Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq4182 140 6e-28
seq3626 127 4e-24
seq409 127 4e-24
seq2492 109 1e-18
seq688 93.3 8e-14
>seq4182
Length=188933
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900
|||| ||||| | | || || | |||||| |||| ||| || |||||| || || |
Sbjct 74270 TACCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGG 74329
Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960
|||| | || | || |||| |||||||||||||| || || | || || || ||||
Sbjct 74330 ATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTG 74389
Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020
| || |||||||||||||| ||||| ||||||||| |||||||| || | || |
Sbjct 74390 GAATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCA 74449
Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
| || || || |||||||| || || | ||||| | |||||||||||||
Sbjct 74450 CCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCATT 74499
>seq3626
Length=201135
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||||| || || | ||| | || | ||| | |||||| ||| || || ||
Sbjct 59750 ATACCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCA 59691
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | ||| | || ||||||||||| |||||||| || | || ||||||||| ||
Sbjct 59690 GACAGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGA 59631
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || ||||| ||| ||||| || || ||||| | |||
Sbjct 59630 GGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCA 59571
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||||||||| || ||||| | || |||| || ||||||||
Sbjct 59570 ACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521
Score = 120 bits (132), Expect = 5e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||||| || || | || | || | ||| | |||||| ||| || || ||
Sbjct 59522 ATACCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCA 59463
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | ||| |||| |||| ||||| ||||||||||| | | || ||||| ||
Sbjct 59462 GAAAGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGA 59403
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| ||||| ||||| || ||||||||||| | |||
Sbjct 59402 GGGATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCT 59343
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||||| ||||| || ||||| || | ||||||| || || ||||||
Sbjct 59342 ACTTCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCATT 59292
Score = 109 bits (120), Expect = 1e-18
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 171840 ATACCACCTC-TAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898
|| ||||||| |||| |||||||| || || | |||| || || ||| || |||||
Sbjct 59294 ATTCCACCTCGTAAG-CGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATC 59236
Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958
|| | | || | || || | ||||| || || || || | || ||| || || ||
Sbjct 59235 AGAGAGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGG 59176
Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018
|| || |||||||| || || |||||| ||||||||| || ||||| || | ||
Sbjct 59175 AGGGATACCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTC 59116
Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || | || |||||||| ||||| | ||| || | |||||||||||||||
Sbjct 59115 AACCTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCATTTT 59062
>seq409
Length=488447
Score = 127 bits (140), Expect = 4e-24
Identities = 163/222 (73%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209
|| || || ||||||| |||||||| ||||| || || ||||| | ||| | ||| ||
Sbjct 75179 TCATCTCTTGATATAAGCTCATTACTGAAAGTCAAGCCAGGCATGAGTCCACGCTTCTTT 75238
Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269
| |||||| || || |||||||| | || || || |||||||| ||| |||||||||
Sbjct 75239 AACCAAAAGATAGAAGCAAAACTGCCTGAGAAAAAAATACCCTCTACAGCTGCAAATGCT 75298
Query 39270 ATTATTCTTGCTCCAAACAT-TAATTTATCATCTAAAATCCAATTTATGGCCCAATCTGC 39328
|| || | | |||||||| | | || | | | |||||| | || ||||| || ||
Sbjct 75299 ATAATACGTTCTCCAAACGTGGCAGTTTTGCT-TGCAATCCATTGTAGTGCCCAGTCCGC 75357
Query 39329 tttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370
|| ||||| | | |||| | | |||||||||| ||||||||
Sbjct 75358 CTTCTTTTTAACACAAGGCAAAGTTTCTATAGCATTAAATAA 75399
Score = 107 bits (118), Expect = 3e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475
||| ||||||||||| || ||| ||||||||||||||| || ||| || || ||
Sbjct 76230 AGAGTACATTTCAGAGTGAACATTTTCCATAGCTATTTGGAACCCATAGAAGAATCTGGC 76289
Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535
|| | | ||||| || | || || || |||| ||| ||| ||||| |||||
Sbjct 76290 CTCAGTAACTTGAACCTCTTGTGAAAACCGCTCCACTAGATTTTCATTGACAATTCCATC 76349
Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595
|||||| || || ||||||| ||| | ||| || |||||| | ||| ||| |||||| |
Sbjct 76350 AGATGCGGCAAAAAATGCTAGAACGTGTTTTATGAAATGTCTCTCACAATCCTTTAAACT 76409
Query 39596 TTCCCAA 39602
|||||||
Sbjct 76410 TTCCCAA 76416
Score = 89.7 bits (98), Expect = 9e-13
Identities = 117/158 (74%), Gaps = 12/158 (8%)
Strand=Plus/Plus
Query 38776 ATTAAAAACT-AGCATCTAAGGTAAAAATTGCATTATCACTATTCATCA--CATTGT--- 38829
||| |||||| |||||| || ||||| | ||||||| || |||| ||||
Sbjct 74160 ATTTAAAACTCAGCATCCAATGTAAACA---CATTATC-CTCAGGATCAGCCATTACTCC 74215
Query 38830 --ATTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATAT 38887
|||| ||||||||| ||||| || || |||||||| || ||||||||||| || ||
Sbjct 74216 CCATTTCTGGTATTCACCTACTTTCTTCTCAAAAAAGTTGGTCTTTCCTTCTAAAGAGAT 74275
Query 38888 TAAATTCATAAAATCAAATGGATTTTTGGTATTATAAT 38925
| |||||||| ||||||||||| || || || ||||
Sbjct 74276 GAGGTTCATAAAGTCAAATGGATTCTTCGTGTTGTAAT 74313
>seq2492
Length=83244
Score = 109 bits (120), Expect = 1e-18
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| | || | ||| ||||| | || | ||||| ||||| || ||
Sbjct 41683 ATTCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCA 41742
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || | || || | || ||||||||||| || | ||||| ||||| ||
Sbjct 41743 GAGAGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGC 41802
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| |||||| |||||||| ||||| ||||| | ||||
Sbjct 41803 GGGATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCT 41862
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| ||||| ||||| ||||| || || | || || | || |||||||| ||
Sbjct 41863 ACCTCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATGTT 41915
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| | || | ||| ||||| | || | ||||| ||||| || ||
Sbjct 41227 ATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCA 41286
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || | || || | || || || ||||| || | ||||| ||||| |||
Sbjct 41287 GAGAGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGT 41346
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| ||||| || ||||| ||||| || || | ||
Sbjct 41347 GGGATACCCTCTTTGTCTTGAATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCA 41406
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||||||||| ||||| || || || | || ||||||||
Sbjct 41407 ACTTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456
>seq688
Length=109112
Score = 93.3 bits (102), Expect = 8e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 104974 AGAAAAGGACATTTTGATGCCCATTTTTTATGATCTTCGCCTGGATCGTCGCCTTCTTTC 105033
|| || ||||||| | |||||| ||| ||||||| | | |||||||| ||||| |
Sbjct 9747 AGGAATGGACATTGGGGTGCCCACCTTTGATGATCTACAGCAGGATCGTCCCCTTCCACC 9806
Query 105034 CATTGCATTATTTCTACTTTGCAGAAAGCGCATCTTACTTCGTCACCTCTTTGAAGATAA 105093
||| ||| ||||| |||||||||||||| || | ||||| || || | |||||
Sbjct 9807 CATCTCATGATTTCGACTTTGCAGAAAGCACAGCGCACTTCATCGCCCCGGCCTAGATAG 9866
Query 105094 TAGAAACCATTTTTTGCCAACGTTTCAGGTGAAAGAAACGTCAATGGCCAATTAGTAAAT 105153
||||| || ||||| || || |||||| | | ||| | | ||||| ||| ||
Sbjct 9867 TAGAATCCGTTTTTAGCTAAGCGTTCAGGAGTGATAAATGAAACAGGCCACTTATCGAAA 9926
Query 105154 GTTTTTATTCGTTC 105167
||||| | ||| ||
Sbjct 9927 GTTTTGAGTCGCTC 9940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904679370202200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |