Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4459 158 1e-33 >seq4459 Length=154925 Score = 158 bits (174), Expect = 1e-33 Identities = 892/1408 (63%), Gaps = 44/1408 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| | ||||| || || || || || || || |||||||||||||| | Sbjct 142247 CCACAACATATGCTAATGCGTGTAGCTATTGGAATACATGGAGAAGACATTGATTCAGCT 142306 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | | || || || |||| | | |||| |||| |||||| | || || | || Sbjct 142307 ATTAACACCTATAACTTATTGTCTGAGAAGTAT-TTCACTCACGCCAGTCCTACTTTATT 142365 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||| ||| |||||||| || |||| ||| ||| | | |||| || || || Sbjct 142366 TTCTGCTGCTACTCCAAGACCTCAATTGTCATCTTGTTTCTTATTGGCCATGAAAGATGA 142425 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| ||||| | | ||||| || || || | || || Sbjct 142426 CAGTATTGAGGGAATATATGACACTCTGAAACAATGTGCCTTGATATCTAAATCTGCAGG 142485 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAA---TAAATCTCGTATTCGGGGGAC 75507 || |||||| | || | || | | ||||| || || || |||| || || Sbjct 142486 TGGCATTGGGCTTCATGTTCACTGTATCAGAGCTAAAGGTACAT---GTATAGCTGGCAC 142542 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 ||||||| |||| |||| || | |||||| | | |||| |||| |||||| | || Sbjct 142543 AAATGGTGTATCAAATGGACTTGTCCCAATGTTAAGAGTATATAACAGCACAGCCAGATA 142602 Query 75568 TGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621 |||| |||||| || ||||| ||||| | | || || || || |||||||| Sbjct 142603 TGTAGATCAAGGTGGTAACAAGCGTCC--AGGGG-CATTTGCTGTATATTTAGAACCATG 142659 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAA----GGTGACGAAGAGG 75677 |||| | ||| | | ||||| || || | || || || || | ||||| | Sbjct 142660 GCATTCAGATGTGTTTGAGTT--TTTAGATCTGAA--AAAGAATACTGGCAAAGAAGAAG 142715 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 ||| ||| || | |||| | | ||||| ||||| | || ||||| | |||| Sbjct 142716 TTCGAGCTAGGGAATTGTTTTATGCTTTATGGATACCAGATTTGTTTATGAAAAGAGTTG 142775 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 | | || | ||| | | | ||||| | | || ||| | | || Sbjct 142776 AAAAAAATGAAAATTGGAGTTTGATGTGTCCCCATGACTGTCCTGGTTTGGCAGATTGTT 142835 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGA---GCCAATG 75854 ||| || ||||||||||| || || ||||||||| | || ||| | ||| Sbjct 142836 GGGGAGAAGAGTTTGAAGCTCTGTATGAAAAGTATGAGAATGAAAAAAGATTTGTCAAA- 142894 Query 75855 CGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 | | ||| || | | | |||||||||||| | || |||| || || || | Sbjct 142895 CAA--GTAAGGGCACAAGTTTTATGGAAGGCTATTGTAGAAGCACAAGTTGAAACAGGCA 142952 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 | |||| ||| | ||||| ||| | ||||||| |||||||| || || ||| | |||| Sbjct 142953 CTCCATTCATGTTATACAAAGATTCATGTAACAGAAAGAGTAATCAGAAAAATCTAGGAA 143012 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG--GATGAGAC 76032 |||| || | ||||| || || ||||| |||| || ||| | || ||||| Sbjct 143013 CAATTAAATGTAGTAATCTATGTACAGAAATAGTAGAATATACA--TCAGTAGATGAAGT 143070 Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCAC 76092 || || || ||||| || || || || | | || ||| ||||| || | | || Sbjct 143071 AGCAGTATGTAATTTAGCTTCTATTGCTTTGAATATGTTTGTAAATGATGATA---GAAC 143127 Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 | ||| || ||| | | ||| | ||||| || | || |||| || || | | Sbjct 143128 ATACAATTTTGGAAAGTTAAAAGAAGTTACAAAAATCATAACACAAAACCTTAATAAAAT 143187 Query 76153 CATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 || || |||| |||||| ||| ||| || ||| || ||||||||||| |||| Sbjct 143188 TATAGATGTCAATTATTATCCAGTTCCAGAA-GCTAAAAACTCCAATATGCGACATAGAC 143246 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTG 76271 | || ||| | || || |||||| | || |||| ||| | || |||||| | | || Sbjct 143247 CAATAGGTATTGGAGTCCAAGGTTTAGCTGATGCCTTTGTGCTGATGCGCTACCCTTATG 143306 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | || |||| | | | || | || ||||| || || ||| ||| | | Sbjct 143307 AAAGTGAAAAAGCATTGTTGTTAAACCAACAGATATTTGAGACTATCTATTACGGAGCTT 143366 Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391 |||| || || |||||||| || || | || ||| ||| ||| ||| || Sbjct 143367 TGGAAGCTAGCTGTGAATTAGCAGAGAAAGAGGGAGTTTATAGTTCATATGAAGGTAGTC 143426 Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTA 76449 | | ||||||| | | || |||||||||| |||| || || | | || || Sbjct 143427 CTGTTAGCCAAGGGATTTTGCAATTTGATATGT-GGAATAAGACTCCCACTGATC-TCTG 143484 Query 76450 CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509 || |||| || ||| || ||| || | | || ||||||| ||| | | Sbjct 143485 GGATTGGGTTGCTCTTAAAGAAAAAATAGCTAAACATGGAATTCGTAATTCTCTGCTACT 143544 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 ||| || |||||||| || || || || || || | || |||||||||| ||||||||| Sbjct 143545 GGCGCCTATGCCAACGGCATCTACGGCTCAGATACTTGGCAATAATGAATCCTTTGAACC 143604 Query 76570 ATACACAACAAACATCTACCTGAGAAGA 76597 || ||| |||| || |||| ||| || Sbjct 143605 ATTCACTTCAAATATATACCAAAGACGA 143632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596268638093920