Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq4182 149 1e-30
seq3626 140 6e-28
seq409 131 3e-25
seq2492 127 4e-24
seq688 93.3 8e-14
>seq4182
Length=188933
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367
|||| ||||| | | || || | |||||| |||| ||| || ||||| || || |
Sbjct 74270 TACCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGG 74329
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
||||||| || |||| |||| ||||||||||||||||| || | || ||||| ||||
Sbjct 74330 ATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTG 74389
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || |||||||||||||| ||||| ||||||||| |||| ||| || | || |
Sbjct 74390 GAATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCA 74449
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
| || || || |||||||| || || | ||||| | ||||||||||||
Sbjct 74450 CCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCATT 74499
>seq3626
Length=201135
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| ||||| | ||| | || | ||| | |||||| || || || |||
Sbjct 59750 ATACCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCA 59691
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||||| |||| ||||||||||| ||||||||||| | || |||||| || ||
Sbjct 59690 GACAGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGA 59631
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || || || ||||| ||| ||||| || | ||||| | |||
Sbjct 59630 GGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 59571
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||||||||| || ||||| | || |||| ||| ||||||||
Sbjct 59570 ACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
Score = 138 bits (152), Expect = 2e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368
||||||| ||||||||||| || || ||||| | || ||| || || ||||| |||||
Sbjct 60203 CCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGA-ATGTTATAGTCAGA 60145
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| ||||| |||| |||| ||| || ||||||||||| | || |||||| || || ||
Sbjct 60144 AAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGG 60085
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || || || ||||| ||| ||||| || | ||||| | ||| ||
Sbjct 60084 GATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAAC 60025
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| |||||||| || ||||| | || || | ||| ||||||||
Sbjct 60024 TTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| ||||| | || | || | ||| | |||||| || || || |||
Sbjct 59978 ATACCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCA 59919
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||||| |||| |||| |||||| ||||||||||| | || |||||| || ||
Sbjct 59918 GACAGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGA 59859
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || || || |||||| ||| ||||| || | ||||| | |||
Sbjct 59858 GGGATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 59799
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | |||||| || || ||||| | || || | ||| ||||||||
Sbjct 59798 ACTTCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749
Score = 125 bits (138), Expect = 1e-23
Identities = 172/235 (73%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 192307 ATACCACCTC-TAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAAT 192364
|| ||||||| |||| |||||||| || || | |||| || ||| || || || ||||
Sbjct 59294 ATTCCACCTCGTAAG-CGTAATACCAAGTGAAGCGTAGATTCCTTTTGA-ATGTTGTAAT 59237
Query 192365 CAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAG 192424
|||| | ||| || |||| || | ||||| || || ||||| | || ||| ||||| |
Sbjct 59236 CAGAGAGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGG 59177
Query 192425 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATT 192484
| || || |||||||| || || |||||| ||||||||| || | ||| || | |
Sbjct 59176 GAGGGATACCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCT 59117
Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || | || |||||||| ||||| | ||| || | ||||||||||||||
Sbjct 59116 CAACCTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCATTTT 59062
>seq409
Length=488447
Score = 131 bits (144), Expect = 3e-25
Identities = 165/225 (73%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905
|||| || || ||||||| |||||||| ||||| || || ||||| | ||| | ||| |
Sbjct 75177 CCTCATCTCTTGATATAAGCTCATTACTGAAAGTCAAGCCAGGCATGAGTCCACGCTTCT 75236
Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965
| | |||||| || || |||||||| | || || || |||||||| ||| |||||||
Sbjct 75237 TTAACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAATG 75296
Query 49966 CTATTATTCTTGCTCCAAACAT--TAATTTATCATCTAATATCCAATTTATAGCCCAATC 50023
|||| || | | |||||||| | | ||| | | | ||||| | || ||||| ||
Sbjct 75297 CTATAATACGTTCTCCAAACGTGGCAGTTTTGCTTGCA--ATCCATTGTAGTGCCCAGTC 75354
Query 50024 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068
|| || ||||| | | |||| | | |||||||||| ||||||||
Sbjct 75355 CGCCTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAA 75399
Score = 127 bits (140), Expect = 4e-24
Identities = 145/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165
||||||| ||| ||||||||||| || ||| ||||||||||||||| || ||| ||
Sbjct 76222 ATTAATAGAGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTTGGAACCCATAGAAG 76281
Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225
||| || || | | ||||| || | || || || |||| ||| ||| |||
Sbjct 76282 AATCTGGCCTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTAGATTTTCATTGACA 76341
Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285
|| ||||||||||| || || ||||||| ||||| ||| || |||||| | ||| |||
Sbjct 76342 ATTCCATCAGATGCGGCAAAAAATGCTAGAACGTGTTTTATGAAATGTCTCTCACAATCC 76401
Query 50286 TTTAAATTTTCCCAA 50300
|||||| ||||||||
Sbjct 76402 TTTAAACTTTCCCAA 76416
>seq2492
Length=83244
Score = 127 bits (140), Expect = 4e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| | | | ||| ||||| | || | ||||| |||||| || |||
Sbjct 41683 ATTCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCA 41742
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| || |||| || | || |||||||||||||| | ||||| || || ||
Sbjct 41743 GAGAGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGC 41802
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| |||||| |||||||| |||| ||||| | ||||
Sbjct 41803 GGGATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCT 41862
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| ||||| ||||| ||||| || || | || || | ||| |||||||| ||
Sbjct 41863 ACCTCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTT 41915
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| | | | ||| ||||| | || | ||||| |||||| || |||
Sbjct 41227 ATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCA 41286
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| || |||| || | || || || |||||||| | ||||| || || |||
Sbjct 41287 GAGAGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGT 41346
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| ||||| || ||||| |||| || || | ||
Sbjct 41347 GGGATACCCTCTTTGTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCA 41406
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| |||||||||||||| ||||| || || || | ||| ||||||||
Sbjct 41407 ACTTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456
>seq688
Length=109112
Score = 93.3 bits (102), Expect = 8e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 125551 AGAAAAGGACAATCTGATGCCCATTTTTTATGATCTTCGCCTGGATCGTCGCCTTCTTTC 125610
|| || ||||| | | |||||| ||| ||||||| | | |||||||| ||||| |
Sbjct 9747 AGGAATGGACATTGGGGTGCCCACCTTTGATGATCTACAGCAGGATCGTCCCCTTCCACC 9806
Query 125611 CATTGCATTATTTCTACTTTGCAGAAAGCGCATCTTACTTCGTCACCTCTTTGAAGATAA 125670
||| ||| ||||| |||||||||||||| || | ||||| || || | |||||
Sbjct 9807 CATCTCATGATTTCGACTTTGCAGAAAGCACAGCGCACTTCATCGCCCCGGCCTAGATAG 9866
Query 125671 TAGAAACCATTTTTAGCCAACGTTTCAGGCGAAAGAAACGTTAATGGCCAATTAGTAAAT 125730
||||| || |||||||| || |||||| | | ||| | | ||||| ||| ||
Sbjct 9867 TAGAATCCGTTTTTAGCTAAGCGTTCAGGAGTGATAAATGAAACAGGCCACTTATCGAAA 9926
Query 125731 GTTTTTATTCGTTC 125744
||||| | ||| ||
Sbjct 9927 GTTTTGAGTCGCTC 9940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983970925699650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |