Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3626 165 2e-35 seq2492 91.5 3e-13 seq4182 89.7 1e-12 >seq3626 Length=201135 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| ||||| ||||| | ||||||||||| | || | ||| ||| Sbjct 59504 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCT 59445 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| ||||| || || ||||| || |||||||||||| || |||||| || Sbjct 59444 TCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCT 59385 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| ||||| || |||| || ||||| || || || |||||| Sbjct 59384 TGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATCGTC 59325 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||||||||| ||||||||||| Sbjct 59324 TTACCTGTGAGAGTTTTAACAAAAATTTG 59296 Score = 129 bits (142), Expect = 1e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | ||| |||||||| ||||| ||||| ||||| | ||||||||||| || || Sbjct 59742 TCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGT 59683 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||| || ||||| || |||||||| ||||| ||||| ||| || || Sbjct 59682 TCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCC 59623 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 ||| ||||| || ||| || || || || | ||||||| | ||| || |||| Sbjct 59622 TTCCTTGTCCTGGAT-TTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCA 59564 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || ||||| || || ||||| || ||||| || || Sbjct 59563 AAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTG 59524 Score = 129 bits (142), Expect = 1e-24 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| ||||| ||||| | ||||||||||| || || | |||||| Sbjct 59960 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59901 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| || ||||| || |||||||| ||||| ||||| ||| || ||||| ||| Sbjct 59900 TCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCC 59841 Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || || ||| || || || || | ||||||| | ||| || ||||| || || || Sbjct 59840 TGGAT-TTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATAGT 59782 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || ||||| || ||||| || || Sbjct 59781 CTTTCCAGTAAGAGTCTTGACAAAGATCTG 59752 Score = 100 bits (110), Expect = 7e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| || |||||||| | ||| ||||||| | || | ||||||||||| || Sbjct 60180 GTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGGGTTCGCCCATCTTCCAGTTG 60121 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||| || ||||| || ||||| ||||| ||| || ||||| ||||| || || Sbjct 60120 CTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGAT-TT 60062 Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | || || || || | ||||||| | ||| || || || || || ||||| || | Sbjct 60061 TGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCTAATGTAATGGTCTTTCCAG 60002 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 | ||||| || ||||| || || Sbjct 60001 TAAGAGTCTTGACAAAGATCTG 59980 >seq2492 Length=83244 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 |||||| || | ||||| || || || ||||||| |||||||| | | || | || Sbjct 40785 TCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGACC 40844 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| |||||||||||||| |||||||| | ||||||||| || || || ||| Sbjct 40845 ATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 40904 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| || ||| | ||||| | || || || || | ||||| Sbjct 40905 GTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGTGTGAT 40964 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | || || || ||||| || Sbjct 40965 GGTTTTGCCAGTTAAGGTCTTTACGAAAATCTG 40997 >seq4182 Length=188933 Score = 89.7 bits (98), Expect = 1e-12 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||||| || | || |||||||| || | |||||||| | || || | ||| Sbjct 74284 CTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGATAATGTGCGGCCA 74343 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||||||||| || || || ||||| | ||| ||||| ||||| ||| |||||| Sbjct 74344 TCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGAATACCTTCTTTA 74403 Query 199535 TCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| ||| || || || ||| | || || | | || || || | ||||| Sbjct 74404 TCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCACCTCGAGGGTGAT 74462 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || || Sbjct 74463 GGTTTTCCCCGTAAGGGTTTTTACGAATATCTG 74495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178311980009053