Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq677 150 5e-31
seq4459 120 9e-22
seq4144 89.7 2e-12
seq3391 86.0 2e-11
>seq677
Length=278688
Score = 150 bits (166), Expect = 5e-31
Identities = 312/462 (68%), Gaps = 8/462 (2%)
Strand=Plus/Minus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942
|| || ||||| ||||||||||||| ||||||||||||| | ||| |||||
Sbjct 43368 TCCAAAATATCAACTCTGTTTGTTGCAGCCAATACAACAACATTGGTGGTGGTATTAAAA 43309
Query 288943 CCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC-CTCT 289001
|||||||| || || |||||| | ||| | ||| ||| |||| | ||
Sbjct 43308 CCATCCATTTCAACTAGAAGTTGATTCAATGTGTTTTCTTGTTC------TGAATGCCCT 43255
Query 289002 TGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCAC 289061
|| ||| ||| ||||| ||||||| ||||||||||| |||||||||| |
Sbjct 43254 CCAAAGCTACGACCACCTC-TTTTTCTACCAACGGCATCAATTTCATCAATGAAAAGGAT 43196
Query 289062 ACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACC 289121
|| || | || | || || || | ||| | ||||| || | || | || | |||
Sbjct 43195 GCATGGTGCATGCTTCCTAGCCATGGAAAACATATCTCTCACTCTTGAAGGACCTACACC 43136
Query 289122 AACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCC 289181
||| ||||||||| ||||| ||| | || ||| ||||||| |||||||||||| ||
Sbjct 43135 TACAAACATTTCTAAGAATTCCGAACCTGACACTGTTATGAATGGTACATTTGCTTCTCC 43076
Query 289182 TGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCC 289241
|||| ||| | ||||| | || || || || ||||| || || |||| | ||||
Sbjct 43075 TGCTGTAGCCTTAGCCAGTAAGGTTTTGCCAGTACCAGGAGGCCCAGTCAATAAAGCTCC 43016
Query 289242 CTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAAT 289301
|| |||| |||||||| | |||| | | || | || || || | |||||
Sbjct 43015 TTTAGGTATCTTTGCCCCTAAATCAATATACTGTTGTGGATTTTTCAAGAAGTTTACAAA 42956
Query 289302 TTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
||| || |||| ||||| || ||||| || ||||||||
Sbjct 42955 CTCCATAATTTCAATCTTTGCTTCTTCACAACCAGCTACATC 42914
>seq4459
Length=154925
Score = 120 bits (132), Expect = 9e-22
Identities = 623/972 (64%), Gaps = 34/972 (3%)
Strand=Plus/Minus
Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTC 155465
|| |||||||| || ||||||||||| | ||| | ||| | |||| | | | |
Sbjct 143277 TCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTCGCATATTGGAGTTTTTAG-C 143219
Query 155466 TTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATAC 155521
|||| | ||| ||| |||| ||||| ||||| ||||| | ||| || | | |
Sbjct 143218 TTCTGGAACTGGATAATAATTGACATCTATAATTTTATTAAGGTTTTGTGTTATGATT-- 143161
Query 155522 CTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACC 155581
|| || || ||| ||| || || | | ||||| |||| |||||||||||||||
Sbjct 143160 -TTTGTAACTTCTTTTAACTTTCCAAAATTGTATGTTCTATCATCATTTACAAACATATT 143102
Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACA 155639
| | ||||||| || | ||||||||| || || | | | | | || ||||||||
Sbjct 143101 CAAAGCAATAGAAGCTAAATTACATACTGC-TACTTCATCTACT-GATGTATATTCTACT 143044
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|| || || || ||| || || || || |||| ||| ||||| ||| || |||
Sbjct 143043 ATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTTCTGATTACTCTTTCTG 142984
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT- 155758
||||| | ||| ||||||| ||| |||| || ||||| || | ||||| || | |||
Sbjct 142983 TTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAACTTGTGCTTCTACAATA 142924
Query 155759 -CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA-- 155815
| || ||| | | | || | | ||| ||| |||| ||| ||||||
Sbjct 142923 GCCTT--CCATAAAACTTGTGCCCTTACTTGTTTGACAAATCTTTTTTCATTCTCATACT 142866
Query 155816 TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATC 155875
||||||| | ||| ||| | || || || ||||||| || ||||| || | ||
Sbjct 142865 TTTCATACAGAGC-TTC-AAACTCTTCTCCCCAACAATCTGCCAAACCAGGACAGTCATG 142808
Query 155876 GGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGC 155935
||| || | || |||| ||| ||| || | | |||||| | |||
Sbjct 142807 GGGACACATCAAACTCCAATTTTCATTTTTTTCAACTCTTTTCATAAACAAATCTGGTAT 142748
Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTA 155994
||| | |||||| || | ||||| | || || || || | ||| |||||| |
Sbjct 142747 CCATAAAGCATAAAACAATTCCCTAG-CTCGAACTTCTTCTTTGCCAGTATTCTTTTTCA 142689
Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC-- 156052
| ||||| || || | ||| | ||| ||| || | ||| | |||||| ||
Sbjct 142688 GATCTAAAAACTCAAACACATCTGAATGCCATGGTTCTAAATATACAGCAAATGCCCCTG 142629
Query 156053 -ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111
| | | || ||||| ||||||||||| | || || | || | || | || ||| |
Sbjct 142628 GACGCTTGTTACCACCTTGATCTACATATCTGGCTGTGCTGTTATATACTCTTAACATTG 142569
Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC---GA- 156167
| | || ||||| || ||||| || || ||| | ||| | ||| ||
Sbjct 142568 GGACAAGTCCATTTGATACACCATTTGTGCCAGCTATACATGTACC--TTTAGCTCTGAT 142511
Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227
||| |||| ||| || ||||| ||||||| ||||||| || || |||| ||
Sbjct 142510 ACA--GTGAACATGAAGCCCAATGCCACCTGCAGATTTAGATATCAAGGCACATTGTTTC 142453
Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287
| ||| | | || || |||||| ||||||| ||| | | || | || ||
Sbjct 142452 AGAGTGTCATATATTCCCTCAATACTGTCATCTTTCATGGCCAATAAGAAACAAGATGAC 142393
Query 156288 AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTA 156347
|||||||||| ||| || |||| |||| ||||| | || ||| | ||||||||
Sbjct 142392 AATTGAGGTCTTGGAGTAGCAGCAGAAAATAAAGTAGGACTGGCGTGAGTGAAATACTTC 142333
Query 156348 TTAGACATATAA 156359
| ||||| ||||
Sbjct 142332 TCAGACA-ATAA 142322
>seq4144
Length=328530
Score = 89.7 bits (98), Expect = 2e-12
Identities = 181/269 (67%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| || | |||||| || || ||||| ||| || ||||||||||| |||
Sbjct 148607 TCCATAGCCTTAATAAGACGACGTTGGATGTAACCTGTTTCAGCAGTTTTTACAGCAGTA 148548
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
|| || ||||| |||| ||||||||||| ||||| | | ||| ||| | ||
Sbjct 148547 TCGATAAGACCTTCACGTCCACCCATAGCGTGGAAATAGAACTCGGAAGGTGTCAAACCG 148488
Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754
| | | | || | ||||| ||||| | | || || || ||| |||| | ||
Sbjct 148487 GCGAGATACGAATTTTCAACAAAACCTCTTGATTCAGGACCATAATCGTCCTTGATGAAA 148428
Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814
||||| | || || ||| | || |||| ||||| || || || ||||| || ||
Sbjct 148427 TGTGGTAAAGTTCTTTTCCGGAATCCAAATGGAATACGTTTACCTTCGACGTTTTGTTGA 148368
Query 302815 CCCAGGCACGAAATCATCTGCGAAATATT 302843
|| | || | ||| | ||| ||||| ||
Sbjct 148367 CCTACACAAGCAATAACCTGAGAAATGTT 148339
>seq3391
Length=176253
Score = 86.0 bits (94), Expect = 2e-11
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904
|| |||||||| || |||||||| ||||||||||| || || ||| | || || |||
Sbjct 33176 ATTGTCATACGGGATGGGATAGCATGAGGATTGATGATAATATCTGGTGTGAGCCCTTCA 33235
Query 251905 GCAGTGAAGGGCATATCCTTTTCCTCAATAAT-GTTTCCAATAGTTCCCTTTTGTCCGTG 251963
|| |||||||| | ||| | || || | | | ||| |||||| |||||||| ||
Sbjct 33236 CATGTAAAGGGCATGT-CTTCTTGTCTGTACTGGATACCACAAGTTCCTTTTTGTCCATG 33294
Query 251964 ACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTACA 252023
| ||| || || ||||| || |||| ||| || || | |||| |||||
Sbjct 33295 CCTAGAGGCAAATTTGTCACCGATTTGAGGAATGCGTACTGATCGGACTCGAATTTTACA 33354
Query 252024 GAAGTTGTAACCATCACCGTT 252044
||| |||||||| |||| |||
Sbjct 33355 GAATTTGTAACCTTCACTGTT 33375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471056523578983
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |