Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10]
40,359 sequences; 808,524,533 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4459 159 4e-34
>seq4459
Length=154925
Score = 159 bits (176), Expect = 4e-34
Identities = 875/1385 (63%), Gaps = 42/1385 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
||||| | ||| | ||||| || || || || || ||||| |||||||||||||| |
Sbjct 142247 CCACAACATATGCTAATGCGTGTAGCTATTGGAATACATGGAGAAGACATTGATTCAGCT 142306
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| | || || || |||| | | |||| |||| |||||| | || || | ||
Sbjct 142307 ATTAACACCTATAACTTATTGTCTGAGAAGTAT-TTCACTCACGCCAGTCCTACTTTATT 142365
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||||| ||| |||||||| ||| |||| ||| ||| | | |||| || || ||
Sbjct 142366 TTCTGCTGCTACTCCAAGACCTCAATTGTCATCTTGTTTCTTATTGGCCATGAAAGATGA 142425
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | || || |||| ||||| | | ||||| || || || | || ||
Sbjct 142426 CAGTATTGAGGGAATATATGACACTCTGAAACAATGTGCCTTGATATCTAAATCTGCAGG 142485
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAA---TAAATCTCGTATTCGGGGGAC 104517
|| |||||| | || | || | | ||||| || || || |||| || ||
Sbjct 142486 TGGCATTGGGCTTCATGTTCACTGTATCAGAGCTAAAGGTACAT---GTATAGCTGGCAC 142542
Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577
||||||| |||| |||| || | |||||| | | |||| |||| |||||| | ||
Sbjct 142543 AAATGGTGTATCAAATGGACTTGTCCCAATGTTAAGAGTATATAACAGCACAGCCAGATA 142602
Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631
|||| |||||| ||| ||||| | || || | || || ||| | || |||||
Sbjct 142603 TGTAGATCAAGGTGGTAACAAGCGTCCAGGGGCAT---TTGCTGTATATTTAGAACCATG 142659
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691
||| | ||| | | ||||| | || || || || | || || | ||
Sbjct 142660 GCATTCAGATGTGTTTGAGTTTTTAGATCTGAAAAAGAATACTGGCAAAGAAGAAGTTCG 142719
Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751
| || | || | ||| | ||||| |||||| | || ||||| |||||||| |
Sbjct 142720 AGCTAGGGAATTGTTTTATGCTTTATGGATACCAGATTTGTTTATGAAAAGAGTTGAAAA 142779
Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811
| || |||||| | | | ||||| | | |||||| | | ||| |||
Sbjct 142780 AAATGAAAATTGGAGTTTGATGTGTCCCCATGACTGTCCTGGTTTGGCAGATTGTTGGGG 142839
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGA----GGAAGAAGGTCGGGCGACTGCGA 104867
|| ||||||||||| || || |||||| || | || ||| | | | | | |
Sbjct 142840 AGAAGAGTTTGAAGCTCTGTATGAAAAGTATGAGAATGAAAAAAGATTTGTCAA--ACAA 142897
Query 104868 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927
|| || | | | ||||| |||||| | | | ||| || || || || |
Sbjct 142898 --GTAAGGGCACAAGTTTTATGGAAGGCTATTGTAGAAGCACAAGTTGAAACAGGCACTC 142955
Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987
||| |||| | |||||||| | |||||| |||||||||||| || ||| | || |
Sbjct 142956 CATTCATGTTATACAAAGATTCATGTAACAGAAAGAGTAATCAGAAAAATCTAGGAACAA 143015
Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047
| || || ||||| ||||||||||| | |||| |||| |||||| || |
Sbjct 143016 TTAAATGTAGTAATCTATGTACAGAAATAGTAGAATATACATCAGTAGATGAAGTAGCAG 143075
Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 105107
| ||||| | || || || ||| | | || ||| || || | | ||||
Sbjct 143076 TATGTAATTTAGCTTCTATTGCTTTGAATATGTTTGTAAATGATGATAGA---ACATACA 143132
Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167
||| || ||| | | |||||||| |||| | || ||||||| || | | |||| |
Sbjct 143133 ATTTTGGAAAGTTAAAAGAAGTTACAAAAATCATAACACAAAACCTTAATAAAATTATAG 143192
Query 105168 ATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226
|| |||| ||| || ||| ||| ||| || || |||||| |||| | |||||
Sbjct 143193 ATGTCAATTATTATCCAGTTCCAGA-AGCTAAAAACTCCAATATGCGACATAGACCAATA 143251
Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286
||| | || || || ||| | || |||| || | || ||| || | | |||
Sbjct 143252 GGTATTGGAGTCCAAGGTTTAGCTGATGCCTTTGTGCTGATGCGCTACCCTTATGAAAGT 143311
Query 105287 GACGAAGCGAAG----GAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|| |||| | ||| ||| | ||||||||||| || ||| ||| ||| |
Sbjct 143312 GAAAAAGCATTGTTGTTAAACCAA----CAGATATTTGAGACTATCTATTACGGAGCTTT 143367
Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402
|| || || | || || |||||| || || ||| | | ||| ||| |||
Sbjct 143368 GGAAGCTAGCTGTGAATTAGCAGAGAAAGAGGGAGTTTATAGTTCATATGAAGGTAGTCC 143427
Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTAC 105460
| | |||||| | | ||||||||||||| |||| || || | || || ||
Sbjct 143428 TGTTAGCCAAGGGATTTTGCAATTTGATATGT-GGAATAAGACTCCCA-CTGATCTCTGG 143485
Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520
|| |||| ||||| || ||| || | | || ||||||| ||| || ||
Sbjct 143486 GATTGGGTTGCTCTTAAAGAAAAAATAGCTAAACATGGAATTCGTAATTCTCTGCTACTG 143545
Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580
|| || |||||||| || || || || || || | || |||||||||| |||||||||
Sbjct 143546 GCGCCTATGCCAACGGCATCTACGGCTCAGATACTTGGCAATAATGAATCCTTTGAACCA 143605
Query 105581 TACAC 105585
| |||
Sbjct 143606 TTCAC 143610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582966552217160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |