Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3626 116 9e-21
>seq3626
Length=201135
Score = 116 bits (128), Expect = 9e-21
Identities = 152/208 (73%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| || || ||||||||||| ||| ||| |||
Sbjct 59752 CAGATCTTTGTCAAGACTCTTACTGGAAAGACTATTACTTTGGAAGTTGAACCTTCAGAC 59811
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| | || || ||||| ||| || || || || ||||| || || ||| ||
Sbjct 59812 ACAATTGAGAATGTCAAAGCTAAA-ATCCAGGACAAGGAAGGCATCCCTCCAGACCAACA 59870
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||| ||||| || ||||| || |||||||||| | || || | || |||||| |
Sbjct 59871 GCGACTCATCTTTGCTGGAAAACAACTGGAAGATGGGCGAACCCTGTCTGACTACAACAT 59930
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379
|| |||||||| |||||||||||||||
Sbjct 59931 TCAAAAAGAGTCCACTCTTCACCTTGTT 59958
Score = 114 bits (126), Expect = 3e-20
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || ||||| || || ||||||||||| ||| ||| |||
Sbjct 59524 CAGATCTTTGTTAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAACCTTCAGAC 59583
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| | || || ||||| ||| || || || || ||||| || || ||| ||
Sbjct 59584 ACAATTGAGAATGTCAAAGCCAAA-ATCCAGGACAAGGAAGGCATCCCTCCAGACCAACA 59642
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||| ||||| || ||||| || ||||||||||| | || || | || |||||| |
Sbjct 59643 GCGACTCATCTTTGCTGGAAAACAATTGGAAGATGGGCGAACCCTGTCTGACTACAACAT 59702
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
|| |||||||| |||||||||||||| || | || |||
Sbjct 59703 TCAAAAAGAGTCCACTCTTCACCTTGTACTGCGTCTGCGA 59742
Score = 113 bits (124), Expect = 1e-19
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| |||||||| || ||||| || || ||||| || || || || |||||
Sbjct 59308 AAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATCAGATACTATCGAAAAC 59367
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| || || ||||| |||||||| || |||||| ||| | || || ||
Sbjct 59368 GTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCAGCAACGGCTCATTTTT 59427
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| ||||| ||| ||||||| ||| | || | | || |||||| | || ||||||||
Sbjct 59428 GCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACAACATTCAAAAAGAGTCC 59487
Query 206365 ACTCTTCACCTTGTT 206379
|||||||||||||||
Sbjct 59488 ACTCTTCACCTTGTT 59502
Score = 93.3 bits (102), Expect = 1e-13
Identities = 154/219 (70%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| |||||||| || || ||||| |||||||| || || ||||| || ||
Sbjct 59062 AAAATG---CAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAG 59118
Query 206224 AGTTCTGACACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282
|| || ||| | ||| ||||| || ||| ||||| || |||||||| || ||
Sbjct 59119 CCATCGGATACAATTGAAAATGTAAAAGCTAAA-ATTCAGGACAAAGAAGGTATCCCTCC 59177
Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342
|| || ||||||||||||| || || ||| | |||||||| | || | | ||
Sbjct 59178 CGATCAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGA 59237
Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381
||||||| | || || || ||||| |||||| | || ||
Sbjct 59238 TTACAACATTCAAAAGGAATCTACGCTTCACTTGGTATT 59276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181209680833639
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |