Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3626 116 9e-21 >seq3626 Length=201135 Score = 116 bits (128), Expect = 9e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || ||||| || || ||||||||||| ||| ||| ||| Sbjct 59752 CAGATCTTTGTCAAGACTCTTACTGGAAAGACTATTACTTTGGAAGTTGAACCTTCAGAC 59811 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||| || || || || ||||| || || ||| || Sbjct 59812 ACAATTGAGAATGTCAAAGCTAAA-ATCCAGGACAAGGAAGGCATCCCTCCAGACCAACA 59870 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| ||||| || ||||| || |||||||||| | || || | || |||||| | Sbjct 59871 GCGACTCATCTTTGCTGGAAAACAACTGGAAGATGGGCGAACCCTGTCTGACTACAACAT 59930 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 || |||||||| ||||||||||||||| Sbjct 59931 TCAAAAAGAGTCCACTCTTCACCTTGTT 59958 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || ||||| || || ||||||||||| ||| ||| ||| Sbjct 59524 CAGATCTTTGTTAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAACCTTCAGAC 59583 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||| || || || || ||||| || || ||| || Sbjct 59584 ACAATTGAGAATGTCAAAGCCAAA-ATCCAGGACAAGGAAGGCATCCCTCCAGACCAACA 59642 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| ||||| || ||||| || ||||||||||| | || || | || |||||| | Sbjct 59643 GCGACTCATCTTTGCTGGAAAACAATTGGAAGATGGGCGAACCCTGTCTGACTACAACAT 59702 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || |||||||| |||||||||||||| || | || ||| Sbjct 59703 TCAAAAAGAGTCCACTCTTCACCTTGTACTGCGTCTGCGA 59742 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| |||||||| || ||||| || || ||||| || || || || ||||| Sbjct 59308 AAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATCAGATACTATCGAAAAC 59367 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || ||||| |||||||| || |||||| ||| | || || || Sbjct 59368 GTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCAGCAACGGCTCATTTTT 59427 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| ||| ||||||| ||| | || | | || |||||| | || |||||||| Sbjct 59428 GCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACAACATTCAAAAAGAGTCC 59487 Query 206365 ACTCTTCACCTTGTT 206379 ||||||||||||||| Sbjct 59488 ACTCTTCACCTTGTT 59502 Score = 93.3 bits (102), Expect = 1e-13 Identities = 154/219 (70%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| |||||||| || || ||||| |||||||| || || ||||| || || Sbjct 59062 AAAATG---CAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAG 59118 Query 206224 AGTTCTGACACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 || || ||| | ||| ||||| || ||| ||||| || |||||||| || || Sbjct 59119 CCATCGGATACAATTGAAAATGTAAAAGCTAAA-ATTCAGGACAAAGAAGGTATCCCTCC 59177 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || || ||||||||||||| || || ||| | |||||||| | || | | || Sbjct 59178 CGATCAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGA 59237 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381 ||||||| | || || || ||||| |||||| | || || Sbjct 59238 TTACAACATTCAAAAGGAATCTACGCTTCACTTGGTATT 59276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181209680833639