Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq4182 131 3e-25 seq2492 113 7e-20 seq3626 111 2e-19 >seq4182 Length=188933 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| ||||||| | || || ||||| || || | || || || | || Sbjct 74497 TGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGCTTCCG 74438 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| ||||| ||| ||||||||| |||||||| ||||| | Sbjct 74437 ATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGATCAGC 74378 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| |||||||| | || ||| | || ||| | || || |||| Sbjct 74377 AACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTACAATA 74318 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAA 146261 | || || || || || | ||| | || || | ||||||||||||||| Sbjct 74317 TTCAGAAGGAGTCTACGTTACATCTTGTGTTGAGGTTAAGAGGAGGTAAA 74268 >seq2492 Length=83244 Score = 113 bits (124), Expect = 7e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| ||| | || || ||||| || ||||| || || |||| || || | || | Sbjct 40315 TGCAAATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCA- 40257 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || ||||||| || |||||| ||| ||||| || || ||||| || || Sbjct 40256 GACACCATAGAAAATGTTAAGGCTAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 40197 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || ||||| ||||| || || || | || ||| | || || | || || ||| Sbjct 40196 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTATCGGACTACAAT 40137 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAA 146264 || ||||||||||| ||| ||||||||||| | |||| || || || || ||| Sbjct 40136 ATCCAAAAAGAATCCACTCTCCATTTAGTACTGAGATTGAGGGGTGGCAATTAA 40083 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||| || | || || ||||| ||||| | || ||||||| | | Sbjct 41911 TGCAGATTTTTGTAAAGACCCTCACCGGCAAAACTATTACCCTAGAGGTAGAACCTTCAG 41852 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| |||||||||| |||||| ||| ||||| || || || || || || | Sbjct 41851 ACACTATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGTATCCCGCCAGACCAGC 41792 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| ||||| || | || ||| | | || | | || || |||| Sbjct 41791 AGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGCACACTCTCTGACTACAATA 41732 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||||| ||| | |||| ||||| || Sbjct 41731 TCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41686 Score = 109 bits (120), Expect = 9e-19 Identities = 162/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || ||| | || || || || || ||||| || ||| |||| || || | || | Sbjct 41227 TGCAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCATCA- 41169 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || |||||| ||||||| || ||||| ||| ||||| || || ||||| || || Sbjct 41168 GACACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 41109 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || ||||| ||||| || || || | || ||| | | || | |||| || ||| Sbjct 41108 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAAT 41049 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || ||||||||||| || ||||||| ||| | |||| ||||| || Sbjct 41048 ATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41002 Score = 105 bits (116), Expect = 1e-17 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| || ||||| || ||||| || || |||| || || | | Sbjct 40999 TGCAGATTTTCGTAAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCGG 40940 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || ||||| ||| ||||| || || ||||| || || | Sbjct 40939 ACACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAGC 40880 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| ||||| || || || | || ||| | | || | | || || |||| Sbjct 40879 AGAGGCTCATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACACTCTCGGACTACAATA 40820 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||||| ||| | |||| ||||| || Sbjct 40819 TCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 40774 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || ||| |||| || || | | | Sbjct 40771 TGCAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCTTCAG 40712 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || ||||| ||| ||||| || || ||||| || || | Sbjct 40711 ACACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAGC 40652 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| ||||| || || || | || ||| | || | | || || |||| Sbjct 40651 AGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAATA 40592 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||||| ||| | |||| ||||| || Sbjct 40591 TCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 40546 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || || || || ||||| |||||| |||| || || | | Sbjct 41455 TGCAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAGCCATCGG 41396 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || ||||| ||| ||||| || || ||||| || || | Sbjct 41395 ACACTATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAGC 41336 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| ||||| || || || | || ||| | | || | | || || |||| Sbjct 41335 AGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCTCTGACTACAATA 41276 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||||| ||| | |||| ||||| || Sbjct 41275 TCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41230 >seq3626 Length=201135 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | || ||| | || |||||||| || || | || || || | | Sbjct 59066 TGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCCATCGG 59125 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||||||| |||||| || |||||||| || || |||||||| | Sbjct 59126 ATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGATCAGC 59185 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||| || || ||||| ||||| | || ||| | || | | ||||| || | Sbjct 59186 AGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATTACAACA 59245 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| || | || || |||||||| ||| |||| || Sbjct 59246 TTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGG 59291 Score = 86.0 bits (94), Expect = 1e-11 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| || | ||||| | ||||| || || ||||| | || ||||| | || | Sbjct 59294 TGCAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATCA- 59352 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 |||||||| |||| ||||| ||||| ||| ||||||||||| || || || || Sbjct 59353 GATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCAG 59412 Query 146151 CAAAGACTCATTTTTGCAGGTAAACA 146176 ||| | ||||||||||| || ||||| Sbjct 59413 CAACGGCTCATTTTTGCTGGAAAACA 59438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785769788878280