Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4146 172 5e-38 seq4182 123 2e-23 seq3626 111 1e-19 seq2492 93.3 4e-14 seq2867 84.2 2e-11 >seq4146 Length=100757 Score = 172 bits (190), Expect = 5e-38 Identities = 372/554 (67%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 24778 TTTCTCGAAAATAACAAGCGTTTCGAGAAACATCCCGATAAAATTGTAGCGGCTTACTTC 24837 ||||| || || ||||||| ||| | || | | | ||| | || | ||||| || Sbjct 16673 TTTCTAGAGAAAAACAAGCCTTTTAAACAAACTTCAGGGAAAGTCGTCGGAGCTTATTTT 16614 Query 24838 GTCGAGTGGGGCGTGTATCAGCGGCAGTTTTCCGTCGACAAAGTGCCCGCGCCCAATTTG 24897 || |||||||| || || | | | || | || || || || ||| || ||| | Sbjct 16613 GTGGAGTGGGGTGTTTACCCTAGAAAATTCCCAGTAGATAAGGTACCCATTCCAAATCTT 16554 Query 24898 TCGCACTTGCTATACGCTTTCGTGCCGATATGCGGCGGCGAGGGCATAAACGACGCTCTC 24957 | || | || |||| || | || || || ||||| || || || |||||| | | Sbjct 16553 ACACATCTTCTTTACGGATTTATCCCCATCTGTGGCGGTGACGGAATTAACGACAGTTTA 16494 Query 24958 AAAACAGTTCCCGGTAGTTTTGAGGCGCTGCAGCGCTCGTGCGCCGGGCGCGACGATTTT 25017 ||| | | || ||||| | || |||| | || ||| |||||| || || || Sbjct 16493 AAAGAAATCGAAGGAAGTTTCCAAGCTTTGCAAAGATCTTGCAGCGGGCGAGAGGACTTC 16434 Query 25018 AAGGTAACCATTCACGACCCCTGGGCCGCCATCCAGAAACCGCAGAAAGGCGTCTCCACT 25077 || || | || || ||||| ||||| || | || ||||| ||||| || | ||| | Sbjct 16433 AAAGTTTCTATCCATGACCCTTGGGCAGCTTTACAAAAACCACAGAAGGGTTTGTCCTCC 16374 Query 25078 TGGAACGAGCCGTACAAAGGCAACTTTGGACAATTAATGGGCCTGAAATTAGCTAATCCA 25137 |||||||| || ||||||||||||||||||||| | ||| ||||| ||||| || Sbjct 16373 TGGAACGAACCTTACAAAGGCAACTTTGGACAACTGATGTCTTTGAAACAAGCTAGACCT 16314 Query 25138 CACTTGAAGGTGCTGGCGTCGATCGGCGGCTGGACCTTGTCAGATCCATTCTTTCACATG 25197 | |||||||| || | || ||||| |||||||| || |||||||||||| || | Sbjct 16313 GATTTGAAGGTTCTTCCATCAATCGGAGGCTGGACACTGGCAGATCCATTCT---ACTTT 16257 Query 25198 CATGACGCGACCGT-----GCGTCAAACG-TTCATCGATTCCGTCGAGGACTTTCTCTTG 25251 ||| | | || | | | || || | | || || | ||||| ||| Sbjct 16256 TTTGATGATAAGGTAAAAAGAG---ATCGTTTTGTGGCATCAGTGAAAGACTTCCTCCAA 16200 Query 25252 ACTTGGAAGTTTTTCGACGGCGTCGACATTGACTGGGAGTTTCCGGGCGGCAAAGGGGCC 25311 |||||||| || ||||| || || |||||||| |||||||| || || || ||||| || Sbjct 16199 ACTTGGAAATTCTTCGATGGTGTTGACATTGATTGGGAGTTCCCTGGTGGAAAAGGTGCT 16140 Query 25312 AATCCTCACGTCGG 25325 |||||| || |||| Sbjct 16139 AATCCTAACCTCGG 16126 >seq4182 Length=188933 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || | ||||| | ||||| || ||||| ||||||||| | || || ||| Sbjct 74286 CAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAGTCGGATAATGTGCGGCCATC 74345 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| ||||||||||| | | |||| | ||| || ||||| || || || ||||||||||| Sbjct 74346 TTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCCGGTGGAATACCTTCTTTATC 74405 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | ||| | |||||||| | |||||| |||| || | || Sbjct 74406 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCCTCCACCTCGAGGGTGATGGT 74465 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || || || ||||||| ||| |||||||| Sbjct 74466 TTTCCCCGTAAGGGTTTTTACGAATATCTGCAT 74498 >seq3626 Length=201135 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||||||||||||||| | |||||| ||||| |||||||| || | | Sbjct 59486 GACTCTTTTTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCA 59427 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || || || || || ||||| ||||||||||| || ||||| || | Sbjct 59426 AAAATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCTTGGATTTTCGCCTTTACG 59367 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||||| | ||||| ||||| | || | ||| ||||| || |||||||| Sbjct 59366 TTTTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATCGTCTTACCTGTGAGAGTTTTA 59307 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 59306 ACAAAAATTTGCAT 59293 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||||||||||||||| || ||| ||| |||||| || ||||| || | | Sbjct 59942 GACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCA 59883 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || |||||||| |||||||| |||||||| || || ||||| ||| | Sbjct 59882 AAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTAGCTTTGACA 59823 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || || ||||| | || | || || ||||| ||||| || Sbjct 59822 TTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTG 59763 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 59762 ACAAAGATCTGCAT 59749 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 || ||||| || ||||| || | | || || |||||||||||||| || | || Sbjct 59285 CGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAGAGAGTGTG 59226 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 ||| |||||| |||||||| || | |||| || ||||| ||||| ||||| || ||| Sbjct 59225 CGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAGGGATACCT 59166 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 ||||| || |||||| ||| | | ||| | ||||| | ||||| || || | Sbjct 59165 TCTTTGTCCTGAATTTTAGCTTTTACATTTTCAATTGTATCCGATGGCTCAACCTCCAAG 59106 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| ||||| || || || | ||| |||||||| Sbjct 59105 GTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCAT 59065 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||||||||||||||| || ||| ||| |||||| | ||||| || | | Sbjct 59714 GACTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCTTCCAATTGTTTTCCAGCA 59655 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || |||||||| |||||||| |||||||| || || ||||| ||| | Sbjct 59654 AAGATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACA 59595 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || || ||||| | || | || || ||||| ||||| || Sbjct 59594 TTCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTA 59535 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 59534 ACAAAGATCTGCAT 59521 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || || ||||| || | | || || ||||||||||| ||||| | ||| ||| | Sbjct 60191 CGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGGGTTCGCCCA 60132 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || || || || | | |||| || |||||||| |||||||| |||||||| || Sbjct 60131 TCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTG 60072 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| ||| | | || | || || | || || ||||| | || | Sbjct 60071 TCCTGGATTTTGGCTTTGACATTCTCAATTGTGTCTGAAGGTTCAACTTCTAATGTAATG 60012 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| ||||| || | || |||||||| Sbjct 60011 GTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977 >seq2492 Length=83244 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || |||||||| || |||||||| | ||||| |||||| Sbjct 41248 ACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCAGAGAGTGTACGACCATCTTCA 41307 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| || | ||| || ||||| || || || ||||| || | Sbjct 41308 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGA 41367 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | ||| || | ||||| ||||| | || | ||||| Sbjct 41368 ATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGAGTAATGGTTTTG 41427 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || || | ||||||||||| Sbjct 41428 CCAGTCAAGGTCTTGACAAAAATCTGCAT 41456 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGA--ATCTT 131972 |||||||| | | || |||||||| || |||||||| | | || |||| ||||| Sbjct 41020 ACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTC--TGAGAGTGTGCGACCATCTT 41077 Query 131973 CGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGG 132032 | ||||| || |||| | |||| || | ||| || ||||| || || || ||||| || Sbjct 41078 CAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTT 41137 Query 132033 TAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 ||||| || | | ||| | ||| || | ||||| ||||| | || | |||| Sbjct 41138 GGATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACTTCAAGAGTGATGGTTT 41197 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||||| || || | |||||||||||| Sbjct 41198 TGCCAGTCAAGGTCTTGACGAAAATCTGCAT 41228 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || ||||| || || |||||||| | || || |||||| Sbjct 40336 ACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAGAGTGTGCGACCATCTTCA 40395 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| || | ||| || ||||| || || || ||||| || Sbjct 40396 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 40455 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | ||| || | ||||| ||||| | || | ||||| Sbjct 40456 ATTTTGGCCTTAACATTTTCAATAGTGTCTGATGGCTCAACTTCAAGAGTGATGGTTTTG 40515 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || |||| |||||||||||| Sbjct 40516 CCAGTCAAGGTCTTTACGAAAATCTGCAT 40544 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || |||||||| || |||||||| | || || |||||| Sbjct 40564 ACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGGCCATCTTCA 40623 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| || | ||| || ||||| || || || ||||| || Sbjct 40624 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 40683 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | ||| || | ||||| ||||| | || | ||||| Sbjct 40684 ATTTTGGCCTTAACATTTTCAATAGTGTCTGAAGGCTCAACTTCAAGAGTGATGGTTTTG 40743 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || || | |||||||||||| Sbjct 40744 CCAGTCAAGGTCTTGACGAAAATCTGCAT 40772 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || |||||||| || |||||||| | || || |||||| Sbjct 40792 ACCAAATGGAGTGTGGATTCTTTTTGGATATTGTAGTCCGAGAGTGTGCGACCATCTTCA 40851 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| || | ||| || ||||| || || || ||||| || Sbjct 40852 AGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGG 40911 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | ||| || | ||||| ||||| | || | ||||| Sbjct 40912 ATTTTGGCCTTAACATTTTCAATAGTGTCCGATGGCTCAACTTCAAGTGTGATGGTTTTG 40971 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | || |||| |||||||||||| Sbjct 40972 CCAGTTAAGGTCTTTACGAAAATCTGCAT 41000 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || ||||| || || |||||||| | || || |||||| Sbjct 41476 ACCAAATGGAGTGTGGATTCTTTCTGGATATTGTAGTCCGAGAGTGTGCGGCCATCTTCA 41535 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| || | ||| || ||||| || || || ||||| || | Sbjct 41536 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGA 41595 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| ||| | | ||| | || || | ||||| ||||| | || | ||||| Sbjct 41596 ATTTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCAAGTGTGATGGTTTTG 41655 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | || || | |||||||||||| Sbjct 41656 CCAGTTAAGGTCTTGACGAAAATCTGCAT 41684 >seq2867 Length=333652 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 51727 CTTTAGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGT 51786 || ||||||| | ||||||| || || ||||| | | | |||| || ||||||| Sbjct 230842 CTGTAGCCTCAATGTTGCCCAGATCACCTACGTGTCTGACGGATGCGTCAGGGGCGCCGT 230901 Query 51787 GGTC--GCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTC 51844 | || | |||||| || |||||||| | |||||||||||||||||||| || |||| Sbjct 230902 GCTCCTGTTGCCGG--GGATTGAAGTGCGCCCCCGCCGACGTGCAGCCGTTTGTGTTGTC 230959 Query 51845 GCCGAATTCGTGCACGTGGAATCCGTG 51871 || || || || | |||||| || || Sbjct 230960 TCCAAACTCATGGATGTGGAACCCATG 230986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476370755607240