Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4146 152 5e-32 seq4459 120 3e-22 seq4182 116 4e-21 seq3626 113 4e-20 seq2867 93.3 4e-14 seq2492 89.7 5e-13 >seq4146 Length=100757 Score = 152 bits (168), Expect = 5e-32 Identities = 396/598 (66%), Gaps = 22/598 (4%) Strand=Plus/Minus Query 27908 ATCGTCGCCGACACCGACGGTTCTCATCTCGCGCCGCTAGTATACGATTTCCTCGAAAAC 27967 ||||| || || || || ||| ||||| | || |||| | ||| || || || Sbjct 16721 ATCGTAGCAGATACTGATGGTAGCCATCTACCACCTCTAGACTTTAGTTTTCTAGAGAAA 16662 Query 27968 AACAAGCGCTTTGATAAACA---TCCCGAGAAAATTGTGGCCGCCTATTTCGTCGAGTGG 28024 ||||||| |||| |||||| | | | |||| | || | || ||||| || |||||| Sbjct 16661 AACAAGC-CTTT--TAAACAAACTTCAGGGAAAGTCGTCGGAGCTTATTTTGTGGAGTGG 16605 Query 28025 GGCGTGTATCTGCGGCAGTTTCCCGTCGACAAAGTGCCCGCGCCCAACCTGTCGCACTTG 28084 || || || | | | || || || || || || ||| || || || | || | Sbjct 16604 GGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGTACCCATTCCAAATCTTACACATCTT 16545 Query 28085 CTGTACGGTTTCGTGCCGATATGCGGCGGCGACGGCATAAACGACGCCCTCAAGACCGTT 28144 || ||||| || | || || || ||||| ||||| || |||||| | || | Sbjct 16544 CTTTACGGATTTATCCCCATCTGTGGCGGTGACGGAATTAACGACAGTTTAAAAGAAATC 16485 Query 28145 CCCGGCAGTTTCGAGGCGCTGCAGCGCTCGTGCGCCGGGCGCGCCGACTTCAAGGTGACG 28204 || |||||| | || |||| | || ||| |||||| | |||||||| || | Sbjct 16484 GAAGGAAGTTTCCAAGCTTTGCAAAGATCTTGCAGCGGGCGAGAGGACTTCAAAGTTTCT 16425 Query 28205 ATCCACGATCCCTGGGCCGCCATTCAGAAGCCGCAAAAGGGCGTCTCTACGTGGAACGAG 28264 ||||| || || ||||| || | || || || || ||||| | || | |||||||| Sbjct 16424 ATCCATGACCCTTGGGCAGCTTTACAAAAACCACAGAAGGGTTTGTCCTCCTGGAACGAA 16365 Query 28265 CCGTACAAAGGCAACTTTGGGCAATTGATGAGCGTCAAATTAGCCAATCCGCACTTGAAG 28324 || ||||||||||||||||| ||| ||||| | ||| ||| | || | |||||| Sbjct 16364 CCTTACAAAGGCAACTTTGGACAACTGATGTCTTTGAAACAAGCTAGACCTGATTTGAAG 16305 Query 28325 GTGCTGGCGTCGATCGGCGGCTGGACGCTGTCGGACCCATTCTTTCACATGCACGACGCG 28384 || || | || ||||| |||||||| ||| | || ||||||| || | || | Sbjct 16304 GTTCTTCCATCAATCGGAGGCTGGACACTGGCAGATCCATTCT---ACTTTTTTGATGAT 16248 Query 28385 ACCGTGCGCCAAACGTTCATCGATT----CCGTC-GTG---GACTTTCTGCTGACCTGGA 28436 | || ||| |||| || | || ||| ||||| || | || |||| Sbjct 16247 AAGGT-----AAAAAGAGATCGTTTTGTGGCATCAGTGAAAGACTTCCTCCAAACTTGGA 16193 Query 28437 AGTTCTTCGACGGCGTCGACATCGATTGGGAGTTTCCGGGCGGCAAAGGAGCCAATCC 28494 | |||||||| || || ||||| ||||||||||| || || || ||||| || ||||| Sbjct 16192 AATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGGAAAAGGTGCTAATCC 16135 >seq4459 Length=154925 Score = 120 bits (132), Expect = 3e-22 Identities = 284/428 (66%), Gaps = 6/428 (1%) Strand=Plus/Minus Query 153027 TGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAA 153086 || || || |||||||| ||||| | || |||||||| |||| ||| |||||| Sbjct 143664 TGATTAACGACTTGAAATTCGCCTGATAATACTCGTCTTTGGTATATATTTGAAGTGAAT 143605 Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 |||||||||||||| |||||||| ||||| |||||||| | ||| || ||||| |||| Sbjct 143604 GGTTCAAAGGATTCATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATAGGCGCC 143545 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTG---CGCTCGAATGTCGTCCTTCAACGCCTGCCAA 153203 | | || |||||| || | || || ||| || | || || | || |||| Sbjct 143544 AGTAGCAGAGAATTACGAATTCCATGTTTAGCT---ATTTTTTCTTTAAGAGCAACCCAA 143488 Query 153204 TCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCG 153263 ||||| || | | || ||| |||||||| || | || || | ||| | || | Sbjct 143487 TCCCAGAGATCAGTGGGAGTCTTATTCCACATATCAAATTGCAAAATCCCTTGGCTAACA 143428 Query 153264 GGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCG 153323 ||||| || || | | ||| || || || | || | ||| |||||||| || Sbjct 143427 GGACTACCTTCATATGAACTATAAACTCCCTCTTTCTCTGCTAATTCACAGCTAGCTTCC 143368 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTC 153383 | || || || || || || || || |||| || | | |||| ||| || Sbjct 143367 AAAGCTCCGTAATAGATAGTCTCAAATATCTGTTGGTTTAACAACAATGCTTTTTCACTT 143308 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 || || || ||||| |||||||||||| || || | ||| |||| || | || || Sbjct 143307 TCATAAGGGTAGCGCATCAGCACAAAGGCATCAGCTAAACCTTGGACTCCAATACCTATT 143248 Query 153444 GGTCGATG 153451 |||| ||| Sbjct 143247 GGTCTATG 143240 >seq4182 Length=188933 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || | ||||| | |||||||| ||||| ||||||||| Sbjct 74272 CCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGAT 74331 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||| | | |||| | ||| || || ||||| || Sbjct 74332 AATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGA 74391 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| |||| | ||||| | ||| | || |||| | |||||| Sbjct 74392 ATACCTTCTTTATC-TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCAC 74450 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | ||||| || || || |||||||| || |||||||| Sbjct 74451 CTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCAT 74498 >seq3626 Length=201135 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||| | ||| | || | | ||||| ||||||||||||||||| Sbjct 59519 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAA 59460 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| || || ||||| || | | | || || || || ||||||||||| Sbjct 59459 AGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGG 59400 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| |||| | ||| | || || | | ||| || Sbjct 59399 ATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACT 59340 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| ||||| || |||||||| |||||||| ||||| Sbjct 59339 TCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCAT 59293 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||| | ||| | || | | ||||| ||||||||||||||||| | Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || |||||||| || | | |||| || ||||||||||| ||||| Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| |||||| ||| | | || | ||||| | | || || Sbjct 59855 ATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59796 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| ||||| || ||||| |||||||| Sbjct 59795 TCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||||| || | || | | ||||| ||||||||||||||||| | Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || | |||||| || | | |||| || ||||||||||| ||||| Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| |||||| ||| | | || | ||||| | | || || Sbjct 59627 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59568 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| ||||| || ||||| |||||||| Sbjct 59567 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| || || || || || || | | || ||||||||||||||||| || Sbjct 59291 CCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAG 59232 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || || ||||| || | |||| || ||||| || || ||||| Sbjct 59231 AGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGG 59172 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| |||| | ||||| | ||| | || || | | ||| || Sbjct 59171 ATACCTTCTTTGTC-CTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTCAAC 59113 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||| ||||| || || || || || |||||||| Sbjct 59112 CTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCAT 59065 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||| || || || || | | || |||||||||||||| ||||| Sbjct 60204 GCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGA 60145 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || ||| || || ||||| || || | | |||| || ||||||||||| ||||| Sbjct 60144 AAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGG 60085 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| |||||| ||| | | || | ||||| | | || || Sbjct 60084 GATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAAC 60025 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| ||||| || ||||| |||||||| Sbjct 60024 TTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977 >seq2867 Length=333652 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 57301 GCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC- 57359 ||||| | |||||||| || || ||||| | |||| |||| || |||||||| || Sbjct 230847 GCCTCAATGTTGCCCAGATCACCTACGTGTCTGACGGATGCGTCAGGGGCGCCGTGCTCC 230906 Query 57360 -GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGA 57418 | |||||| || || |||||| | |||||||||||||||||||| || |||| || | Sbjct 230907 TGTTGCCGG--GGATTGAAGTGCGCCCCCGCCGACGTGCAGCCGTTTGTGTTGTCTCCAA 230964 Query 57419 ACTCGTGAACGTGAAATCCGTG 57440 |||| || | ||| || || || Sbjct 230965 ACTCATGGATGTGGAACCCATG 230986 >seq2492 Length=83244 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || || ||||| | | || || ||||| || |||||||| Sbjct 41230 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAG 41289 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || || || |||| | |||| || | ||| ||||| || || Sbjct 41290 AGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41349 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| |||| | |||| | ||| | ||||| | | ||| || Sbjct 41350 ATACCCTCTTTGTCT-TGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAAC 41408 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||||| || || |||||||||||||| Sbjct 41409 TTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || || ||||| | | || || ||||| || |||||||| Sbjct 41686 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAG-- 41743 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| |||| || || || || ||||| | | |||| || | ||| ||||| || | Sbjct 41744 AGAGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCG 41803 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | ||||| |||||||| |||||| |||| | ||| | ||||| | | || | Sbjct 41804 GGATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTA 41863 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||||| || || || || |||||||||||||||||| Sbjct 41864 CCTCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATG 41913 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || || ||||| | | || || ||||| || |||||||| | Sbjct 41002 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTC--TG 41059 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| |||| || || || || || |||| | |||| || | ||| ||||| || | Sbjct 41060 AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 41119 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | ||||| |||||||| |||||| || | | ||| | ||||| | | ||| | Sbjct 41120 GGATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAA 41179 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| ||||||| || || || ||||||||||| Sbjct 41180 CTTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496012041822480