Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4459 138 1e-27 >seq4459 Length=154925 Score = 138 bits (152), Expect = 1e-27 Identities = 874/1387 (63%), Gaps = 44/1387 (3%) Strand=Plus/Minus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||| | ||||||||| |||||||||| || | || || || || || || |||||||| Sbjct 143610 GTGAATGGTTCAAAGGATTCATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATA 143551 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 || |||| | ||| ||||||| || | || || ||| || ||| || || Sbjct 143550 GGCGCCAGTAGCAGAGAATTACGAATTCCATGTTTAGCTATTTTTTCTTTAAGAGCAACC 143491 Query 106067 CAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124 || || || || | | || || |||| ||||||||||||| | | ||||||| Sbjct 143490 CAATCCCAGA-GATCAGTGGGAGTCTTATTCC-ACATATCAAATTGCAAAATCCCTTGGC 143433 Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184 ||| ||| ||| ||| ||| || | || || ||||||||||| | Sbjct 143432 TAACAGGACTACCTTCATATGAACTATAAACTCCCTCTTTCTCTGCTAATTCACAGCTAG 143373 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | |||| | | ||| ||| || || ||||| || | || | | | |||| | Sbjct 143372 CTTCCAAAGCTCCGTAATAGATAGTCTCAAATATCTGTTGGTTTAACAACAATGCTTTTT 143313 Query 106245 CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 106304 | ||| | | |||||| || | ||| |||| || | |||||| || || | || Sbjct 143312 CACTTTCATAAGGGTAGCGCATCAGCACAAAGGCATCAGCTAAACCTTGGACTCCAATAC 143253 Query 106305 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTG 106363 | || ||||| ||||||||||| || ||| || ||| ||| |||||| |||| Sbjct 143252 CTATTGGTCTATGTCGCATATTGGAGTTTTTAGCT-TCTGGAACTGGATAATAATTGACA 143194 Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423 || || | | || || |||| || | || ||||| | ||| | | ||| || || Sbjct 143193 TCTATAATTTTATTAAGGTTTTGTGTTATGATTTTTGTAACTTCTTTTAACTTTCCAAAA 143134 Query 106424 TCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 106483 | | || | | || ||||| ||| || | | || || || || ||||| || Sbjct 143133 TTGTATGTTCTA---TCATCATTTACAAACATATTCAAAGCAATAGAAGCTAAATTACAT 143077 Query 106484 ACAGCCGTCTCATC--CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541 || || ||||| || || || || |||| ||||||||||| | || || | Sbjct 143076 ACTGCTACTTCATCTACTGAT--GTATATTCTACTATTTCTGTACATAGATTACTACATT 143019 Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGT 106601 |||| || || | ||| || || ||||||||| |||| || | ||| ||||| | |||| Sbjct 143018 TAATTGTTCCTAGATTTTTCTGATTACTCTTTCTGTTACATGAATCTTTGTATAACATGA 142959 Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTA 106661 | || || || || || |||| | | ||| |||||||| | | | || || Sbjct 142958 ATGGAGTGCCTGTTTCAACTTGTGCTTCTACAATAGCCTTCCATAAAACTTGTGCCCTTA 142899 Query 106662 CAATGGCGTTGGC---CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 106718 | || ||| | | | || ||| |||||| || || ||||||||||| | Sbjct 142898 C-TTG--TTTGACAAATCTTTTTTCATTCTCATACTTTTCATACAGAGCTTCAAACTCTT 142842 Query 106719 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 106778 | ||| || | | ||| || | | ||||| | | | ||| | || Sbjct 142841 CTCCCCAACAATCTGCCAAACCAGGACAGTCATGGGGACACATCAAACTCCAATTTTCAT 142782 Query 106779 CCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 106838 | ||||| | ||||| || | ||||| ||||| | | |||| | || ||| Sbjct 142781 TTTTTTCAACTCTTTTCATAAACAAATCTGGTATCCATAAAGCATAAAACAATTCCCTAG 142722 Query 106839 ACCGAGCCTCTTCGTCACC----TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894 ||| | ||||| | || || || || | || || ||||| | | ||| Sbjct 142721 CTCGAACTTCTTCTTTGCCAGTATTCTTT--TTCAGATCTAAA--AACTCAAACACATCT 142666 Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGA 106948 | |||||||| || | ||| || || | || || | ||||| ||| ||||| Sbjct 142665 GAATGCCATGGTTCTAAATATACAGC---AAATGCCCCTGGACGCTTGTTACCACCTTGA 142609 Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008 | |||||| | |||||| |||| |||| | | |||||| | || |||| |||| | Sbjct 142608 TCTACATATCTGGCTGTGCTGTTATATACTCTTAACATTGGGACAAGTCCATTTGATACA 142549 Query 107009 CCATTTGTCCCCCGAATACGAGATTTA---TTGGCTCTCACATCATGGATGTGCATCCCA 107065 |||||||| || |||| || || || ||||| | | || | || | |||| Sbjct 142548 CCATTTGTGCCAGCTATAC---ATGTACCTTTAGCTCTGATACAGTGAACATGAAGCCCA 142492 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 || || || || | || || || ||||| | | ||||| |||| || || | Sbjct 142491 ATGCCACCTGCAGATTTAGATATCAAGGCACATTGTTTCAGAGTGTCATATATTCCCTCA 142432 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||| || || |||| | | ||| ||| |||| || |||||||| ||| || Sbjct 142431 ATACTGTCATCTTTCATGGCCAATAAGAAACAAGATGACAATTGAGGTCTTGGAGTAGCA 142372 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGT 107244 ||| || | || || | |||||| |||| |||| | | |||| || || || Sbjct 142371 GCAGAAAATAAAGTAGGACTGGCGTGAGTGAA-ATACTTCTCAGACAATAAGTTATAGGT 142313 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTA 107304 | | | |||||||||||||| || || || || || || |||||||| | ||| | Sbjct 142312 GTTAATAGCTGAATCAATGTCTTCTCCATGTATTCCAATAGCTACACGCATTAGCATATG 142253 Query 107305 TTGGGGT 107311 ||| ||| Sbjct 142252 TTGTGGT 142246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589683162061160