Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq409 109 4e-19
>seq409
Length=488447
Score = 109 bits (120), Expect = 4e-19
Identities = 154/212 (73%), Gaps = 7/212 (3%)
Strand=Plus/Minus
Query 44039 TTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAA 44098
|| |||||||| |||||||| | ||| ||||| | || || |||||||| || ||
Sbjct 75399 TTATTTAATGCTATAGAAACTTTGCCTTGTGTTAAAAAGAAGGCGGACTGGGCACTACAA 75340
Query 44099 TGGATAA-ATTCAAA--TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAA 44155
||||| | |||| || | ||||||||||| || | || ||||||| ||| ||
Sbjct 75339 TGGATTGCAAGCAAAACTGCCACGTTTGGAGAACGTATTATAGCATTTGCAGCTGTAGAG 75280
Query 44156 GGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATG 44215
|| ||||| || ||||| ||||| | || |||||||||||||| || || | |||
Sbjct 75279 GGTATTTTTTTCTCAGGCAGTTTTGCTTCTATCTTTTGGTTAAAGAAGCGTGGACTCATG 75220
Query 44216 CCTGGGTTGACGTTTTCA--AATGAGTTAATA 44245
||||| ||||| ||||| |||||| | |||
Sbjct 75219 CCTGGCTTGAC--TTTCAGTAATGAGCTTATA 75190
Score = 93.3 bits (102), Expect = 3e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909
||| | || |||||||| || || || || |||||||||||| | || ||||||
Sbjct 76373 GTTCTAGCATTTTTTGCCGCATCTGATGGAATTGTCAATGAAAATCTAGTGGAGCGGTTT 76314
Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969
| ||||| |||||| | | || || ||| || |||||||| ||||| || || |||
Sbjct 76313 TCACAAGAGGTTCAAGTTACTGAGGCCAGATTCTTCTATGGGTTCCAAATAGCTATGGAA 76254
Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013
||| |||| || ||||||||| ||| | || || || |||||
Sbjct 76253 AATGTTCACTCTGAAATGTACTCTCTATTAATTGACACATACAT 76210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397260501205795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |