| ||
Sbjct 74350 AGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGAATACCTTCTTTATCTTGA 74409
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444
||||| ||||| || ||||| |||| |||| | || || ||||| ||||| || |||
Sbjct 74410 ATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCACCTCGAGGGTGATGGTTTTC 74469
Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || || || |||||||||||||||
Sbjct 74470 CCCGTAAGGGTTTTTACGAATATCTGCATT 74499
>seq2492
Length=83244
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | ||| ||||||||||||||| ||||| | |
Sbjct 40546 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40605
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | || || || || ||||| || | ||| || ||||
Sbjct 40606 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40665
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || ||||| || |||||||| || || || ||||| |||| || | || |||
Sbjct 40666 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAACT 40725
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || |||| ||||||||||| ||||||||
Sbjct 40726 TCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | ||| ||||||||||||||| ||||| | |
Sbjct 41002 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAG 41061
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | || || || || ||||| || | ||| || ||||
Sbjct 41062 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41121
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || ||||| || |||||||| || || || ||||| |||| || | || |||
Sbjct 41122 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACT 41181
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || |||| ||||||||||| ||||||||
Sbjct 41182 TCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | ||| ||||||||||||||| ||||| | |
Sbjct 40774 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40833
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | || ||||| || ||||| || | ||| || ||||
Sbjct 40834 AGTGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40893
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT---TCT 288423
|| || ||||| || |||||||| || || || ||||| |||| || |||| ||
Sbjct 40894 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTC---CGATGGCTCA 40950
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || ||||| || || || || | ||||| ||||| ||||||||
Sbjct 40951 ACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000
Score = 125 bits (138), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | | ||| ||||| | ||| | ||| ||||||||||||||| ||||| |
Sbjct 41685 TCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGA 41744
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363
||| ||||| || ||||| | || || || || ||||| || | ||| || |||
Sbjct 41745 GAGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTG---GTCTGG 41801
Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
||||| || ||||| || |||||||| || || || ||||| |||| || | |||
Sbjct 41802 CGGGATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTC 41861
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| || || || || || || ||||| || ||||| || || ||||||||
Sbjct 41862 TACCTCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCAT 41912
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | ||| |||||| |||||||| ||||| | |
Sbjct 41458 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAG 41517
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | || || || || ||||| || | ||| || ||||
Sbjct 41518 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41577
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || ||||| || || ||||| ||||| || ||||| || | || | || |||
Sbjct 41578 ATACCCTCTTTGTCTTGAATTTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACT 41637
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || ||||| || || || || | ||||||||||| |||||||||
Sbjct 41638 TCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATCTGCATT 41685
Score = 116 bits (128), Expect = 9e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | ||| ||||||||||||||| ||||| |
Sbjct 40090 CCACCCCTCAATCTCAGTACTAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTCCGAT 40149
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | || || || || ||||| || | ||| || ||||
Sbjct 40150 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40209
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || ||||| || |||||||| || || || |||||||| | || | || |||
Sbjct 40210 ATACCCTCTTTGTCTTGGATTTTAGCCTTAACATTTTCTATGGTGTCTGATGGCTCAACT 40269
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | ||||||||||| || |||||
Sbjct 40270 TCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATTTGCAT 40316
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | | ||| ||||| | ||| | ||| ||||||||||||||| ||||| | |
Sbjct 41230 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAG 41289
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | || || || || ||||| || | ||| || ||||
Sbjct 41290 AGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41349
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT---TCT 288423
|| || ||||| || || ||||| || || || ||||| |||| || |||| ||
Sbjct 41350 ATACCCTCTTTGTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTC---CGATGGCTCA 41406
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || || || || || |||| |||||||| || ||||||||
Sbjct 41407 ACTTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179044401078402
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