Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2492 122 6e-23 seq3626 104 2e-17 >seq2492 Length=83244 Score = 122 bits (134), Expect = 6e-23 Identities = 173/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| | | |||||||| || ||| |||||||| || Sbjct 40762 AAAATCTGCATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATA 40821 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || ||||||||||| | || || | || ||||||||||| || | | |||| Sbjct 40822 TTGTAGTCCGAGAGTGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGC 40881 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||| |||||||| ||||| | | ||||| || | ||||| Sbjct 40882 TGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTT-GGCCTTAACATTTTCAATAGTGTC 40940 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || |||| ||||| ||||| || ||||| || ||||| || |||||||| Sbjct 40941 CGATGGCTCAACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTTACGAAAATCTGCAT 41000 Score = 122 bits (134), Expect = 6e-23 Identities = 173/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| | | |||||||| || ||| ||||| || || Sbjct 41446 AAAATCTGCATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATA 41505 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || ||||||||||| | || || | || || |||||||| || | | |||| Sbjct 41506 TTGTAGTCCGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGC 41565 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||| |||||||| |||||| | || ||||| || | |||||| Sbjct 41566 TGGTCTGGTGGGATACCCTCTTTGTCTTGAATTTT-GGCTTTAACATTTTCAATGGTGTC 41624 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || |||| ||||| ||||| || ||||| || || || || |||||||| Sbjct 41625 TGATGGCTCAACTTCAAGTGTGATGGTTTTGCCAGTTAAGGTCTTGACGAAAATCTGCAT 41684 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | | |||||||| || ||| ||||| || || ||||| || ||| Sbjct 40318 CCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAG 40377 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || || | || || |||||||| || | | |||||| ||| | || Sbjct 40378 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 40437 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| |||||||| ||||| | | ||||| || | ||||| || || || Sbjct 40438 ATACCCTCTTTGTCTTGGATTTT-GGCCTTAACATTTTCAATAGTGTCTGATGGCTCAAC 40496 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| ||||| || || || || ||||| || |||||||| Sbjct 40497 TTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 40544 Score = 107 bits (118), Expect = 1e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| | | |||||||| || ||| |||||||| || Sbjct 40990 AAAATCTGCATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATA 41049 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || ||||||||||| | || || | || || |||||||| || | | |||| Sbjct 41050 TTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGC 41109 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||| |||||||| ||||| | | ||||| || | ||||| Sbjct 41110 TGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTT-GGCCTTAACATTTTCAATAGTGTC 41168 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || |||| ||||| ||||| || || || || || || || |||||||| Sbjct 41169 TGATGGCTCAACTTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Score = 107 bits (118), Expect = 1e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| | | |||||||| || ||| |||||||| || Sbjct 41218 AAAATCTGCATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATA 41277 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || |||||||| || | || || | || || |||||||| || | | |||| Sbjct 41278 TTGTAGTCAGAGAGTGTACGACCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGC 41337 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||| |||||||| |||||| | | ||||| || | ||||| Sbjct 41338 TGGTCTGGTGGGATACCCTCTTTGTCTTGAATTTT-GGCCTTAACATTTTCAATAGTGTC 41396 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || |||| || || ||||| || || || || || ||||| |||||||| Sbjct 41397 CGATGGCTCAACTTCAAGAGTAATGGTTTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 Score = 104 bits (114), Expect = 2e-17 Identities = 169/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| | | |||||||| || ||| |||||||| || Sbjct 40534 AAAATCTGCATCCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATA 40593 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || ||||||||||| | || || | || || |||||||| || | | |||| Sbjct 40594 TTGTAGTCCGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGC 40653 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||| |||||||| ||||| | | ||||| || | ||||| Sbjct 40654 TGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTT-GGCCTTAACATTTTCAATAGTGTC 40712 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || |||| ||||| ||||| || || || || || || || |||||||| Sbjct 40713 TGAAGGCTCAACTTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 40772 Score = 98.7 bits (108), Expect = 7e-16 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| | | |||||||| || ||| |||||||| || Sbjct 41674 AAAATCTGCATTCCACCTCTCAATCTCAGTACCAAATGGAGTGTGGATTCTTTTTGGATA 41733 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || ||||||||||| | || || | || || || ||||| || | | |||| Sbjct 41734 TTGTAGTCAGAGAGTGTGCGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGC 41793 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| |||| | ||| |||||||| ||||| | | |||| || | ||||| Sbjct 41794 TGGTCTGGCGGGATACCCTCTTTGTCTTGGATTTT-AGCCTTTACATTTTCAATAGTGTC 41852 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||| || || | || || ||||| || || | || |||||||| |||||||| Sbjct 41853 TGAAGGTTCTACCTCTAGGGTAATAGTTTTGCCGGTGAGGGTCTTTACAAAAATCTGCAT 41912 >seq3626 Length=201135 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| || ||| | || | || |||||| ||||||||| |||||||| || || Sbjct 59520 ACCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGA 59461 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| |||| |||| |||||||| |||||||| | || ||||| || | || Sbjct 59460 AAGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAAAATGAGCCGTTGCTGGTCCGGAGG 59401 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| | | || | || | || || || || | Sbjct 59400 GATGCCTTCTTTGTCTTGGATTTTC-GCCTTTACGTTTTCGATAGTATCTGATGGCTCTA 59342 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || ||||| |||||||| | ||||| ||||| || ||||| Sbjct 59341 CTTCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAACAAAAATTTGCAT 59293 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| || ||| | || | || |||||| ||||||||| |||||||| || || Sbjct 59748 ACCACCTCGCAGACGCAGTACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGA 59689 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || |||||||||||||| ||||| || | ||||| || ||| | || Sbjct 59688 CAGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGG 59629 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||||| | || |||| || | ||||| | ||| | Sbjct 59628 GATGCCTTCCTTGTCCTGGATTTT-GGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAA 59570 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || | || || ||||||||||||||| Sbjct 59569 CTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCATA 59520 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| || ||||| ||||| || || || || ||||| ||||||||||| ||| Sbjct 59291 CCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAG 59232 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || || | ||||| || || || || | ||||||||||| | || Sbjct 59231 AGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGG 59172 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||||||| |||||| | || |||| || | || || || || || Sbjct 59171 ATACCTTCTTTGTCCTGAATTTT-AGCTTTTACATTTTCAATTGTATCCGATGGCTCAAC 59113 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || ||||| || || | || || || || |||||||| Sbjct 59112 CTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCAT 59065 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| || ||| | || | || |||||| ||||||||| |||||||| || || Sbjct 59976 ACCACCTCGCAGACGGAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCAGA 59917 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || |||| ||||||||| ||||| || | ||||| || ||| | || Sbjct 59916 CAGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAAGATGAGTCGCTGTTGGTCTGGAGG 59857 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||||| ||||| ||||| ||| | ||| ||| ||||| | ||| | Sbjct 59856 GATGCCTTCCTTGTCCTGGATTTTAGCTTTGA-CATTCTCAATTGTGTCTGAAGGTTCAA 59798 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || | || || ||||||||||||||| Sbjct 59797 CTTCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCATA 59748 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | |||||| ||||| || | |||| || ||||| ||||| || || || Sbjct 60203 CCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAA 60144 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| ||| ||||| ||||| || | ||||| || ||| | || Sbjct 60143 AGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGG 60084 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||||| ||| | ||| ||| ||||| | ||| || Sbjct 60083 ATGCCTTCCTTGTCCTGGATTTTGGCTTTGA-CATTCTCAATTGTGTCTGAAGGTTCAAC 60025 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || || || || | || || ||||||||||||||| Sbjct 60024 TTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCATA 59976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328542318617280