Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4146 187 2e-42 seq1352 167 2e-36 seq688 154 1e-32 SEQ32402 132 4e-26 seq4182 118 9e-22 seq3626 107 2e-18 SEQ23448 93.3 3e-14 >seq4146 Length=100757 Score = 187 bits (206), Expect = 2e-42 Identities = 579/889 (65%), Gaps = 23/889 (3%) Strand=Plus/Minus Query 28802 CGTCGCTGCGTATTTTGTGGAATGGAGCGTGTACGGCCGCAACTTTTCGGTGGACAAGGT 28861 ||||| || ||||||||||| ||| | || ||| | || || | || || ||||| Sbjct 16629 CGTCGGAGCTTATTTTGTGGAGTGGGGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGT 16570 Query 28862 GCCGCTGCCCAACCTCTCGCATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGG 28921 || | || || || | ||||| | ||||| || | || || || ||||| ||||| Sbjct 16569 ACCCATTCCAAATCTTACACATCTTCTTTACGGATTTATCCCCATCTGTGGCGGTGACGG 16510 Query 28922 GCTCAACGACGCCCTTAAAACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAA 28981 | |||||| | ||| || || ||||| |||| ||||| | || |||| Sbjct 16509 AATTAACGACAGTTTAAAAGAAATCGAAGGAAGTTTCCAAGCTTTGCAAAGATCTTGCAG 16450 Query 28982 CGGCCGTTCAGATTTTAAAGTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCA 29041 ||| || || || |||||| |||| || || |||||||| || |||||||||| || Sbjct 16449 CGGGCGAGAGGACTTCAAAGTTTCTATCCATGACCCTTGGGCAGCTTTACAAAAACCACA 16390 Query 29042 AAAGGGCGTGTCTGCGTGGAACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATGGCTGC 29101 ||||| |||| | |||||||| || ||||||||||| || || || || ||| || Sbjct 16389 GAAGGGTTTGTCCTCCTGGAACGAACCTTACAAAGGCAACTTTGGACAACTGATGTCTTT 16330 Query 29102 CAAGTTGGCCAATCCACACATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGA 29161 || || | || | | || |||| || || || || ||||||||| || | || Sbjct 16329 GAAACAAGCTAGACCTGATTTGAAGGTTCTTCCATCAATCGGAGGCTGGACACTGGCAGA 16270 Query 29162 CCCTTTTTATTTTATGCACGACGCGG-AGAAACGGCGCGTGTTTGTGGACTCGGTCGAGG 29220 || || || ||| | | || || | ||| | ||| ||||||| || || | | Sbjct 16269 TCCATTCTACTTTTTTGATGATAAGGTAAAAAGAGATCGT-TTTGTGGCATCAGTGAAAG 16211 Query 29221 AATTTTTGCAGGTGTGGAAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCG 29280 | || | || |||||||| || || || || |||||||| ||||| || || || | Sbjct 16210 ACTTCCTCCAAACTTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTG 16151 Query 29281 GTAAAGGCGCTAACCCGACACTTGGCAACGGGGAGC--GCGACGCCGACACGTATA---A 29335 | ||||| ||||| || | || | | ||| | |||| | | || || Sbjct 16150 GAAAAGGTGCTAATCCTAACCTCG-----GTGGACCAAATGACG--GTGAAGTTTACGTC 16098 Query 29336 CATTTTACTGAAGGAATTGCGCGCAATGCTGGA----TAAACTGCAATTGCAAACGGGTA 29391 || ||| |||| || || || | ||||||| | | | | ||| | || |||| Sbjct 16097 CAGCTTA-TGAAAGAGTTACGTGAAATGCTGAACGAGTTATCCGCA----GAGACTGGTA 16043 Query 29392 AAACGTATGAATTGACAAGCGCAATCAGCTCTGGCCACGACAAAATTGCTGTAGTGAAAT 29451 | | |||||| ||||| ||| || || |||| || ||||| ||||| | | Sbjct 16042 AGAAATATGAACTGACATCCGCTATTAGTGCTGGTTGGGATAAAATCCAAGTAGTTGACT 15983 Query 29452 ACGACGTTGTGCAAAAATTTCTTGATAAAATATTTCTAATGAGTTACGATTTTAAAGGCG 29511 || | || ||| | | ||| | || || ||||||||||||| |||||||| | Sbjct 15982 ACAGGAAAGCTCAGCAATATATGGATCATATCTTCTTAATGAGTTACGACTTTAAAGGAG 15923 Query 29512 CATGGTCAAACACCGATTTGGGATATCAAACTACACTCTACGCACCGAGTTGGAATCCCA 29571 | |||||||| | | | ||| ||||||| | | |||||||| |||||||| | Sbjct 15922 CGTGGTCAAATGACACTCTTGGACATCAAACACCGTTGTACGCACCTGCATGGAATCCAA 15863 Query 29572 ACGAGCTTTACAACACTGACCACGCCGTAAAGTCGCTCACTAACCAAGGCGTGGACCCGC 29631 | || |||| |||||| | || || ||| |||||| || |||| Sbjct 15862 AGGAAACCTACACAACTGACTTTGGAGTTAAAAACCTCTTAGCCCAAGGAGTCAACCCTA 15803 Query 29632 GCAAAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACGGGCGT 29680 || ||||| || || || || ||||| || || |||||||| || || Sbjct 15802 AGAAGATTATAGTTGGTGTAGCGATGTATGGTCGTGGTTGGACTGGAGT 15754 >seq1352 Length=124625 Score = 167 bits (184), Expect = 2e-36 Identities = 131/157 (83%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 34487 AAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGA 34546 || |||| || | || || || ||||||| |||||||||||| || ||||| ||||||| Sbjct 67182 AAGTGGCAGGCCTGCCGAGGGCTTTGGCGACTTCGGGCATGTTCACAATGACCGTCTTGA 67123 Query 34547 TGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACG 34606 ||||||||||||| || || || |||||||||||||||||||| ||||| | |||||||| Sbjct 67122 TGCCGTTGCCCTTGCCCTCCACTTTGGCGCAGATGCGCGGCATCTTGTATCTGTAGAACG 67063 Query 34607 CGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | || || ||||| ||||| |||||||| | |||||| Sbjct 67062 CATCTGCGACATTCCGGTTCACGTTCACGGACCCCAT 67026 Score = 132 bits (146), Expect = 4e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 34200 TGCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTG 34259 ||| ||||| || || |||||||| |||||||| || || ||||| ||| ||||| Sbjct 68846 TGCAGGCGGATTCTTTAGTATGAACGTGTTGAGTTTGTGGTTGAAGTCAAGCTGTCCGTG 68787 Query 34260 ATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTC 34319 || || || || ||||| ||||| | || ||||| ||| | ||||||||| || || Sbjct 68786 GTACCCACACGCCTTGCACCCCTGCGATATCGTGTTCCGTTTGGTGGACACGATCAGTTC 68727 Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 || ||||||||||| || |||||||||| ||||||||||||||||| Sbjct 68726 CGTTTCCGGGTTGTCGCACTCCGGACACAGAACAAACTTGCGGATGAA 68679 >seq688 Length=109112 Score = 154 bits (170), Expect = 1e-32 Identities = 195/267 (73%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 103645 ACCCGTACACCCCGAGTATGCAATAGAAGCTGCGCGTTTGCGCACTTTTACCGCGTGGCC 103704 ||||| |||||| |||||| |||||||| ||| | || || ||| || ||||| Sbjct 9638 ACCCGCTCACCCCCGATATGCATCCGAAGCTGCCCGTCTCCGTACATTTGTCGATTGGCC 9579 Query 103705 GCGCGGTTTGAAGCAACATCCCGAGATACTTGCCGAAGCTGGTTTCTTTTACACCGGCAA 103764 ||| || || ||| | || ||| || ||||||||||||||||| ||||| || | Sbjct 9578 TCGCAGTATGCGACAAAAGCCTGAGGAGCTAGCCGAAGCTGGTTTCTTCTACACTGGTCA 9519 Query 103765 AAGCGACAAAGTCAAATGCTTTTACTGCAACGGCGGTCTGAACAATTGGGAGCAAGATGA 103824 | | |||||| |||||||||| ||| |||| ||| |||| | ||||| | |||| Sbjct 9518 AGGAGACAAAACGAAATGCTTTTTCTGTGACGGTGGTTTGAAGGACTGGGA---AAATGA 9462 Query 103825 CGAC---CCGTGGCAACAACACGCGCTTTGGTTCGGACGCTGCGCATACGTGCTACTTGT 103881 ||| || ||| | ||||| || | |||||||| || || || ||||| | |||||| Sbjct 9461 CGATATTCCCTGGGAGCAACATGCACGTTGGTTCGATCGATGTGCCTACGTCCAACTTGT 9402 Query 103882 CAAAGGCCACGATTATGTACAAAAGGT 103908 |||||| | || |||||||||||||| Sbjct 9401 CAAAGGACGAGAGTATGTACAAAAGGT 9375 >SEQ32402 Length=1394 Score = 132 bits (146), Expect = 4e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 34200 TGCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTG 34259 ||| ||||| || || |||||||| |||||||| || || ||||| ||| ||||| Sbjct 526 TGCAGGCGGATTCTTTAGTATGAACGTGTTGAGTTTGTGGTTGAAGTCAAGCTGTCCGTG 585 Query 34260 ATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTC 34319 || || || || ||||| ||||| | || ||||| ||| | ||||||||| || || Sbjct 586 GTACCCACACGCCTTGCACCCCTGCGATATCGTGTTCCGTTTGGTGGACACGATCAGTTC 645 Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 || ||||||||||| || |||||||||| ||||||||||||||||| Sbjct 646 CGTTTCCGGGTTGTCGCACTCCGGACACAGAACAAACTTGCGGATGAA 693 >seq4182 Length=188933 Score = 118 bits (130), Expect = 9e-22 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| ||||| || ||||| | || || |||||||| ||| |||| |||| || Sbjct 74499 AATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGCTTC 74440 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||||| | | | |||||| || ||| || |||||||| | || |||||| Sbjct 74439 CGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGATCA 74380 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | || | ||| |||||||||||||| |||| | | ||| | | || ||||| Sbjct 74379 GCAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTACAA 74320 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAAAAAT 110506 ||||| || || |||||||| || | ||||| || | |||| || |||||| Sbjct 74319 TATTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGGTAAAAAT 74265 >seq3626 Length=201135 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| ||||| || || || | || || |||||||| ||| | || ||||| Sbjct 59062 AAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCCA 59121 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||| | | | |||||| || ||| ||||||||||| | || ||| Sbjct 59122 TCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGAT 59181 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || ||||||| | || || |||||||| || |||| | ||| | | |||||| Sbjct 59182 CAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATTAC 59241 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||||||||| ||||||||| | ||| |||| ||| | | ||||| |||| Sbjct 59242 AACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGAA 59293 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| |||||| | || || || || |||||| | ||| ||||| Sbjct 59292 AATGCAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATC 59351 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| ||| | ||||| ||| || |||||||||||| | || ||| || Sbjct 59352 AGATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCA 59411 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || |||| ||| || ||||||||||| || | | || | | || ||||| Sbjct 59412 GCAACGGCTCATTTTTGCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACAA 59471 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||| || || | ||| | || | | |||||||| || Sbjct 59472 CATTCAAAAAGAGTCCACTCTTCACCTTGTTCTCCGTCTGCGAGGTGG 59519 Score = 98.7 bits (108), Expect = 8e-16 Identities = 173/251 (69%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| ||| | || || || |||||||| | ||| || ||| Sbjct 59977 ATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACCATTACATTAGAAGTTGAACCTTCA 60036 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| || || ||||| |||||| | || || ||| Sbjct 60037 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 60096 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||||| | ||| || || || ||||| |||| |||| | | || || ||| Sbjct 60097 CAGCGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTTTCTGACTATAAC 60156 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGG-GGGAAAAAATAAATA 110511 |||||||| ||||| || |||||| |||| ||| | || ||||| || || || |||| Sbjct 60157 ATTCAAAAGGAATCCACTTTGCACTTGGTATTACGTCTCCGAGGTGGCAATTAAGTAATA 60216 Query 110512 AGTTTGTATTT 110522 | |||||||| Sbjct 60217 ACCTTGTATTT 60227 >SEQ23448 Length=38375 Score = 93.3 bits (102), Expect = 3e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 94126 CTGGCCCATGCGGTGGATGCGGTCCTGCGCCTGCAGCTCGATCTGCGGGTTCCAATGCGG 94185 |||||||| ||||| ||||||||||||||||||| |||||| |||||||||||| || || Sbjct 9800 CTGGCCCACGCGGTAGATGCGGTCCTGCGCCTGCTGCTCGAGCTGCGGGTTCCAGTGGGG 9741 Query 94186 CTCCAACATAATTATGTGATTGCCGCCGGTTAAATTTAATCCCACGCCGCC 94236 |||| || | | ||| ||| | ||| | || | ||||||||| || Sbjct 9740 GTCCAGCACCAGCAGGTGGTTGGCCCCGCACAGGTTCAGTCCCACGCCACC 9690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412638533408987