Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq688 197 1e-45
seq4182 131 1e-25
seq3626 100 2e-16
SEQ23448 91.5 1e-13
>seq688
Length=109112
Score = 197 bits (218), Expect = 1e-45
Identities = 367/531 (69%), Gaps = 12/531 (2%)
Strand=Plus/Minus
Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627
||||| |||| ||| | ||||| ||||| ||||||||||| || || |||||||| ||
Sbjct 9877 AACGGATTCTACTATCTAGGCCGGGGCGATGAAGTGCGCTGTGCTTTCTGCAAAGTCGAA 9818
Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687
|| ||| | |||| ||| || ||||| || ||| |||||||| |||||||| || ||
Sbjct 9817 ATCATGAGATGGGTGGAAGGGGACGATCCTGCTGTAGATCATCAAAGGTGGGCACCCCAA 9758
Query 103688 TGTCCGTTCCTGaaaaaaaCGGCTGCTGGCGCGCTGCCCGCCGGCCTTGCG---ATG-GA 103743
||||| ||||| || | | | |||||| |||| | || | || || ||
Sbjct 9757 TGTCCATTCCT-AAGACATCAA--GCTGGCAATGTGCC-GATGGATTCGCCTACATCTGA 9702
Query 103744 CGGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCG--TCCACCAACGCCTGCGTGCGCATG 103801
||| | ||||| || || || |||| | | || | | ||||| | | ||
Sbjct 9701 CGGCCGTGACGAATGTGGAACAAGAGCGCCGACAACTCAAGCTGCGCCTA--TCCATATT 9644
Query 103802 CCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAACTTTTAAGGAT 103861
|| | ||||| ||||| || | || ||||| || | | | | || ||| |||
Sbjct 9643 CCACGACCCGCTCACCCCCGATATGCATCCGAAGCTGCCCGTCTCCGTACATTTGTCGAT 9584
Query 103862 TGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACTACACC 103921
||||| || ||| || ||| || || ||| || | |||||||| || |||| ||||||
Sbjct 9583 TGGCCTCGCAGTATGCGACAAAAGCCTGAGGAGCTAGCCGAAGCTGGTTTCTTCTACACT 9524
Query 103922 GGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGGAGCAC 103981
|| || | ||||| ||||||||||| | ||| ||||||||| | ||||| ||||| |
Sbjct 9523 GGTCAAGGAGACAAAACGAAATGCTTTTTCTGTGACGGTGGTTTGAAGGACTGGGAAAAT 9464
Query 103982 GATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCATACGTGCTACTT 104041
|| ||| || ||| | ||||| || | || || || || || ||||| | ||||
Sbjct 9463 GACGATATTCCCTGGGAGCAACATGCACGTTGGTTCGATCGATGTGCCTACGTCCAACTT 9404
Query 104042 GTCAAGGGCCACGATTATGTACAAAAGGTCGTGACCCAATCGTGTGTTGTT 104092
||||| || | || |||||||||||||| | | || |||||| ||||
Sbjct 9403 GTCAAAGGACGAGAGTATGTACAAAAGGTTATATCGGAAGCGTGTGCTGTT 9353
>seq4182
Length=188933
Score = 131 bits (144), Expect = 1e-25
Identities = 170/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || || || ||||| | || || |||||||| ||| |||| |||||||
Sbjct 74499 AATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGCTTC 74440
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||||| | | | |||||| || ||| ||||||||||| | || ||||||
Sbjct 74439 CGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGATCA 74380
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| | | || | ||| |||||||||||||| || | | ||| | | ||||||||
Sbjct 74379 GCAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTACAA 74320
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAAT 107789
||||| |||||||||||||| || | |||||||| || |||| || || |||
Sbjct 74319 TATTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGGTAAAAAT 74265
>seq3626
Length=201135
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| |||||| | ||||| || || |||||| | ||| ||| |
Sbjct 59292 AATGCAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATC 59351
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| ||| | ||||| || || || ||||||||| | || ||| ||
Sbjct 59352 AGATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCA 59411
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| | || |||| ||| || ||||||||||| |||| || | | ||||||||
Sbjct 59412 GCAACGGCTCATTTTTGCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACAA 59471
Query 107735 CATTCAAAAGGAGTCTAC 107752
||||||||| ||||| ||
Sbjct 59472 CATTCAAAAAGAGTCCAC 59489
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||| || || || || || | || || |||||||| ||| | || ||| |
Sbjct 59062 AAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCCA 59121
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||||| | | | |||||| || ||| || |||||||| | || |||
Sbjct 59122 TCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGAT 59181
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|||||| ||||||| | || || |||||||| || || | ||| | | || |||
Sbjct 59182 CAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATTAC 59241
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|||||||||||||| |||||| | ||| |||| || | || ||||| ||||
Sbjct 59242 AACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGAA 59293
>SEQ23448
Length=38375
Score = 91.5 bits (100), Expect = 1e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 94241 TGGCCCATGCGATGAATACGGTCTTGCGCCTGCAGCTCGATCTGCGGGTTCCAGTGGGGC 94300
||||||| ||| | || ||||| ||||||||| |||||| ||||||||||||||||||
Sbjct 9799 TGGCCCACGCGGTAGATGCGGTCCTGCGCCTGCTGCTCGAGCTGCGGGTTCCAGTGGGGG 9740
Query 94301 TCCAGCATAATAATGTGATTGCCGCCGGTTAGGTTTAACCCCACGCCGCC 94350
||||||| | | ||| ||| | ||| ||||| | |||||||| ||
Sbjct 9739 TCCAGCACCAGCAGGTGGTTGGCCCCGCACAGGTTCAGTCCCACGCCACC 9690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398680602349351
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |