Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4459 89.7 6e-13 >seq4459 Length=154925 Score = 89.7 bits (98), Expect = 6e-13 Identities = 246/372 (66%), Gaps = 9/372 (2%) Strand=Plus/Minus Query 116246 CATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAG 116305 |||| || | ||||||||| || | || ||||| | ||||| |||||| || ||| || Sbjct 143279 CATCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTCGCATATTGGAGTTTTTAG 143220 Query 116306 CGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 116364 | ||| | | |||||| |||| ||| |||| |||| || |||| || | | Sbjct 143219 CT-TCTGGAACTGGATAATAATTGACATCTATAATTTTATTAAGGTTTTGTGTTATGATT 143161 Query 116365 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 116424 ||||| | ||| | | |||| | ||| | | | | || ||||| ||| || || Sbjct 143160 TTTGTAACTTCTTTTAACTTTCCAAAATTGTATGTTCTA---TCATCATTTACAAACATA 143104 Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTA 116482 | || || || || | |||||| || | ||||| || || || || |||| Sbjct 143103 TTCAAAGCAATAGAAGCTAAATTACATACTGCTACTTCATCTACTGAT--GTATATTCTA 143046 Query 116483 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 116542 ||||| ||||| | ||| || ||||| || || | || || ||||| |||| Sbjct 143045 CTATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTTCTGATTACTCTTTC 142986 Query 116543 TGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 116602 ||||||| | ||| ||||| | ||| |||| || || || || ||| | | | || Sbjct 142985 TGTTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAACTTGTGCTTCTACAA 142926 Query 116603 TAGCCTTCCATA 116614 |||||||||||| Sbjct 142925 TAGCCTTCCATA 142914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613197693286440