Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq677 150 5e-31 seq4459 120 9e-22 seq4144 89.7 2e-12 seq3391 86.0 2e-11 >seq677 Length=278688 Score = 150 bits (166), Expect = 5e-31 Identities = 312/462 (68%), Gaps = 8/462 (2%) Strand=Plus/Minus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942 || || ||||| ||||||||||||| ||||||||||||| | ||| ||||| Sbjct 43368 TCCAAAATATCAACTCTGTTTGTTGCAGCCAATACAACAACATTGGTGGTGGTATTAAAA 43309 Query 288943 CCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC-CTCT 289001 |||||||| || || |||||| | ||| | ||| ||| |||| | || Sbjct 43308 CCATCCATTTCAACTAGAAGTTGATTCAATGTGTTTTCTTGTTC------TGAATGCCCT 43255 Query 289002 TGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCAC 289061 || ||| ||| ||||| ||||||| ||||||||||| |||||||||| | Sbjct 43254 CCAAAGCTACGACCACCTC-TTTTTCTACCAACGGCATCAATTTCATCAATGAAAAGGAT 43196 Query 289062 ACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACC 289121 || || | || | || || || | ||| | ||||| || | || | || | ||| Sbjct 43195 GCATGGTGCATGCTTCCTAGCCATGGAAAACATATCTCTCACTCTTGAAGGACCTACACC 43136 Query 289122 AACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCC 289181 ||| ||||||||| ||||| ||| | || ||| ||||||| |||||||||||| || Sbjct 43135 TACAAACATTTCTAAGAATTCCGAACCTGACACTGTTATGAATGGTACATTTGCTTCTCC 43076 Query 289182 TGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCC 289241 |||| ||| | ||||| | || || || || ||||| || || |||| | |||| Sbjct 43075 TGCTGTAGCCTTAGCCAGTAAGGTTTTGCCAGTACCAGGAGGCCCAGTCAATAAAGCTCC 43016 Query 289242 CTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAAT 289301 || |||| |||||||| | |||| | | || | || || || | ||||| Sbjct 43015 TTTAGGTATCTTTGCCCCTAAATCAATATACTGTTGTGGATTTTTCAAGAAGTTTACAAA 42956 Query 289302 TTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 ||| || |||| ||||| || ||||| || |||||||| Sbjct 42955 CTCCATAATTTCAATCTTTGCTTCTTCACAACCAGCTACATC 42914 >seq4459 Length=154925 Score = 120 bits (132), Expect = 9e-22 Identities = 623/972 (64%), Gaps = 34/972 (3%) Strand=Plus/Minus Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTC 155465 || |||||||| || ||||||||||| | ||| | ||| | |||| | | | | Sbjct 143277 TCAGCTAAACCTTGGACTCCAATACCTATTGGTCTATGTCGCATATTGGAGTTTTTAG-C 143219 Query 155466 TTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATAC 155521 |||| | ||| ||| |||| ||||| ||||| ||||| | ||| || | | | Sbjct 143218 TTCTGGAACTGGATAATAATTGACATCTATAATTTTATTAAGGTTTTGTGTTATGATT-- 143161 Query 155522 CTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACC 155581 || || || ||| ||| || || | | ||||| |||| ||||||||||||||| Sbjct 143160 -TTTGTAACTTCTTTTAACTTTCCAAAATTGTATGTTCTATCATCATTTACAAACATATT 143102 Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACA 155639 | | ||||||| || | ||||||||| || || | | | | | || |||||||| Sbjct 143101 CAAAGCAATAGAAGCTAAATTACATACTGC-TACTTCATCTACT-GATGTATATTCTACT 143044 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 || || || || ||| || || || || |||| ||| ||||| ||| || ||| Sbjct 143043 ATTTCTGTACATAGATTACTACATTTAATTGTTCCTAGATTTTTCTGATTACTCTTTCTG 142984 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT- 155758 ||||| | ||| ||||||| ||| |||| || ||||| || | ||||| || | ||| Sbjct 142983 TTACATGAATCTTTGTATAACATGAATGGAGTGCCTGTTTCAACTTGTGCTTCTACAATA 142924 Query 155759 -CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA-- 155815 | || ||| | | | || | | ||| ||| |||| ||| |||||| Sbjct 142923 GCCTT--CCATAAAACTTGTGCCCTTACTTGTTTGACAAATCTTTTTTCATTCTCATACT 142866 Query 155816 TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATC 155875 ||||||| | ||| ||| | || || || ||||||| || ||||| || | || Sbjct 142865 TTTCATACAGAGC-TTC-AAACTCTTCTCCCCAACAATCTGCCAAACCAGGACAGTCATG 142808 Query 155876 GGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGC 155935 ||| || | || |||| ||| ||| || | | |||||| | ||| Sbjct 142807 GGGACACATCAAACTCCAATTTTCATTTTTTTCAACTCTTTTCATAAACAAATCTGGTAT 142748 Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTA 155994 ||| | |||||| || | ||||| | || || || || | ||| |||||| | Sbjct 142747 CCATAAAGCATAAAACAATTCCCTAG-CTCGAACTTCTTCTTTGCCAGTATTCTTTTTCA 142689 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC-- 156052 | ||||| || || | ||| | ||| ||| || | ||| | |||||| || Sbjct 142688 GATCTAAAAACTCAAACACATCTGAATGCCATGGTTCTAAATATACAGCAAATGCCCCTG 142629 Query 156053 -ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 | | | || ||||| ||||||||||| | || || | || | || | || ||| | Sbjct 142628 GACGCTTGTTACCACCTTGATCTACATATCTGGCTGTGCTGTTATATACTCTTAACATTG 142569 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC---GA- 156167 | | || ||||| || ||||| || || ||| | ||| | ||| || Sbjct 142568 GGACAAGTCCATTTGATACACCATTTGTGCCAGCTATACATGTACC--TTTAGCTCTGAT 142511 Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227 ||| |||| ||| || ||||| ||||||| ||||||| || || |||| || Sbjct 142510 ACA--GTGAACATGAAGCCCAATGCCACCTGCAGATTTAGATATCAAGGCACATTGTTTC 142453 Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287 | ||| | | || || |||||| ||||||| ||| | | || | || || Sbjct 142452 AGAGTGTCATATATTCCCTCAATACTGTCATCTTTCATGGCCAATAAGAAACAAGATGAC 142393 Query 156288 AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTA 156347 |||||||||| ||| || |||| |||| ||||| | || ||| | |||||||| Sbjct 142392 AATTGAGGTCTTGGAGTAGCAGCAGAAAATAAAGTAGGACTGGCGTGAGTGAAATACTTC 142333 Query 156348 TTAGACATATAA 156359 | ||||| |||| Sbjct 142332 TCAGACA-ATAA 142322 >seq4144 Length=328530 Score = 89.7 bits (98), Expect = 2e-12 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | |||||| || || ||||| ||| || ||||||||||| ||| Sbjct 148607 TCCATAGCCTTAATAAGACGACGTTGGATGTAACCTGTTTCAGCAGTTTTTACAGCAGTA 148548 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || ||||| |||| ||||||||||| ||||| | | ||| ||| | || Sbjct 148547 TCGATAAGACCTTCACGTCCACCCATAGCGTGGAAATAGAACTCGGAAGGTGTCAAACCG 148488 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754 | | | | || | ||||| ||||| | | || || || ||| |||| | || Sbjct 148487 GCGAGATACGAATTTTCAACAAAACCTCTTGATTCAGGACCATAATCGTCCTTGATGAAA 148428 Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814 ||||| | || || ||| | || |||| ||||| || || || ||||| || || Sbjct 148427 TGTGGTAAAGTTCTTTTCCGGAATCCAAATGGAATACGTTTACCTTCGACGTTTTGTTGA 148368 Query 302815 CCCAGGCACGAAATCATCTGCGAAATATT 302843 || | || | ||| | ||| ||||| || Sbjct 148367 CCTACACAAGCAATAACCTGAGAAATGTT 148339 >seq3391 Length=176253 Score = 86.0 bits (94), Expect = 2e-11 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 || |||||||| || |||||||| ||||||||||| || || ||| | || || ||| Sbjct 33176 ATTGTCATACGGGATGGGATAGCATGAGGATTGATGATAATATCTGGTGTGAGCCCTTCA 33235 Query 251905 GCAGTGAAGGGCATATCCTTTTCCTCAATAAT-GTTTCCAATAGTTCCCTTTTGTCCGTG 251963 || |||||||| | ||| | || || | | | ||| |||||| |||||||| || Sbjct 33236 CATGTAAAGGGCATGT-CTTCTTGTCTGTACTGGATACCACAAGTTCCTTTTTGTCCATG 33294 Query 251964 ACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTACA 252023 | ||| || || ||||| || |||| ||| || || | |||| ||||| Sbjct 33295 CCTAGAGGCAAATTTGTCACCGATTTGAGGAATGCGTACTGATCGGACTCGAATTTTACA 33354 Query 252024 GAAGTTGTAACCATCACCGTT 252044 ||| |||||||| |||| ||| Sbjct 33355 GAATTTGTAACCTTCACTGTT 33375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471056523578983