Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq4459 623 1e-173
seq409 134 2e-26
>seq4459
Length=154925
Score = 623 bits (690), Expect = 1e-173
Identities = 1210/1791 (68%), Gaps = 26/1791 (1%)
Strand=Plus/Minus
Query 46967 TTTGTCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATA 47026
|||| ||| || || ||||| | |||| ||| || | |||||| |||||||||||
Sbjct 144016 TTTGGATTTATCTACTGTAAATTGGATTGCATTTGCTGCAGGTTTTGTACGTAAATAATA 143957
Query 47027 CATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATA 47086
||| || || |||||||| | |||| |||| ||||| || || | |||| |||
Sbjct 143956 CATGCCTGTTTTTAAACCCATTTTCCAAGCATAAAAATGTATGGACGTCAGTTTACCATA 143897
Query 47087 ACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATC 47146
| | ||||| | | ||||||||||| ||| ||||| || || |||||||||||||||||
Sbjct 143896 ATTTGGTTCAGCTACATGAATATTAAAAGACTGACTTTGGTCTATAAATGCACCTCTATC 143837
Query 47147 AGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTT 47206
||| ||||| | | | || | | || ||||||||||| ||||| | | | |
Sbjct 143836 AGCAGCCATCTGAATAGTAGTTTTCACAGAAATTTCCCATACTGTCTTATACAAATCTCT 143777
Query 47207 AATGTCTTCTGGGA---GATT-AGTATTTTGAATAGATCCTCCgttttctataattttgt 47262
|| |||| ||||| | || | |||| |||| || || || | | ||| |
Sbjct 143776 GATATCTT-TGGGAATAGTTTCAATATTCTGAACTGAACCATTATTATGAAGAATAAGAT 143718
Query 47263 tttttaattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAA 47322
|||| | |||| ||| | | | || ||| || | ||||||||||| ||||||
Sbjct 143717 TTTTCATGTCATCGTCCCATAAATCTGCTTGAGTCAAATCTCTTAAAAGATGATGATTAA 143658
Query 47323 CAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTA 47382
| | ||||||||| || |||| ||||| | |||||||| || ||||||| |
Sbjct 143657 CGACTTGAAATTCGCCTGATAATACTCGTCTTTGGTATATATTTGAAGTGAATGGTTCAA 143598
Query 47383 TAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATA 47442
||||||||||| |||| || ||||| || ||||| || ||||| | || | || |
Sbjct 143597 AGGATTCATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATAGGCGCCAGTAGCA 143538
Query 47443 AGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGAT 47502
||| | | ||||| ||| ||| | ||||||||| ||||
Sbjct 143537 GAGAATTACGAATTCCATGTTTAGCTATTTTTTCTTTAAGAGCAACCCAATCCCAGAGAT 143478
Query 47503 CTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCAT 47562
| | ||| |||||| | |||| |||| | ||| |||| || | ||| ||| |
Sbjct 143477 CAGTGGGAGTCTTATTCCACATATCAAATTGCAAAATCCCTTGGCTAACAGGACTACCTT 143418
Query 47563 TATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTAT 47622
||||| ||||| || | | | || | |||||| || |||||||| || | |
Sbjct 143417 CATATGAACTATAAACTCCCTCTTTCTCTGCTAATTCACAGCTAGCTTCCAAAGCTCCGT 143358
Query 47623 AATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGAT 47682
|||| || || |||||||| | | ||||| | ||||| | |||| |||| |
Sbjct 143357 AATAGATAGTCTCAAATATCTGTTGGTTTAACAACAATGCTTTTTCACTTTCATAAGGGT 143298
Query 47683 ANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAG 47742
| || | ||| || || ||||| || |||||||| |||||||||||
Sbjct 143297 AGCGCATCAGCACAAAGGCATCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTC 143238
Query 47743 TTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTA 47802
|||| || | ||||||||| | |||||| | || | ||||||||||||||| |
Sbjct 143237 GCATATTGGAGTTTTTAGCTTCTGGAACTGGATAATAATTGACATCTATAATTTTATTAA 143178
Query 47803 GANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTAT--T 47860
| || |||| |||| || ||||| | | ||| |
Sbjct 143177 GGTTTTGTGTTATGATTTTTGTAACTTCTTTTAACTTTCCAAAATTGTATGTTCTATCAT 143118
Query 47861 TATA-ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTG--G 47917
|| |||||| |||| | || ||||| |||| ||||||||| ||||| |||| | |
Sbjct 143117 CATTTACAAACATATTCAAAGCAATAGAAGCTAAATTACATACTGCTACTTCATCTACTG 143058
Query 47918 ATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTG 47977
|| ||||||| || |||||| | ||||||||||| |||||| || || || | |||||
Sbjct 143057 AT--GTATATTCTACTATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTT 143000
Query 47978 ATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTAT 48037
|||||| | ||||||||| || ||||| | ||| || || || || ||||| |
Sbjct 142999 CTGATTACTCTTTCTGTTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAAC 142940
Query 48038 CTGAGATTCAATGATAGATTTCCAAACA------GTCCTAGCCTTTATAACAGCTCTAGC 48091
|| | ||| | |||| ||||| | | | ||| | | | | ||| |||
Sbjct 142939 TTGTGCTTCTACAATAGCCTTCCATAAAACTTGTGCCCTTACTTGTTTGACAAATCTTTT 142880
Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTAT- 48150
|| ||| |||| | ||| || | | |||| ||| || || || | ||| | |
Sbjct 142879 TTCATTCTCATACT----TTTCATACAGAGCTTC--AAACTCTTCTCCCCA-ACAATCTG 142827
Query 48151 CTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAG 48210
| || |||||||| |||| ||||||||||| ||||| |||| |||| |||||
Sbjct 142826 CCAAACCAGGACAGTCATGGGGACACATCAAACTCCAATTTTCATTTTTTTCAACTCTTT 142767
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
||||||| | |||||||||||| | ||| ||| || ||||||| || | |||||| |
Sbjct 142766 TCATAAACAAATCTGGTATCCATAAAGCATAAAACAATTCCCTAGCTCGAACTTCTTCTT 142707
Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330
||||| ||||| |||| || || | ||| || | | ||| | |||||||||||||||||
Sbjct 142706 TGCCAGTATTCTTTTTCAGATCTAAAAACTCAAACACATCTGAATGCCATGGTTCTAAAT 142647
Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390
||| || | | | ||||| || || ||||| |||||||||| ||||||||| || |||
Sbjct 142646 ATACAGCAAATGCCCCTGGACGCTTGTTACCACCTTGATCTACATATCTGGCTGTGCTGT 142587
Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450
|||| ||||||||||||||||||| |||||||||| |||||| || || | ||| |
Sbjct 142586 TATATACTCTTAACATTGGGACAAGTCCATTTGATACACCATTTGTGCCAGCTATACATG 142527
Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510
| || ||||||| ||| || || || || |||||||| ||||||||| |
Sbjct 142526 TACCTTTAGCTCTGATACAGTGAACATGAAGCCCAATGCCACCTGCAGATTTAGATATCA 142467
Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570
||||| |||| || || ||||| ||||| || ||||| |||||| |||| ||||
Sbjct 142466 AGGCACATTGTTTCAGAGTGTCATATATTCCCTCAATACTGTCATCTTTCATGGCCAATA 142407
Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630
|||||| |||| ||| || ||| | | | |||||| || ||| || |
Sbjct 142406 AGAAACAAGATGACAATTGAGGTCTTGGAGTAGCAGCAGAAAATAAAGTAGGACTGGCGT 142347
Query 48631 GAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT 48690
|| | || | ||||| || || || ||||| || | |||| | ||||| || || |
Sbjct 142346 GAGTGAAATACTTCTCAGACAATAAGTTATAGGTGTTAATAGCTGAATCAATGTCTTCTC 142287
Query 48691 GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAA 48741
|||||| || |||| ||||||||||| ||||| ||| ||||| ||| |||
Sbjct 142286 CATGTATTCCAATAGCTACACGCATTAGCATATGTTGTGGTCTCTCAGCAA 142236
>seq409
Length=488447
Score = 134 bits (148), Expect = 2e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| ||| | |||||| || || || |||||||| ||||| | || |
Sbjct 75177 CCTCATCTCTTGATATAAGCTCATTACTGAAAGTCAAGCCAGGCATGAGTCCACGCTTCT 75236
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
||||||| || ||||||||||| || || || || ||||| ||||| |||||||| |
Sbjct 75237 TTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAATG 75296
Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162
| | | | ||||||| | | ||| || | |||||||| |||||||| || |
Sbjct 75297 CTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCAATCCATTGTAGTGCCCAGTCCG 75356
Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204
|||||||||| ||||| |||| || ||||||| ||||||||
Sbjct 75357 CCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATA 75398
Score = 113 bits (124), Expect = 5e-20
Identities = 88/104 (85%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 19445 TATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACA 19504
|| |||| |||||||| ||||||||||| |||||||| ||||| || |||||||| ||||
Sbjct 76501 TACCTTT-GATAAATCCACTTCTTCAACAGTCCAAAAGGAAGCTTCGGCTTTTTTGTACA 76559
Query 19505 TGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTA 19548
| | ||| ||||| |||| || ||||| |||||||||||||||
Sbjct 76560 TTTCCCAAATATCTGGATACTGGATAGGGAATATAACAAATCTA 76603
Score = 100 bits (110), Expect = 3e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 19234 TATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAAT 19293
|||| || || |||| | ||||||||| || |||| |||||| ||||| || || ||
Sbjct 76213 TATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTTGGAAC 76272
Query 19294 CCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTT 19353
|| || || |||| || || || | || || || |||| | || || | ||||
Sbjct 76273 CCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTAGATTT 76332
Query 19354 TCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTT 19413
||||| || ||||||||| || ||||||||||||| || ||||| || |||||| |
Sbjct 76333 TCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTTATGAAATGTCTC 76392
Query 19414 TCA 19416
|||
Sbjct 76393 TCA 76395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561825223136760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |