Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4459 159 4e-34 >seq4459 Length=154925 Score = 159 bits (176), Expect = 4e-34 Identities = 875/1385 (63%), Gaps = 42/1385 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||| | ||||| || || || || || ||||| |||||||||||||| | Sbjct 142247 CCACAACATATGCTAATGCGTGTAGCTATTGGAATACATGGAGAAGACATTGATTCAGCT 142306 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | || || || |||| | | |||| |||| |||||| | || || | || Sbjct 142307 ATTAACACCTATAACTTATTGTCTGAGAAGTAT-TTCACTCACGCCAGTCCTACTTTATT 142365 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||||| ||| |||||||| ||| |||| ||| ||| | | |||| || || || Sbjct 142366 TTCTGCTGCTACTCCAAGACCTCAATTGTCATCTTGTTTCTTATTGGCCATGAAAGATGA 142425 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | || || |||| ||||| | | ||||| || || || | || || Sbjct 142426 CAGTATTGAGGGAATATATGACACTCTGAAACAATGTGCCTTGATATCTAAATCTGCAGG 142485 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAA---TAAATCTCGTATTCGGGGGAC 104517 || |||||| | || | || | | ||||| || || || |||| || || Sbjct 142486 TGGCATTGGGCTTCATGTTCACTGTATCAGAGCTAAAGGTACAT---GTATAGCTGGCAC 142542 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 ||||||| |||| |||| || | |||||| | | |||| |||| |||||| | || Sbjct 142543 AAATGGTGTATCAAATGGACTTGTCCCAATGTTAAGAGTATATAACAGCACAGCCAGATA 142602 Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 |||| |||||| ||| ||||| | || || | || || ||| | || ||||| Sbjct 142603 TGTAGATCAAGGTGGTAACAAGCGTCCAGGGGCAT---TTGCTGTATATTTAGAACCATG 142659 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 ||| | ||| | | ||||| | || || || || | || || | || Sbjct 142660 GCATTCAGATGTGTTTGAGTTTTTAGATCTGAAAAAGAATACTGGCAAAGAAGAAGTTCG 142719 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 | || | || | ||| | ||||| |||||| | || ||||| |||||||| | Sbjct 142720 AGCTAGGGAATTGTTTTATGCTTTATGGATACCAGATTTGTTTATGAAAAGAGTTGAAAA 142779 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 | || |||||| | | | ||||| | | |||||| | | ||| ||| Sbjct 142780 AAATGAAAATTGGAGTTTGATGTGTCCCCATGACTGTCCTGGTTTGGCAGATTGTTGGGG 142839 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGA----GGAAGAAGGTCGGGCGACTGCGA 104867 || ||||||||||| || || |||||| || | || ||| | | | | | | Sbjct 142840 AGAAGAGTTTGAAGCTCTGTATGAAAAGTATGAGAATGAAAAAAGATTTGTCAA--ACAA 142897 Query 104868 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 || || | | | ||||| |||||| | | | ||| || || || || | Sbjct 142898 --GTAAGGGCACAAGTTTTATGGAAGGCTATTGTAGAAGCACAAGTTGAAACAGGCACTC 142955 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 ||| |||| | |||||||| | |||||| |||||||||||| || ||| | || | Sbjct 142956 CATTCATGTTATACAAAGATTCATGTAACAGAAAGAGTAATCAGAAAAATCTAGGAACAA 143015 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 | || || ||||| ||||||||||| | |||| |||| |||||| || | Sbjct 143016 TTAAATGTAGTAATCTATGTACAGAAATAGTAGAATATACATCAGTAGATGAAGTAGCAG 143075 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 105107 | ||||| | || || || ||| | | || ||| || || | | |||| Sbjct 143076 TATGTAATTTAGCTTCTATTGCTTTGAATATGTTTGTAAATGATGATAGA---ACATACA 143132 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 ||| || ||| | | |||||||| |||| | || ||||||| || | | |||| | Sbjct 143133 ATTTTGGAAAGTTAAAAGAAGTTACAAAAATCATAACACAAAACCTTAATAAAATTATAG 143192 Query 105168 ATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 || |||| ||| || ||| ||| ||| || || |||||| |||| | ||||| Sbjct 143193 ATGTCAATTATTATCCAGTTCCAGA-AGCTAAAAACTCCAATATGCGACATAGACCAATA 143251 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286 ||| | || || || ||| | || |||| || | || ||| || | | ||| Sbjct 143252 GGTATTGGAGTCCAAGGTTTAGCTGATGCCTTTGTGCTGATGCGCTACCCTTATGAAAGT 143311 Query 105287 GACGAAGCGAAG----GAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 || |||| | ||| ||| | ||||||||||| || ||| ||| ||| | Sbjct 143312 GAAAAAGCATTGTTGTTAAACCAA----CAGATATTTGAGACTATCTATTACGGAGCTTT 143367 Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 || || || | || || |||||| || || ||| | | ||| ||| ||| Sbjct 143368 GGAAGCTAGCTGTGAATTAGCAGAGAAAGAGGGAGTTTATAGTTCATATGAAGGTAGTCC 143427 Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTAC 105460 | | |||||| | | ||||||||||||| |||| || || | || || || Sbjct 143428 TGTTAGCCAAGGGATTTTGCAATTTGATATGT-GGAATAAGACTCCCA-CTGATCTCTGG 143485 Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 || |||| ||||| || ||| || | | || ||||||| ||| || || Sbjct 143486 GATTGGGTTGCTCTTAAAGAAAAAATAGCTAAACATGGAATTCGTAATTCTCTGCTACTG 143545 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 || || |||||||| || || || || || || | || |||||||||| ||||||||| Sbjct 143546 GCGCCTATGCCAACGGCATCTACGGCTCAGATACTTGGCAATAATGAATCCTTTGAACCA 143605 Query 105581 TACAC 105585 | ||| Sbjct 143606 TTCAC 143610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582966552217160