Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4182 132 4e-26 seq3626 100 3e-16 seq6007 87.8 2e-12 >seq4182 Length=188933 Score = 132 bits (146), Expect = 4e-26 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 || || || || | |||||||||||| | |||||||||| |||||| ||||| ||||| Sbjct 74266 TTTTTACCTCCTCTTAACCTCAACACAAGATGTAACGTAGACTCCTTCTGAATATTGTAG 74325 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 |||| || || || | || |||||||| ||||| ||||| ||||| || ||||| ||| Sbjct 74326 TCGGATAATGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGTTGCTGATCC 74385 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGA 35682 | |||| | || ||| | ||| ||| || || | | || | | || ||| | Sbjct 74386 GGTGGAATAC-CTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGC 74444 Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 |||||||| | ||||| ||||| ||||| | ||||| || |||||||||||| Sbjct 74445 CTCCACCTCGAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAATATCTGCATT 74499 >seq3626 Length=201135 Score = 100 bits (110), Expect = 3e-16 Identities = 165/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| ||||| | || ||||| || | |||| |||||||||||||||||||| | Sbjct 59293 TTCCACCTCGTAAGCGTAATACCAAGTGAAGCGTAGATTCCTTTTGAATGTTGTAATCAG 59234 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || ||| | || || ||||| || || || || || | |||||||| || | || Sbjct 59233 AGAGTGTGCGCCCATCTTCAAGCTGTTTCCCTGCGAAGATAAGTCGCTGCTGATCGGGAG 59174 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGAT--- 35683 | | | || |||||| ||| ||| || || | | || | | || || |||| Sbjct 59173 GGATACCTTCTTTGTCC-TGAATTTTAGCTTTTACATTTTCAATTGTATC---CGATGGC 59118 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || ||||||| || || ||||| || || | || ||||| |||||||||||| Sbjct 59117 TCAACCTCCAAGGTTATGGTTTTTCCAGTGAGTGTCTTCACGAATATCTGCATT 59064 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 35502 CTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 ||| ||| ||||| || | | || ||||| || || || |||||||||||||| | Sbjct 60211 CTTAATTGCCACCTCGGAGACGTAATACCAAGTGCAAAGTGGATTCCTTTTGAATGTTAT 60152 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 | || | | ||||||| | || ||||| ||||| || ||||| || | ||||| |||| Sbjct 60151 AGTCAGAAAGGGTTCGCCCATCTTCCAGTTGCTTTCCAGCAAAGATAAGTCGCTGTTGGT 60092 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTC 35680 | | ||| | || ||||||||| ||| ||| || || | | | | | ||||| Sbjct 60091 CTGGAGGGATGCCTTCCTTGTCCTGGAT-TTTGGCTTTGACATTCTCAATTGTGTCTGAA 60033 Query 35681 GATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||| || || | || || || || || || | ||| || ||||| |||||||| Sbjct 60032 GGTTCAACTTCTAATGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAGATCTGCAT 59977 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| |||||||||||||| || | || ||||||| | || ||||| || || || ||||| Sbjct 59940 CTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCTTCCAGTTGTTTTCCAGCAAA 59881 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 || | ||||| ||||| | ||| | || ||||||||| ||| ||| || || | | Sbjct 59880 GATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGAT-TTTAGCTTTGACAT 59822 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| | ||| || |||| || || || || || || | ||| || | Sbjct 59821 TCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATAGTCTTTCCAGTAAGAGTCTTGA 59762 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 59761 CAAAGATCTGCAT 59749 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| |||||||||||||| || | | ||| || |||| |||||||| || || ||||| Sbjct 59484 CTCTTTTTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCTTCCAGCTGTTTTCCAGCAAA 59425 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||| |||||||||| ||| | || || ||||| ||| || ||| | | Sbjct 59424 AATGAGCCGTTGCTGGTCCGGAGGGATGCCTTCTTTGTCTTGGATTTTCGCCTTTACGTT 59365 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || | || || || | || ||||| ||||| || | |||||| || Sbjct 59364 TTCGATAGTATCTGATGGCTCTACTTCTAAGGTAATCGTCTTACCTGTGAGAGTTTTAAC 59305 Query 35725 AAATATCTGCATTC 35738 ||| || ||||||| Sbjct 59304 AAAAATTTGCATTC 59291 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| |||||||||||||| || | || ||||||| | || |||| || || || ||||| Sbjct 59712 CTCTTTTTGAATGTTGTAGTCAGACAGGGTTCGCCCATCTTCCAATTGTTTTCCAGCAAA 59653 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 || | ||||| ||||| | ||| | || ||||||||| ||| ||| || || | | Sbjct 59652 GATGAGTCGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGAT-TTTGGCTTTGACAT 59594 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| | ||| || |||| || || || || || || | ||| || | Sbjct 59593 TCTCAATTGTGTCTGAAGGTTCAACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTAA 59534 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 59533 CAAAGATCTGCAT 59521 >seq6007 Length=121097 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 43150 AAGGAGTTGTGTATTGGATGTCGCGAGACAGCCGCATCGAAGACAACTGGGCCTTTCTAT 43209 ||||| |||| || |||||||| || ||||| || | | || || ||||| ||| ||| Sbjct 38810 AAGGAATTGTATACTGGATGTCCCGTGACAGTCGAGTTCAGGATAATTGGGCTTTTTTAT 38751 Query 43210 ACGCCCAACAGATGGCCATCGAACACAAGGTGCCCTTGCACGTCTGCTTCTGT 43262 | |||||| || |||| | || | |||| ||||||||||||||||||||| Sbjct 38750 ATGCCCAAAAGTTGGCTTTGAAAAATGAGGTTCCCTTGCACGTCTGCTTCTGT 38698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450566180263720