Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4459 205 5e-48
>seq4459
Length=154925
Score = 205 bits (226), Expect = 5e-48
Identities = 299/420 (71%), Gaps = 2/420 (0%)
Strand=Plus/Minus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||||| | ||| ||||| |||||| |||||| | | |||||| |||||||| |||
Sbjct 142806 GGACACATCAAACTCCAATTTTCATTTTTTTCAACTCTTTTCATAAACAAATCTGGTATC 142747
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|| | |||||||| || || || |||| | ||||||||| || ||||||||| |||
Sbjct 142746 CATAAAGCATAAAACAATTCCCTAGCTCGAACTTCTTCTTTGCCAGTATTCTTTTTCAGA 142687
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
||||| || ||||| | |||||| ||||||||||||||||| | |||||| |||
Sbjct 142686 TCTAAAAACTCAAACACATCTGAATGCCATGGTTCTAAATATACAGCAAATGCCCCTGGA 142627
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
| || |||||||||||||| ||||| || || || | ||| | ||||||||
Sbjct 142626 CGCTTGTTACCACCTTGATCTACATATCTGGCTGTGCTGTTATATACTCTTAACATTGGG 142567
Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAAT-CTTGGATCCTGTCGATCTAATATC 26190
|| | |||| |||| | || ||||||| | || | || | ||| | | ||| |||
Sbjct 142566 ACAAGTCCATTTGATACACCATTTGTGCCAGCTATACATGTA-CCTTTAGCTCTGATACA 142508
Query 26191 GTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGT 26250
|||| |||||| || || ||||| || |||| || || ||||| | | | ||
Sbjct 142507 GTGAACATGAAGCCCAATGCCACCTGCAGATTTAGATATCAAGGCACATTGTTTCAGAGT 142448
Query 26251 ATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310
|| | ||||| | || || ||| ||||||| | ||||| |||||||| || |||||
Sbjct 142447 GTCATATATTCCCTCAATACTGTCATCTTTCATGGCCAATAAGAAACAAGATGACAATTG 142388
Score = 122 bits (134), Expect = 4e-23
Identities = 342/515 (66%), Gaps = 10/515 (2%)
Strand=Plus/Minus
Query 24655 TTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCC 24714
||| |||| ||||||||| | || | |||| ||||| || | | ||||||||| ||
Sbjct 144010 TTTATCTACTGTAAATTGGATTGCATTTGCTGCAGGTTTTGTACGTAAATAATACATGCC 143951
Query 24715 AGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGC 24774
||||| || | | |||||| | |||||||| || || || ||||| || ||||
Sbjct 143950 TGTTTTTAAACCCATTTTCCAAGCATAAAAATGTATGGACGTCAGTTTACCATAATTTGG 143891
Query 24775 TGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGC 24834
| ||| | | || | || ||| |||| | ||| |||||| |||||
Sbjct 143890 TTCAGCTACATGAATATTAAAAGACTGACTTTGGTCTATAAATGCACCTCTATCAGCAGC 143831
Query 24835 TAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTC 24894
| | ||| | ||||||| || || || | |||| || || ||| | || ||
Sbjct 143830 CATCTGAATAGTAGTTTTCACAGAAATTTCCCATACTGTCTTATACAAATCTCTGATATC 143771
Query 24895 AGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AATA-GATTCAATCT 24951
| |||||| || ||||||| |||||||| ||||| || | |||| |||| | |
Sbjct 143770 TTTGGGAATAGTTTCAATATTCTGAACTGAACCATTATTATGAAGAATAAGATT---TTT 143714
Query 24952 CATATTCGGTGTCCAA-AGAT-TAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATG 25009
||| | | |||| | | || | || |||| |||||| | | || | ||| | |
Sbjct 143713 CATGT-CATCGTCCCATAAATCTGCTTGAGTCAA-ATCTCTTAAAAGATGATGATTAACG 143656
Query 25010 ATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAA 25069
| |||||| || || || |||| |||| ||| ||||||||||||||||||||
Sbjct 143655 ACTTGAAATTCGCCTGATAATACTCGTCTTTGGTATATATTTGAAGTGAATGGTTCAAAG 143596
Query 25070 CATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGC 25129
|||||||||| || | || |||| |||||||| |||||||| || | || ||
Sbjct 143595 GATTCATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATAGGCGCCAGTAGCAGA 143536
Query 25130 GAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164
||||| | | |||| |||| | || | || |||
Sbjct 143535 GAATTACGAATTCCATGTTTAGCTATTTTTTCTTT 143501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252915535870925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |