Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq4146 275 4e-69
seq3626 104 2e-17
>seq4146
Length=100757
Score = 275 bits (304), Expect = 4e-69
Identities = 801/1218 (66%), Gaps = 43/1218 (4%)
Strand=Plus/Plus
Query 5820 CCCAA-ACCGGTGTTCATTGCATTTAAAAGATCACCGTTGTCCGCGTCTATTTCCCACGC 5878
||||| ||| | ||||| ||||| || | || || | || || ||||||||||||||
Sbjct 15435 CCCAAGACCCATATTCATAGCATTCAATAAGTCCCCAGTATCTGCATCTATTTCCCACGC 15494
Query 5879 AAATAAACCACCCAAATTTTTGCTCACTACATACTTACCTTTTGCTACCACCGATTGATC 5938
||| |||||||| | || || | |||||||| ||||| ||| || |||
Sbjct 15495 AAACAAACCACCGAGCTTATTATTTCTAACATACTTTCCTTTCTCTATAACGGATCTTGG 15554
Query 5939 GTTGTCGTACGTAACTAAATCATTATTATC------GTAGACGTACGGAGATTGTGCAAT 5992
|||||||| |||| || || | | | ||||||| || | |||||| |
Sbjct 15555 ATTGTCGTATGTAATTAGGTCCCCTGTGGCAGGACGGAAGACGTATGGCGCTTGTGCCAC 15614
Query 5993 GTTATCATAGAATTGTACAC---TTTC---GTCGTACCT--ATTTACAATATCTTTATAA 6044
|||||||| || | || | |||| | | | | |||| |||| ||| | ||
Sbjct 15615 ATTATCATA--ATGGAACTCCCATTTCCCTGCTGCAATTTCATTTGCAATCTCTCTGTAG 15672
Query 6045 TCGATTACGCCGCTTTCCCATGTACCTTTAACGGGAGCGCTAGCTATTCCTGTAAACGGA 6104
|||| || || | ||| || |||||| ||| | | |||| ||| || || |||
Sbjct 15673 TCGACCACACCATCCTGCCAGGTCCCTTTACAAGGACCTGTGGCTACTCCAGTGAAAGGA 15732
Query 6105 TTATTGTTTTCGACTCGATGCACACCGCTCCAGCCGCGTCCATACATAGCCACACCTACT 6164
||||| | | | || || || |||| || || |||||||| || ||||| |||
Sbjct 15733 TTATTATCTGTGTAGTTTTGGACTCCAGTCCAACCACGACCATACATCGCTACACCAACT 15792
Query 6165 ACTAAT-TTAGTCGAATCGACATTTTGATTTAACAATCTGTTAATAGCAAAATGGGTTGT 6223
| |||| || | | | ||| ||| ||| | | |||| |||| | |||||
Sbjct 15793 A-TAATCTTCTTAGGGTTGACTCCTTGGGCTAAGAGGTTTTTAACTCCAAAGTCAGTTGT 15851
Query 6224 GTAATTTTCGTTAACGTCCCACGAAGGAGCGTAAAGCGGTGTTTGAAAACCCAAATTTTC 6283
||| |||| || | ||| | ||| ||||| | |||||||||| || | | | ||
Sbjct 15852 GTAGGTTTCCTTTGGATTCCATGCAGGTGCGTACAACGGTGTTTGATGTCCAAGAGTGTC 15911
Query 6284 CATGGACCAAGCGCCTTTAAAATCGTAGGTCATTACAAATATATAATCGAGATAGCGTTG 6343
| ||||| || |||||||| ||||| |||||| || |||| ||| | ||| | ||
Sbjct 15912 ATTTGACCACGCTCCTTTAAAGTCGTAACTCATTAAGAAGATATGATCCATATATTGCTG 15971
Query 6344 CGCGTCTGTATAATCGACAACGTCGATTTTGTCGTAACCGGCACCGATAGCGCTAGTTAG 6403
|| | | || || || || | |||||| || |||| |||| |||||| || ||
Sbjct 15972 AGCTTTCCTGTAGTCAACTACTTGGATTTTATCCCAACCAGCACTAATAGCGGATGTCAG 16031
Query 6404 TTGCAATCGTTTACCTCTCtttttttCCAATTTGTTGAGCATTTCGCGTAACTCCTTTAA 6463
|| || ||||| ||| | || | ||| |||||||| |||||||| || |
Sbjct 16032 TTCATATTTCTTACCAGTCTCTGCGGATAACTCGTTCAGCATTTCACGTAACTCTTTCAT 16091
Query 6464 AAGTATTGTA--TATGTTTTGCGATCCACTGAAGCGTTGCCCAGCGACG----GGTTGGC 6517
||| || | || || | || || | ||| ||| | | || ||
Sbjct 16092 AAGC--TGGACGTAAACTTCACCGTCATTTG-------GTCCACCGAGGTTAGGATTAGC 16142
Query 6518 ACCTTTACCGCCCGGAAACTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCACGTTTC 6577
|||||| || || || ||||||||||| ||||| || || ||||| |||||||| ||||
Sbjct 16143 ACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTCCAAGTTTG 16202
Query 6578 CAAAAATTCGCGCACACTATCAACAAACGTATTTCGTTTTTCGACGTCGTTTAACTGGTA 6637
| || || ||| | ||||| || || |||| | || | || |||
Sbjct 16203 GAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTTACCTTATCATCAAAAAAGTA 16262
Query 6638 AAACGGATCGCTAAGCGTCCATCCGCCTATCGATGGCAATATTGTTAAATCTGGATTGTG 6697
|| ||||| || ||||| || || || ||||| | | | ||||| || | |
Sbjct 16263 GAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATCAGG--TCTA 16320
Query 6698 GC--GCTTGATCGCCATTAACTGTCCAAAGTTTCCTTTGTACGGTTCGTTGTAGGCCTCG 6755
|| | || | | ||| | ||||||||||| |||||||| |||||||| |||
Sbjct 16321 GCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCAGGAGGAC 16380
Query 6756 ACACCTTTTTGTGGTTTTTGAAGCGCTCCCCATATATCATGAATGGTTACTTTGAAATCT 6815
| ||| || ||||||||||| | ||| |||| ||||| || | |||||||| ||
Sbjct 16381 AAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTTGAAGTCC 16440
Query 6816 TTTCGGCCGGCGCACGATTTTTGCAACGCCTC-AAACGAACTGGGTATTTGTTGTTTAAG 6874
| ||| ||| ||| ||| ||||||| || | |||| || | |||| || ||||
Sbjct 16441 TCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCG-ATTTCTT--TTAAA 16497
Query 6875 CGCATCGTTTACACCATCGCCGCCACAAATTGGTATAAACCCGTACAACAAATGTGTAAG 6934
| ||||| | || || |||||||| || || ||||| ||||| | | |||||||||
Sbjct 16498 CTG-TCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGATGTGTAAG 16556
Query 6935 ATTAGGAATGGGAATTTTGTCGGCGGGATATTGTCTATCGTAAACACCCCATTCCACAAA 6994
||| |||||||| | || || | || ||| |||| |||||||||||| ||||||||
Sbjct 16557 ATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCACAAA 16616
Query 6995 GTAAGCGCCCACAACATT 7012
||||| || || || ||
Sbjct 16617 ATAAGCTCCGACGACTTT 16634
>seq3626
Length=201135
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||||| ||||||||| | || | |||| |||||||| || || || || | |
Sbjct 59747 CCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59688
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| || |||| ||||||||||| || |||| || | ||||| || || | ||
Sbjct 59687 AGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59628
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||||| ||| | || | | |||||||| ||| ||
Sbjct 59627 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59568
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||||||| || || || || | ||| || || |||||||||||
Sbjct 59567 TCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
Score = 95.1 bits (104), Expect = 8e-15
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 39489 ATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATC 39548
|| ||| ||||| | ||| | |||||| ||||||||| ||| ||||| || ||||| ||
Sbjct 60207 ATTGCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTC 60148
Query 39549 GGCCAAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCC 39606
| ||| | || |||| |||| ||| || || |||| || | ||||| || ||
Sbjct 60147 AG--AAAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCT 60090
Query 39607 GAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT 39666
| || | |||||| ||||| ||||| ||| | || | | |||||||| |
Sbjct 60089 GGAGGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGT 60030
Query 39667 TCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || || ||||| || || || || | ||| || || |||||||||||
Sbjct 60029 TCAACTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||||| ||| || || | || | |||| |||||||| || || || || | |
Sbjct 59975 CCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAC 59916
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| || |||| |||| |||||| || |||| || | ||||| || || | ||
Sbjct 59915 AGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGG 59856
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||||| ||| | || | | |||||||| ||| ||
Sbjct 59855 ATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACT 59796
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||||||| || || || || | ||| || || |||||||||||
Sbjct 59795 TCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347198737469447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |