Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq4182 131 2e-25
seq409 120 4e-22
seq2492 104 3e-17
seq3626 102 1e-16
>seq4182
Length=188933
Score = 131 bits (144), Expect = 2e-25
Identities = 172/237 (73%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| ||||| | ||||| | || || ||||| || || | || || || | |||
Sbjct 74499 AATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGCTTC 74440
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| |||| ||| || ||| ||||| |||||||||||||| || || || || ||
Sbjct 74439 CGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGATCA 74380
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| | ||||| | ||| ||||| ||||| |||||| | | || ||||| || || ||
Sbjct 74379 GCAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTACAA 74320
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGTAAAATT 156058
||| || ||| | ||| | ||| | ||||| || |||||||| ||| ||||||
Sbjct 74319 TATTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGGT-AAAAATT 74264
>seq409
Length=488447
Score = 120 bits (132), Expect = 4e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470
||||||||||||| || || ||||| ||||| | ||| ||||||||||| || |
Sbjct 76193 TTTCTTTGGAATCACGAATGTATGTGTCAATTAATAGAGAGTACATTTCAGAGTGAACAT 76252
Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTAT 18530
||||||||||||| || || | ||| || |||| ||||| | | ||||| |||
Sbjct 76253 TTTCCATAGCTATTTGGAACCCATAGAAGAATCTGGCCTCAGTAACTTGAACCTCTTGTG 76312
Query 18531 AAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAA 18590
|||| | || || | ||| ||||| || || || |||| | || |||||||| | ||
Sbjct 76313 AAAACCGCTCCACTAGATTTTCATTGACAATTCCATCAGATGCGGCAAAAAATGCTAGAA 76372
Query 18591 CATATTTAATGAAATGTTTTTCATTATCCTT 18621
| | ||| ||||||||| | ||| ||||||
Sbjct 76373 CGTGTTTTATGAAATGTCTCTCACAATCCTT 76403
>seq2492
Length=83244
Score = 104 bits (114), Expect = 3e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| ||||| || ||| | || || | || || ||||||||||| |||| || ||| |
Sbjct 41915 AACATGCAGATTTTTGTAAAGACCCTCACCGGCAAAACTATTACCCTAGAGGTAGAACCT 41856
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| ||| || || |||||| ||||| ||||| || || || |||||
Sbjct 41855 TCAGACACTATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGTATCCCGCCAGAC 41796
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| || || | || | ||| ||||||||||| |||||| | || | || || ||
Sbjct 41795 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGCACACTCTCTGACTAC 41736
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
||||| ||||| | || || ||||| || | ||||| ||||| ||
Sbjct 41735 AATATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41686
>seq3626
Length=201135
Score = 102 bits (112), Expect = 1e-16
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| ||||||| | || || || || ||||| |||||||| || ||
Sbjct 59292 AATGCAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATC 59351
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| |||||| || ||||| ||||| ||||||||||| ||||| || ||
Sbjct 59352 AGATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCA 59411
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977
||| | | |||| ||| || || ||||| |||||
Sbjct 59412 GCAACGGCTCATTTTTGCTGGAAAACAGCTGGAAGA 59447
Score = 100 bits (110), Expect = 4e-16
Identities = 137/190 (72%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || | |||||||| || |||||||||||||| ||| |||
Sbjct 59977 ATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACCATTACATTAGAAGTTGAACCTTCA 60036
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || ||| ||||| || || || |||||||| |||||||| |||
Sbjct 60037 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 60096
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | ||| || ||||| || |||||| |||| | || || |||||
Sbjct 60097 CAGCGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTTTCTGACTATAAC 60156
Query 156003 ATATCCAAAG 156012
|| || ||||
Sbjct 60157 AT-TCAAAAG 60165
Score = 98.7 bits (108), Expect = 1e-15
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|||||||| ||||| | || ||| | ||||||||||| || || || || || ||
Sbjct 59062 AAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCCA 59121
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| |||| ||| ||| || ||| |||||| || || |||||||| || ||||| ||
Sbjct 59122 TCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGAT 59181
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| || || | || | || || || ||||| |||||| | || | || |||||
Sbjct 59182 CAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATTAC 59241
Query 156000 AATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || || ||| || | |||||||| || || ||| | ||| |||| ||
Sbjct 59242 AACAT-TCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGG 59291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731502779724400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |