Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq409 109 4e-19 >seq409 Length=488447 Score = 109 bits (120), Expect = 4e-19 Identities = 154/212 (73%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 44039 TTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAA 44098 || |||||||| |||||||| | ||| ||||| | || || |||||||| || || Sbjct 75399 TTATTTAATGCTATAGAAACTTTGCCTTGTGTTAAAAAGAAGGCGGACTGGGCACTACAA 75340 Query 44099 TGGATAA-ATTCAAA--TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAA 44155 ||||| | |||| || | ||||||||||| || | || ||||||| ||| || Sbjct 75339 TGGATTGCAAGCAAAACTGCCACGTTTGGAGAACGTATTATAGCATTTGCAGCTGTAGAG 75280 Query 44156 GGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATG 44215 || ||||| || ||||| ||||| | || |||||||||||||| || || | ||| Sbjct 75279 GGTATTTTTTTCTCAGGCAGTTTTGCTTCTATCTTTTGGTTAAAGAAGCGTGGACTCATG 75220 Query 44216 CCTGGGTTGACGTTTTCA--AATGAGTTAATA 44245 ||||| ||||| ||||| |||||| | ||| Sbjct 75219 CCTGGCTTGAC--TTTCAGTAATGAGCTTATA 75190 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909 ||| | || |||||||| || || || || |||||||||||| | || |||||| Sbjct 76373 GTTCTAGCATTTTTTGCCGCATCTGATGGAATTGTCAATGAAAATCTAGTGGAGCGGTTT 76314 Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969 | ||||| |||||| | | || || ||| || |||||||| ||||| || || ||| Sbjct 76313 TCACAAGAGGTTCAAGTTACTGAGGCCAGATTCTTCTATGGGTTCCAAATAGCTATGGAA 76254 Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 ||| |||| || ||||||||| ||| | || || || ||||| Sbjct 76253 AATGTTCACTCTGAAATGTACTCTCTATTAATTGACACATACAT 76210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397260501205795