Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4459 205 5e-48 >seq4459 Length=154925 Score = 205 bits (226), Expect = 5e-48 Identities = 299/420 (71%), Gaps = 2/420 (0%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||||| | ||| ||||| |||||| |||||| | | |||||| |||||||| ||| Sbjct 142806 GGACACATCAAACTCCAATTTTCATTTTTTTCAACTCTTTTCATAAACAAATCTGGTATC 142747 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | |||||||| || || || |||| | ||||||||| || ||||||||| ||| Sbjct 142746 CATAAAGCATAAAACAATTCCCTAGCTCGAACTTCTTCTTTGCCAGTATTCTTTTTCAGA 142687 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 ||||| || ||||| | |||||| ||||||||||||||||| | |||||| ||| Sbjct 142686 TCTAAAAACTCAAACACATCTGAATGCCATGGTTCTAAATATACAGCAAATGCCCCTGGA 142627 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 | || |||||||||||||| ||||| || || || | ||| | |||||||| Sbjct 142626 CGCTTGTTACCACCTTGATCTACATATCTGGCTGTGCTGTTATATACTCTTAACATTGGG 142567 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAAT-CTTGGATCCTGTCGATCTAATATC 26190 || | |||| |||| | || ||||||| | || | || | ||| | | ||| ||| Sbjct 142566 ACAAGTCCATTTGATACACCATTTGTGCCAGCTATACATGTA-CCTTTAGCTCTGATACA 142508 Query 26191 GTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGT 26250 |||| |||||| || || ||||| || |||| || || ||||| | | | || Sbjct 142507 GTGAACATGAAGCCCAATGCCACCTGCAGATTTAGATATCAAGGCACATTGTTTCAGAGT 142448 Query 26251 ATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310 || | ||||| | || || ||| ||||||| | ||||| |||||||| || ||||| Sbjct 142447 GTCATATATTCCCTCAATACTGTCATCTTTCATGGCCAATAAGAAACAAGATGACAATTG 142388 Score = 122 bits (134), Expect = 4e-23 Identities = 342/515 (66%), Gaps = 10/515 (2%) Strand=Plus/Minus Query 24655 TTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCC 24714 ||| |||| ||||||||| | || | |||| ||||| || | | ||||||||| || Sbjct 144010 TTTATCTACTGTAAATTGGATTGCATTTGCTGCAGGTTTTGTACGTAAATAATACATGCC 143951 Query 24715 AGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGC 24774 ||||| || | | |||||| | |||||||| || || || ||||| || |||| Sbjct 143950 TGTTTTTAAACCCATTTTCCAAGCATAAAAATGTATGGACGTCAGTTTACCATAATTTGG 143891 Query 24775 TGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGC 24834 | ||| | | || | || ||| |||| | ||| |||||| ||||| Sbjct 143890 TTCAGCTACATGAATATTAAAAGACTGACTTTGGTCTATAAATGCACCTCTATCAGCAGC 143831 Query 24835 TAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTC 24894 | | ||| | ||||||| || || || | |||| || || ||| | || || Sbjct 143830 CATCTGAATAGTAGTTTTCACAGAAATTTCCCATACTGTCTTATACAAATCTCTGATATC 143771 Query 24895 AGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AATA-GATTCAATCT 24951 | |||||| || ||||||| |||||||| ||||| || | |||| |||| | | Sbjct 143770 TTTGGGAATAGTTTCAATATTCTGAACTGAACCATTATTATGAAGAATAAGATT---TTT 143714 Query 24952 CATATTCGGTGTCCAA-AGAT-TAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATG 25009 ||| | | |||| | | || | || |||| |||||| | | || | ||| | | Sbjct 143713 CATGT-CATCGTCCCATAAATCTGCTTGAGTCAA-ATCTCTTAAAAGATGATGATTAACG 143656 Query 25010 ATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAA 25069 | |||||| || || || |||| |||| ||| |||||||||||||||||||| Sbjct 143655 ACTTGAAATTCGCCTGATAATACTCGTCTTTGGTATATATTTGAAGTGAATGGTTCAAAG 143596 Query 25070 CATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGC 25129 |||||||||| || | || |||| |||||||| |||||||| || | || || Sbjct 143595 GATTCATTATTGCCAAGTATCTGAGCCGTAGATGCCGTTGGCATAGGCGCCAGTAGCAGA 143536 Query 25130 GAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164 ||||| | | |||| |||| | || | || ||| Sbjct 143535 GAATTACGAATTCCATGTTTAGCTATTTTTTCTTT 143501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252915535870925