Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq688 105 5e-18
seq2492 87.8 1e-12
seq3626 84.2 2e-11
>seq688
Length=109112
Score = 105 bits (116), Expect = 5e-18
Identities = 321/484 (66%), Gaps = 23/484 (5%)
Strand=Plus/Minus
Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697
||||| || || ||| | || || | || ||||||||||| || || |||||||| |||
Sbjct 9877 AACGGATTCTACTATCTAGGCCGGGGCGATGAAGTGCGCTGTGCTTTCTGCAAAGTCGAA 9818
Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757
|| ||| | ||| |||| || ||||| || |||| ||||||| || | ||||| || |||
Sbjct 9817 ATCATGAGATGGGTGGAAGGGGACGATCCTGCTGTAGATCATCAAAGGTGGGCACCCCAA 9758
Query 99758 TGCCCGTT--TATG-CAGCAGAATCGAACGGTTGCTACGGTCATTC-----AATC--AC- 99806
|| || || || | || || | | | || | | || |||| ||| ||
Sbjct 9757 TGTCCATTCCTAAGACATCAAGCTGGCAATGTGCCGATGG--ATTCGCCTACATCTGACG 9700
Query 99807 -CAGTG-CAAAT-TGTTAGTAAA--GATGA-ATGTAAATTGTCGCGTA---AAATGTCCG 99857
| ||| | ||| || | | | | || | | || ||| || | || |
Sbjct 9699 GCCGTGACGAATGTGGAACAAGAGCGCCGACAACTCAAGCTGCGCCTATCCATATTCCAC 9640
Query 99858 GCCCCGTGCACCCTAAATACGGCACTAAATCTGCACGTTTAGAAACTTTTGTGGATTGGC 99917
| |||| ||||| ||| | | || |||| ||| | || ||||| |||||||
Sbjct 9639 GACCCGCTCACCCCCGATATGCATCCGAAGCTGCCCGTCTCCGTACATTTGTCGATTGGC 9580
Query 99918 CGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTACACCGGCA 99977
| | |||| || |||||| || ||| | | |||||||| ||||| | ||||| ||
Sbjct 9579 CTCGCAGTATGCGACAAAAGCCTGAGGAGCTAGCCGAAGCTGGTTTCTTCTACACTGGTC 9520
Query 99978 AAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAAAGCACCG 100037
|||| |||||| ||||| ||| || ||||| || | || |||||||||| ||
Sbjct 9519 AAGGAGACAAAACGAAATGCTTTTTCTGTGACGGTGGTTTGAAGGACTGGGAAAATGACG 9460
Query 100038 ACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGGCTTGT-A 100096
| || ||| | |||| ||||||||||| ||||| || | ||||| | ||||| |
Sbjct 9459 ATATTCCCTGGGAGCAACATGCACGTTGGTTCGATCGATGTGCCTACGTCCAACTTGTCA 9400
Query 100097 AAGG 100100
||||
Sbjct 9399 AAGG 9396
>seq2492
Length=83244
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 106260 aTGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| |||||||| || || ||||||||||| |||||||| | ||| || ||
Sbjct 41456 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAGCCATCG 41397
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | || || |||||| |||||||| || | || || ||
Sbjct 41396 GACACTATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAG 41337
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437
|| ||||| || | ||| ||||| || | |||||| || | ||| | | | ||||
Sbjct 41336 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCTCTG--ACTACA 41279
Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
| || ||||||||||| ||||| ||||| ||| |||| || |||| ||
Sbjct 41278 ATATCCAAAAAGAATCCACACTCCATTTGGTACTGAGATTGAGAGGTGG 41230
>seq3626
Length=201135
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/234 (68%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 106256 aaaaaTGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315
||||||||| || || || || ||| | ||||| || ||||| ||| |||| || ||
Sbjct 59061 AAAAATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCC 59120
Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375
||| | ||| | || ||| |||||| ||||||||||| | || ||
Sbjct 59121 ATCGGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGA 59180
Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGAT 106433
||| || | ||||| | || || ||||| | |||||| | | ||| | | ||
Sbjct 59181 TCAGCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTG--AT 59238
Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
|||||||| ||||| |||||||| || || || ||||| | |||||||| |||
Sbjct 59239 TACAACATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGA 59292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402131704002272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |