Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4459 89.7 6e-13
>seq4459
Length=154925
Score = 89.7 bits (98), Expect = 6e-13
Identities = 246/372 (66%), Gaps = 9/372 (2%)
Strand=Plus/Minus
Query 116246 CATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAG 116305
|||| || | ||||||||| || | || ||||| | ||||| |||||| || ||| ||
Sbjct 143279 CATCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTCGCATATTGGAGTTTTTAG 143220
Query 116306 CGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 116364
| ||| | | |||||| |||| ||| |||| |||| || |||| || | |
Sbjct 143219 CT-TCTGGAACTGGATAATAATTGACATCTATAATTTTATTAAGGTTTTGTGTTATGATT 143161
Query 116365 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 116424
||||| | ||| | | |||| | ||| | | | | || ||||| ||| || ||
Sbjct 143160 TTTGTAACTTCTTTTAACTTTCCAAAATTGTATGTTCTA---TCATCATTTACAAACATA 143104
Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTA 116482
| || || || || | |||||| || | ||||| || || || || ||||
Sbjct 143103 TTCAAAGCAATAGAAGCTAAATTACATACTGCTACTTCATCTACTGAT--GTATATTCTA 143046
Query 116483 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 116542
||||| ||||| | ||| || ||||| || || | || || ||||| ||||
Sbjct 143045 CTATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTTCTGATTACTCTTTC 142986
Query 116543 TGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 116602
||||||| | ||| ||||| | ||| |||| || || || || ||| | | | ||
Sbjct 142985 TGTTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAACTTGTGCTTCTACAA 142926
Query 116603 TAGCCTTCCATA 116614
||||||||||||
Sbjct 142925 TAGCCTTCCATA 142914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613197693286440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |