Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq4459 246 7e-60
seq4144 120 7e-22
>seq4459
Length=154925
Score = 246 bits (272), Expect = 7e-60
Identities = 529/785 (67%), Gaps = 7/785 (1%)
Strand=Plus/Plus
Query 110370 CCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAAGCTGTT 110429
|| ||||| ||| | | ||||| || ||||| || |||||| | || ||| | | | |
Sbjct 142247 CCACAACATATGCTAATGCGTGTAGCTATTGGAATACATGGAGAAGACATTGATTCAGCT 142306
Query 110430 ATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACCCTATTT 110489
||| | ||| | |||| | | ||| | | ||| || | |||||| |||||
Sbjct 142307 ATTAACACCTATAACTTATTGTCTGAGAAGTATTTCACTCACGCCAGTCCTACTTTATTT 142366
Query 110490 AACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA-ATTAACGATGA 110548
|| | ||| || |||||| | ||||| |||||| | || || || |||||
Sbjct 142367 TCTGCTGCTACTCCAAGACCTCAATTGTCATCTTG-TTTCTTATTGGCCATGAAAGATGA 142425
Query 110549 TTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGG 110608
|||||| || || ||||| |||| ||| || ||| | || |||||| | ||
Sbjct 142426 CAGTATTGAGGGAATATATGACACTCTGAAACAATGTGCCTTGATATCTAAATCTGCAGG 142485
Query 110609 AGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAA 110668
|| ||||| |||| ||||| ||| | | ||||| || ||| || | ||
Sbjct 142486 TGGCATTGGGCTTCATGTTCACTGTATCAGAGCTAAAGGTACATGTATAGCTGGCACAAA 142545
Query 110669 GGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGT 110728
|||| |||| ||||||||| |||||||||||||| | ||| ||| || | ||||||
Sbjct 142546 TGGTGTATCAAATGGACTTGTCCCAATGTTAAGAGTATATAACAGCACAGCCAGATATGT 142605
Query 110729 GAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTC 110785
||||||||||||| | | || |||||||| | ||| | ||||| ||||||||
Sbjct 142606 AGATCAAGGTGGTAACAAGCGTCCAGGGGCATTTGCTGTATATTTAGAACCATGGCATTC 142665
Query 110786 AGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACG 110845
|||| | ||||| || ||||| || || ||| || |||||| |||| |
Sbjct 142666 AGATGTGTTTGAGTTTTTAGATCTGAAAAAGAATACTGGCAAAGAAGAAGTTCGAGCTAG 142725
Query 110846 TGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905
|| || |||||||| | ||||| ||||||| || |||||| | ||| || ||||||
Sbjct 142726 GGAATTGTTTTATGCTTTATGGATACCAGATTTGTTTATGAAAAGAGTTGAAAAAAATGA 142785
Query 110906 CATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGA 110965
| ||| | | |||||||| ||| | ||||||| | | ||| | ||| ||||
Sbjct 142786 AAATTGGAGTTTGATGTGTCCCCATGACTGTCCTGGTTTGGCAGATTGTTGGGGAGAAGA 142845
Query 110966 GTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGC 111025
|||||||| || || ||||| ||||| || ||| | ||| ||||||| | ||
Sbjct 142846 GTTTGAAGCTCTGTATGAAAAGTATGAGAATGAAAAAAGATTTGTCAAACAAGTAAGGGC 142905
Query 111026 TCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTT 111085
|||| | ||| || | ||| ||||||||||||| || ||||| | || ||
Sbjct 142906 ACAAGTTTTATGGAAGGCTATTGTAGAAGCACAAGTTGAAACAGGCACTCCATTCATGTT 142965
Query 111086 GTATAAAGA-TCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTA 111144
|| ||||| |||| ||| | || |||||| | ||| ||||||||||||| | ||
Sbjct 142966 ATACAAAGATTCAT-GTAACAGAAAGAGTAATCAGAAAAATCTAGGAACAATTAAATGTA 143024
Query 111145 GTAAT 111149
|||||
Sbjct 143025 GTAAT 143029
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 112576 AAGTGACAAAAGTTATTACACGTAACCTAAATAAAATTATTGACAAAACGACCTATCCAA 112635
|||| |||||| | || |||| ||||| ||||||||||| || | ||||||
Sbjct 143151 AAGTTACAAAAATCATAACACAAAACCTTAATAAAATTATAGATGTCAATTATTATCCAG 143210
Query 112636 TTCAAAAAGCAAAACATTCTAATAACAAGCATAGACCAATTGGCATTGGCGTACAAGGAT 112695
||| | |||| ||| | || |||| ||||||||||| || ||||| || ||||| |
Sbjct 143211 TTCCAGAAGCTAAAAACTCCAATATGCGACATAGACCAATAGGTATTGGAGTCCAAGGTT 143270
Query 112696 TAGCTGATGTATTTATGATGATGCGAATTCCTTTTGATTCTGACCGTGCTAAATTCTTAA 112755
||||||||| ||| || ||||||| |||| ||| ||| || || ||||
Sbjct 143271 TAGCTGATGCCTTTGTGCTGATGCGCTACCCTTATGAAAGTGAAAAAGCATTGTTGTTAA 143330
Query 112756 ATGAAAAGATTTTCGAAACAATCTATTTCGCTGCTATG 112793
| || |||| || || || ||||||| || ||| ||
Sbjct 143331 ACCAACAGATATTTGAGACTATCTATTACGGAGCTTTG 143368
>seq4144
Length=328530
Score = 120 bits (132), Expect = 7e-22
Identities = 138/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 305307 GACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGT 305366
|||| |||| || |||||| ||| | ||||| || || || || |||| ||||||
Sbjct 147344 GACACTTGAGAGATGATGATTTAGTTATATTCAACAGACAGCCTACATTGCACAAAATGA 147403
Query 305367 CTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTG 305426
|||||||| ||| | ||| || || | || | | || |||||| | ||| |||||
Sbjct 147404 GTATGATGGGTCACAGAGTAAAGGTTCTTCCTTGGTCAACGTTTCGAATGAATTTAAGTT 147463
Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486
| | |||| ||||| || || ||||||||||||||||||||| ||||||| || ||||
Sbjct 147464 GTACTTCGCCATATAACGCTGACTTTGATGGAGATGAAATGAATTTGCATGTCCCACAAT 147523
Query 305487 CAAAGG 305492
||| ||
Sbjct 147524 CAATGG 147529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186199099471999
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |