Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3626 165 2e-35
seq2492 91.5 3e-13
seq4182 89.7 1e-12
>seq3626
Length=201135
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| |||||||| ||||| ||||| ||||| | ||||||||||| | || | ||| |||
Sbjct 59504 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCT 59445
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| ||||| || || ||||| || |||||||||||| || |||||| ||
Sbjct 59444 TCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCT 59385
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| ||| ||||| || |||| || ||||| || || || ||||||
Sbjct 59384 TGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATCGTC 59325
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||||||||| |||||||||||
Sbjct 59324 TTACCTGTGAGAGTTTTAACAAAAATTTG 59296
Score = 129 bits (142), Expect = 1e-24
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| || | ||| |||||||| ||||| ||||| ||||| | ||||||||||| || ||
Sbjct 59742 TCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGT 59683
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| |||||||||| || ||||| || |||||||| ||||| ||||| ||| || ||
Sbjct 59682 TCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCC 59623
Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586
||| ||||| || ||| || || || || | ||||||| | ||| || ||||
Sbjct 59622 TTCCTTGTCCTGGAT-TTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCA 59564
Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| || || ||||| || || ||||| || ||||| || ||
Sbjct 59563 AAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTG 59524
Score = 129 bits (142), Expect = 1e-24
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| |||||||| ||||| ||||| ||||| | ||||||||||| || || | ||||||
Sbjct 59960 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59901
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||| || ||||| || |||||||| ||||| ||||| ||| || ||||| |||
Sbjct 59900 TCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCC 59841
Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| || ||| || || || || | ||||||| | ||| || ||||| || || ||
Sbjct 59840 TGGAT-TTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATAGT 59782
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || ||||| || ||||| || ||
Sbjct 59781 CTTTCCAGTAAGAGTCTTGACAAAGATCTG 59752
Score = 100 bits (110), Expect = 7e-16
Identities = 145/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| | ||| || |||||||| | ||| ||||||| | || | ||||||||||| ||
Sbjct 60180 GTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGGGTTCGCCCATCTTCCAGTTG 60121
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
|||||| || ||||| || ||||| ||||| ||| || ||||| ||||| || ||
Sbjct 60120 CTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGAT-TT 60062
Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604
| || || || || | ||||||| | ||| || || || || || ||||| || |
Sbjct 60061 TGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCTAATGTAATGGTCTTTCCAG 60002
Query 199605 TGAGAGTTTTCACAAAAATTTG 199626
| ||||| || ||||| || ||
Sbjct 60001 TAAGAGTCTTGACAAAGATCTG 59980
>seq2492
Length=83244
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
|||||| || | ||||| || || || ||||||| |||||||| | | || | ||
Sbjct 40785 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGACC 40844
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| |||||||||||||| |||||||| | ||||||||| || || || |||
Sbjct 40845 ATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40904
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || ||| || ||| | ||||| | || || || || | |||||
Sbjct 40905 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGTGTGAT 40964
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || | || || || ||||| ||
Sbjct 40965 GGTTTTGCCAGTTAAGGTCTTTACGAAAATCTG 40997
>seq4182
Length=188933
Score = 89.7 bits (98), Expect = 1e-12
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||||| || | || |||||||| || | |||||||| | || || | |||
Sbjct 74284 CTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGATAATGTGCGGCCA 74343
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||||||||| || || || ||||| | ||| ||||| ||||| ||| ||||||
Sbjct 74344 TCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGAATACCTTCTTTA 74403
Query 199535 TCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||| ||| || || || ||| | || || | | || || || | |||||
Sbjct 74404 TCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCACCTCGAGGGTGAT 74462
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || ||||| || || || ||
Sbjct 74463 GGTTTTCCCCGTAAGGGTTTTTACGAATATCTG 74495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178311980009053
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |