Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4146 132 3e-26 seq3626 127 1e-24 seq4182 104 2e-17 seq2492 100 2e-16 >seq4146 Length=100757 Score = 132 bits (146), Expect = 3e-26 Identities = 331/500 (66%), Gaps = 2/500 (0%) Strand=Plus/Plus Query 6030 AGAATTGGCACCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTT 6089 || ||| ||||| |||||||| || |||||||| || ||||| || || || ||||| || Sbjct 16134 AGGATTAGCACCTTTTCCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTT 16193 Query 6090 CCAGGTCTCCAGAAACTCGCGGACGCTTGTGACGAACACCTCACGCTTAGAGTCATCGTT 6149 ||| || | || || || || || || || || | || | ||| | Sbjct 16194 CCAAGTTTGGAGGAAGTCTTTCACTGATGCCACAAAACGATCTCTTTTTACCTTATCATC 16253 Query 6150 CATGAAATAAAACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGA 6209 | || || || ||||| || ||||| || || || ||||| || ||| |||| Sbjct 16254 AAAAAAGTAGAATGGATCTGCCAGTGTCCAGCCTCCGATTGATGGAAGAACCTTCAAATC 16313 Query 6210 GGGGTTGTGACGTTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTA 6269 || | |||| | | |||||| || |||||||| || ||||| |||||| | Sbjct 16314 AGGTCTAGCTTGTTTCAAAGACATCAGTTGTCCAAAGTTGCCTTTGTAAGGTTCGTTCCA 16373 Query 6270 CGCCTCAACACCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTT 6329 | | ||| |||||||||||||| || || ||||| ||| || ||| || || Sbjct 16374 GGAGGACAAACCCTTCTGTGGTTTTTGTAAAGCTGCCCAAGGGTCATGGATAGAAACTTT 16433 Query 6330 GAAGTCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTC-AAAGGAATTGGGAATCTGCT 6388 |||||| || || || ||| ||| | || | || | ||| | || | | | Sbjct 16434 GAAGTCCTCTCGCCCGCTGCAAGATCTTTGCAAAGCTTGGAAACTTCCTTCGATT-TCTT 16492 Query 6389 TGAGGGCGTCGTTTATGCCGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCG 6448 | | |||||| || ||| ||| ||||| || || || || ||||| || || || | Sbjct 16493 TTAAACTGTCGTTAATTCCGTCACCGCCACAGATGGGGATAAATCCGTAAAGAAGATGTG 16552 Query 6449 TCAGATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCA 6508 | ||||| || || |||||||| || | || || | ||| || || |||||||||| Sbjct 16553 TAAGATTTGGAATGGGTACCTTATCTACTGGGAATTTTCTAGGGTAAACACCCCACTCCA 16612 Query 6509 CGAAATACGCACCGACGACT 6528 | ||||| || ||||||||| Sbjct 16613 CAAAATAAGCTCCGACGACT 16632 >seq3626 Length=201135 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||||| |||||||||||||| || ||| | ||| |||| ||| Sbjct 60185 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGGGTTCGCCCATCTTCC 60126 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 ||||||||||| || ||||| ||||| || |||||| | || | || |||||||| | Sbjct 60125 AGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGG 60066 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 ||||| |||||| || || || | || | || || || | || ||||||| Sbjct 60065 ATTTTGGCTTTGAC--ATTCTCAATTGTGTCTGAAGGTTCAACTTCTAATGTAATGGTCT 60008 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || ||||| |||||||||||||| Sbjct 60007 TTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977 Score = 122 bits (134), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||||| ||| ||| || |||||||| ||||| || ||| | ||| |||| Sbjct 59733 CAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATC 59674 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||| ||||| || ||||| ||||| || |||||| | || | || |||||||| Sbjct 59673 TTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTC 59614 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| |||||| || || || | || | || || || | || ||| Sbjct 59613 CTGGATTTTGGCTTTGAC--ATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATG 59556 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || || ||||| |||||||||||||| Sbjct 59555 GTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 59521 Score = 120 bits (132), Expect = 2e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||| || |||||||| ||||| || ||| | ||| |||| Sbjct 59960 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCT 59901 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||||||| ||||| || ||||| ||||| || |||||| | || | || |||||||| Sbjct 59900 TCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCC 59841 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | || | || || || | || || | Sbjct 59840 TGGATTTTAGCTTTGAC--ATTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATAG 59783 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || || ||||| |||||||||||||| Sbjct 59782 TCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59749 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||| || |||||||| ||||| || ||| | || | || Sbjct 59504 AGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCT 59445 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || ||||| || || || || ||||||||||| | || | || || ||||| Sbjct 59444 TCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCT 59385 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || ||| | | || | || | ||| || || | ||| || ||| Sbjct 59384 TGGATTTTCGCCTTTACGTTTTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATCGTC 59325 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || || ||||| || ||||| Sbjct 59324 TTACCTGTGAGAGTTTTAACAAAAATTTGCAT 59293 >seq4182 Length=188933 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || ||||| || ||||||| || || || | || |||||||||||| || ||||| Sbjct 74269 TTACCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCG 74328 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 |||| |||| |||| ||||| || || || || ||||||| |||||||| || | Sbjct 74329 GATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGT 74388 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || || || || | ||||| ||| || | | || | || ||||| Sbjct 74389 GGAATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCC 74448 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| ||||| || ||||| ||||| ||||| || |||||||| Sbjct 74449 ACCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCAT 74498 >seq2492 Length=83244 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || ||||| ||||| |||| || | ||| || || || || || ||||| | Sbjct 41684 TTCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAG 41743 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| || || ||||| || || ||||| || | ||||||||| ||| Sbjct 41744 AGAGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGCG 41803 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | ||||| || || | | || | || | || | Sbjct 41804 GGATACCCTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATAGTGTCTGAAGGTTCTA 41863 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| || || || || ||||||||||||||||| ||||||||| Sbjct 41864 CCTCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCATG 41913 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| ||||| |||| || | ||| || || || || || |||||||| Sbjct 40774 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAG 40833 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||||||||| ||||| || | ||||||||| | || Sbjct 40834 AGTGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40893 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| ||||| | ||||| || || | | || | || | ||| || Sbjct 40894 ATACCCTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACT 40953 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || ||||| || || || | ||||||||| || |||||||| Sbjct 40954 TCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 ||| || |||||||| ||||| || | || | ||| || || || || || ||||| Sbjct 40086 ATTGCCACCCCTCAATCTCAGTACTAAATGGAGAGTGGATTCTTTTTGGATATTGTAGTC 40145 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTG 34866 |||||| |||| |||| || || ||||| ||||| ||||| || | ||||||||| | Sbjct 40146 CGATAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGG 40205 Query 34867 CGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTC 34926 || | ||||| ||||| | ||||| || || | |||| | || | ||| Sbjct 40206 TGGGATACCCTCTTTGTCTTGGATTTTAGCCTTAACATTTTCTATGGTGTCTGATGGCTC 40265 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||| || ||||| || || || | |||||| || || || ||||| Sbjct 40266 AACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATTTGCAT 40316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325532599752221