Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4146 307 1e-78 seq4182 104 3e-17 seq2492 95.1 1e-14 >seq4146 Length=100757 Score = 307 bits (340), Expect = 1e-78 Identities = 840/1264 (66%), Gaps = 53/1264 (4%) Strand=Plus/Minus Query 98702 AAAACAATGTGCCTTTTACA-AAACA-CACGGACAAAGTTACGGGGGCTTATTTTGTAGA 98759 ||||||| |||||||| | |||| || ||| |||| || ||||||||||| || Sbjct 16663 AAAACAA---GCCTTTTAAACAAACTTCAGGGA--AAGTCGTCGGAGCTTATTTTGTGGA 16609 Query 98760 ATGGGGTGTTTACGATCGCAAATTTCCAGCAGATAAAGTGCCTATCCCCAATTTGACACA 98819 |||||||||||| | | ||||| |||| |||||| || || || || ||| | ||||| Sbjct 16608 GTGGGGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGTACCCATTCCAAATCTTACACA 16549 Query 98820 CCTTTTGTATGGTTTTATCCCCATTTGCGGAGGCGACGGTATAAACGACAGTCTAAAACA 98879 ||| | || || ||||||||||| || || || ||||| || ||||||||| ||||| | Sbjct 16548 TCTTCTTTACGGATTTATCCCCATCTGTGGCGGTGACGGAATTAACGACAGTTTAAAAGA 16489 Query 98880 AGTGCCGGGATCTTTTGAGACGTTACAAAAATCGTGCGATAAGAGAGATGATTTCAAGGT 98939 | | ||| ||| | | || |||| ||| ||| | |||| || ||||| || Sbjct 16488 AATCGAAGGAAGTTTCCAAGCTTTGCAAAGATCTTGCAGCGGGCGAGAGGACTTCAAAGT 16429 Query 98940 GAGCATCCACGATATTTACGGTGCTCTACAGAAACCACAACAGGGTGTCTCCGATTATAA 98999 ||||| || || | ||| |||| |||||||| ||||| | ||| | || Sbjct 16428 TTCTATCCATGACCCTTGGGCAGCTTTACAAAAACCACAGAAGGGTTTGTCCTCCTGGAA 16369 Query 99000 CGAGCCTTACCGTGGCAATTTCGGACAGCTTATGGCCATACGTAAACAC---AACCCACA 99056 ||| |||||| ||||| || ||||| || ||| | | ||||| | || | Sbjct 16368 CGAACCTTACAAAGGCAACTTTGGACAACTGATGTCTTTG---AAACAAGCTAGACCTGA 16312 Query 99057 TCTAAAAATCCTACCCAGTATCGGTGGTTGGACTCTTAGCGACCCCTTCTATTTTTTCGC 99116 | | || | || || ||||| || ||||| || || || ||||| ||||| | Sbjct 16311 TTTGAAGGTTCTTCCATCAATCGGAGGCTGGACACTGGCAGATCCATTCTACTTTTTTGA 16252 Query 99117 CGATGA--TTACAAGCGCAAAGTGTTCGTAGACTCGGTTCGTGAATTCCTACAGGTGTGG 99174 ||| | | | ||| | | || || || | || || || ||||| || ||| Sbjct 16251 TGATAAGGTAAAAAGAG-ATCGTTTT-GTGGCATCAGTGAAAGACTTCCTCCAAACTTGG 16194 Query 99175 AAATTTTTCGACGGTGTAGACATCGACTGGGAGTTTCCTGGCGGAAAGGGGGCCAACCCT 99234 ||||| ||||| ||||| ||||| || |||||||| ||||| ||||| || || || ||| Sbjct 16193 AAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGGAAAAGGTGCTAATCCT 16134 Query 99235 GAAGTAGGAAATCCTAATGAGGACGGAAACACTTATGTCACACTTCTGCAAGAGCTTCGT 99294 | | || || ||||| ||| | ||| ||| ||| || ||||| | ||| Sbjct 16133 AACCTCGGTGGACCAAATGA---CGGTGAAGTTTACGTCCAGCTTATGAAAGAGTTACGT 16077 Query 99295 TTGATGCTTGACGAATT-------GGGTGTGGCCAATAAACGTGTTTACGAACTGACAAG 99347 ||||| |||| || | | ||| || ||| || ||||||||| Sbjct 16076 GAAATGCTGAACGAGTTATCCGCAGAGACTGGT-AAGAAA------TATGAACTGACATC 16024 Query 99348 TGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTCGATTACTCTACAGC-CAGTCAAT 99406 || | | || |||| ||||||||| | || || || ||| | ||| ||| |||| Sbjct 16023 CGCTATTAGTGCTGGTTGGGATAAAATCCAAGTAGTTGACTACAGGAAAGCTCAG-CAAT 15965 Query 99407 ATTTGGACCATGTGTTTTTAATGAGTTACGATTTTAAAGGCGCCTGGTCCAACACCGACT 99466 || |||| ||| | || |||||||||||||| |||||||| || ||||| || | ||| Sbjct 15964 ATATGGATCATATCTTCTTAATGAGTTACGACTTTAAAGGAGCGTGGTCAAATGAC-ACT 15906 Query 99467 -TGGGTCATCAAACACCATTGTATGCACCATCGTGGAACTCCGAA-GAGAGATACACAAC 99524 | || ||||||||||| ||||| ||||| | ||||| ||| || || | |||||||| Sbjct 15905 CTTGGACATCAAACACCGTTGTACGCACCTGCATGGAA-TCCAAAGGAAACCTACACAAC 15847 Query 99525 CGATTATGCGGTTAAACAGCTATTAAAGAAAAAAGTGCCTTCTCACAAGATTGTAGTGGG 99584 || | || |||||| | || ||| || ||| || | |||||| |||| || Sbjct 15846 TGACTTTGGAGTTAAAAACCTCTTAGCCCAAGGAGTCAACCCTAAGAAGATTATAGTTGG 15787 Query 99585 AGTCGCCATGTACGGCAGAGGATGGAGTGGAGTGCATGACTACAAAAATAATAACGTTTT 99644 || || ||||| || | || |||| |||||| || |||||| | ||||||| ||| Sbjct 15786 TGTAGCGATGTATGGTCGTGGTTGGACTGGAGTCCAAAACTACACAGATAATAATCCTTT 15727 Query 99645 TACGGGTGTGGCCACGGGACCGGTAAAAGGCACCTGGGAAAACGGTGTTGTTGATTATAG 99704 || || || ||||| || || ||||| |||||| | | ||||| || || || || Sbjct 15726 CACTGGAGTAGCCACAGGTCCTTGTAAAGGGACCTGGCAGGATGGTGTGGTCGACTACAG 15667 Query 99705 GCAGGTCGAAGAGCTCAAA----AACA-ACAATTACACATACGCATACGACAAAGTGGCC 99759 || | | | | | ||| | || || | | | || || || ||||| Sbjct 15666 AGAGATTGCAAA--TGAAATTGCAGCAGGGAAATGGGAGTTCCATTATGATAATGTGGCA 15609 Query 99760 GAGGCGGCATATATTTACGGTGGCGCCGACCAGGCGTTGAATTTAATTTCTTACGACGAC 99819 | ||| |||| | | | || ||| |||| | | ||||| | |||||| | Sbjct 15608 CAAGCGCCATACGTCTTCCGTCCTGCC--ACAGG----GGACCTAATTACATACGACAAT 15555 Query 99820 TCATCGTCTGTACTAGCAAAAGGTAATTACGTTTTACAAAACAATCTCGGAGGTTTATTT 99879 || || || ||| ||||| || || ||| | | || || ||||| ||||| ||| Sbjct 15554 CCAAGATCCGTTATAGAGAAAGGAAAGTATGTTAGAAATAATAAGCTCGGTGGTTTGTTT 15495 Query 99880 GCTTGGGAAATCGATGCCGACAACGGTGACTTGTTAAACGCCATGAACACAGGTTTGGGT 99939 || |||||||| ||||| || | || ||||| || || || ||||| | ||| | || Sbjct 15494 GCGTGGGAAATAGATGCAGATACTGGGGACTTATTGAATGCTATGAATATGGGTCTTGGG 15435 Query 99940 AACA 99943 |||| Sbjct 15434 AACA 15431 >seq4182 Length=188933 Score = 104 bits (114), Expect = 3e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 46363 TTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTC 46422 ||| ||||||||||| | |||||| ||||| || ||| |||||| || ||||||||||| Sbjct 74268 TTTACCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTC 74327 Query 46423 GGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGC 46482 ||||| ||||| | || || ||||| || || || || ||||| || ||||| || | Sbjct 74328 GGATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGG 74387 Query 46483 CGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC 46542 || | | || || || || || || | | | | || ||| | || Sbjct 74388 TGGAATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTC 74447 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||| || | ||||||||||| ||||| || ||||| || || || |||||| Sbjct 74448 CACCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCATT 74499 >seq2492 Length=83244 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 46357 ATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATT 46416 |||||| ||||| || || || | || || | ||| | || || ||||||||||| Sbjct 40080 ATATTAATTGCCACCCCTCAATCTCAGTACTAAATGGAGAGTGGATTCTTTTTGGATATT 40139 Query 46417 GTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTG 46476 |||||| ||||| ||||| | || || |||||||||||||| || || | | |||||| Sbjct 40140 GTAGTCCGATAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTG 40199 Query 46477 GTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCT 46536 ||| | || | | ||| ||||| ||| || ||| | | | | ||||| Sbjct 40200 GTCTGGTGGGATACCCTCTTTGTCTTGGATTTTAGCCTTAACATTTTCTATGGTGTCTGA 40259 Query 46537 CGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | |||||||||||||| || | || || || || |||||||| Sbjct 40260 TGGCTCAACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATTTGCAT 40316 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | || |||| ||| | ||| || ||||||||||||||||| || Sbjct 40546 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40605 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||||||||| || || | | ||||||||| | || Sbjct 40606 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40665 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| ||| || ||| | | | | ||||| | || || Sbjct 40666 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAACT 40725 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||||||||| |||| || || || || || ||||| Sbjct 40726 TCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | || |||| ||| | ||| || ||||||||||||||||| || Sbjct 41002 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAG 41061 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||||||||| || || | | ||||||||| | || Sbjct 41062 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41121 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| ||| || ||| | | | | ||||| | || || Sbjct 41122 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACT 41181 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||||||||| |||| || || || || || ||||| Sbjct 41182 TCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | || |||| ||| | ||| || || |||||||||||||| || Sbjct 40318 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAG 40377 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||||||||| || || | | ||||||||| | || Sbjct 40378 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40437 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| ||| || ||| | | | | ||||| | || || Sbjct 40438 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACT 40497 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||||||||| |||| || || || || || ||||| Sbjct 40498 TCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 40544 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | || |||| ||| | ||| || ||||||||||||||||| || Sbjct 41686 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAG 41745 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||| || || || || | | ||||||||| | ||| Sbjct 41746 AGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCGGG 41805 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| ||| || ||| | | | | ||||| | ||| || Sbjct 41806 ATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTACC 41865 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | || || |||||||| || || || || ||||| || ||||| || Sbjct 41866 TCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTT 41915 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | || |||| ||| | ||| || ||||||||||||||||| || Sbjct 40774 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40833 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||| ||||| || || | | ||||||||| | || Sbjct 40834 AGTGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40893 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCC 46543 | | ||| ||||| ||| || ||| | | | | ||||| |||| || Sbjct 40894 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTC---CGATGGCTCA 40950 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||||||||| || | || || || || || ||||| Sbjct 40951 ACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | || |||| ||| | ||| || ||||||||||||||||| || Sbjct 41230 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAG 41289 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || |||||||||||||| || || | | ||||||||| | || Sbjct 41290 AGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 41349 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCC 46543 | | ||| ||||| || || ||| | | | | ||||| |||| || Sbjct 41350 ATACCCTCTTTGTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTC---CGATGGCTCA 41406 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | || ||||||||||| |||| || || ||||| || ||||| Sbjct 41407 ACTTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564953244292680