Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3626 176 5e-39 seq2492 170 2e-37 seq4182 116 4e-21 seq387 111 2e-19 seq5222 82.4 9e-11 >seq3626 Length=201135 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| || |||||||||||| | || ||||| | Sbjct 59749 ATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACTATTACTTTGGAAGTTGAACCTTCA 59808 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || |||||||| ||||||||||| || || ||||||||||| Sbjct 59809 GACACAATTGAGAATGTCAAAGCTAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 59868 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| || ||||| || |||| || ||||| | ||||| || Sbjct 59869 CAGCGACTCATCTTTGCTGGAAAACAACTGGAAGATGGGCGAACCCTGTCTGACTACAAC 59928 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||||||||||| || || | ||||| || ||||| Sbjct 59929 ATTCAAAAAGAGTCCACTCTTCACCTTGTTCTCCGTCTGCGAGGTGG 59975 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| || ||||| ||||| | || ||||| | Sbjct 59977 ATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACCATTACATTAGAAGTTGAACCTTCA 60036 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || ||||| ||||||||||| || || ||||||||||| Sbjct 60037 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 60096 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| |||||||| || |||| || ||||| | |||||||| Sbjct 60097 CAGCGACTTATCTTTGCTGGAAAGCAACTGGAAGATGGGCGAACCCTTTCTGACTATAAC 60156 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||||| | || | || || ||||| || ||||| Sbjct 60157 ATTCAAAAGGAATCCACTTTGCACTTGGTATTACGTCTCCGAGGTGG 60203 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| ||||| || ||||| |||||| | || ||||| | Sbjct 59521 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTTGAACCTTCA 59580 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || ||||| ||||||||||| || || ||||||||||| Sbjct 59581 GACACAATTGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 59640 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| || ||| | || |||| || ||||| | ||||| || Sbjct 59641 CAGCGACTCATCTTTGCTGGAAAACAATTGGAAGATGGGCGAACCCTGTCTGACTACAAC 59700 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||||||||||| || || ||||||| || ||||| Sbjct 59701 ATTCAAAAAGAGTCCACTCTTCACCTTGTACTGCGTCTGCGAGGTGG 59747 Score = 145 bits (160), Expect = 9e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || || || || ||||| ||||| | || || ||| || Sbjct 59292 AATGCAAATTTTTGTTAAAACTCTCACAGGTAAGACGATTACCTTAGAAGTAGAGCCATC 59351 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| || | ||| | ||||| ||||| || ||||| || || || ||||| ||||| Sbjct 59352 AGATACTATCGAAAACGTAAAGGCGAAAATCCAAGACAAAGAAGGCATCCCTCCGGACCA 59411 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| || || ||||||||||| || || || || || | |||||||| | ||||| || Sbjct 59412 GCAACGGCTCATTTTTGCTGGAAAACAGCTGGAAGACGGACGTACCCTTTCTGACTACAA 59471 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||||||||||| || || | ||||| || ||||| Sbjct 59472 CATTCAAAAAGAGTCCACTCTTCACCTTGTTCTCCGTCTGCGAGGTGG 59519 Score = 129 bits (142), Expect = 7e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| || || || || || || || | ||||||||| || Sbjct 59064 AATGCAGATATTCGTGAAGACACTCACTGGAAAAACCATAACCTTGGAGGTTGAGCCATC 59123 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| |||| | || ||||||||||||||||| || || || ||||| || || Sbjct 59124 GGATACAATTGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGTATCCCTCCCGATCA 59183 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || || || || || || || || |||| || || || | || || || Sbjct 59184 GCAGCGACTTATCTTCGCAGGGAAACAGCTTGAAGATGGGCGCACACTCTCTGATTACAA 59243 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||||||||| || ||||| | || || || | || |||||| Sbjct 59244 CATTCAAAAGGAATCTACGCTTCACTTGGTATTACGCTTACGAGGTGGA 59292 >seq2492 Length=83244 Score = 170 bits (188), Expect = 2e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || ||||| || ||||||||||| |||||| || Sbjct 41456 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAAACCATTACTCTTGAAGTTGAGCCATCG 41397 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| |||||||| ||||| ||||| || || ||||||||| Sbjct 41396 GACACTATTGAAAATGTTAAGGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAG 41337 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| |||||| || | ||||| ||| Sbjct 41336 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACACTCTCTGACTACAAT 41277 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 ||||||| |||||||| || ||| Sbjct 41276 ATCCAAAAAGAATCCACACTCCAT 41253 Score = 165 bits (182), Expect = 9e-36 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | || ||||| || || || ||||| |||||| || Sbjct 40316 ATGCAAATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCA 40257 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | |||| | ||||||||||| || ||||| ||||| || || ||||||||| Sbjct 40256 GACACCATAGAAAATGTTAAGGCTAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 40197 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || ||| | ||||| ||| Sbjct 40196 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTATCGGACTACAAT 40137 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 ||||||| ||||||||||| ||| |||| Sbjct 40136 ATCCAAAAAGAATCCACTCTCCATTTAGT 40108 Score = 165 bits (182), Expect = 9e-36 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || |||||||| |||||||| || ||||| || | Sbjct 41912 ATGCAGATTTTTGTAAAGACCCTCACCGGCAAAACTATTACCCTAGAGGTAGAACCTTCA 41853 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||||||||| || ||||| ||||| || || ||||||||| Sbjct 41852 GACACTATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAGGGTATCCCGCCAGACCAG 41793 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||||||||| || || |||| ||| || || | ||||| ||| Sbjct 41792 CAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGTCGCACACTCTCTGACTACAAT 41733 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 ||||||| |||||||| || ||| Sbjct 41732 ATCCAAAAAGAATCCACACTCCAT 41709 Score = 156 bits (172), Expect = 5e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || ||||| || || |||||||| |||||| || Sbjct 41228 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCATCA 41169 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| ||||| || ||||| ||||| || || ||||||||| Sbjct 41168 GACACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 41109 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| ||| || || ||||||| ||| Sbjct 41108 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAAT 41049 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 ||||||| |||||||| || ||| Sbjct 41048 ATCCAAAAAGAATCCACACTCCAT 41025 Score = 145 bits (160), Expect = 9e-30 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| | || ||||| || || || ||||| |||||| || Sbjct 41685 AATGCAGATTTTCGTCAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATC 41626 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| |||| | || || |||||||| ||||| ||||| || || |||||||| Sbjct 41625 AGACACCATTGAAAATGTTAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCAGACCA 41566 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 41565 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAA 41506 Query 27585 TGTCCAAAAGGAATCCACTCTTCAT 27609 | |||| || |||||||| || ||| Sbjct 41505 TATCCAGAAAGAATCCACACTCCAT 41481 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || ||||| || || |||||||| |||||| || Sbjct 40544 ATGCAGATTTTCGTAAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCATCA 40485 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| ||||| || ||||| ||||| || || ||||||||| Sbjct 40484 GACACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 40425 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| ||| || || | ||||| ||| Sbjct 40424 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCGGACTACAAT 40365 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 |||| || |||||||| || ||| Sbjct 40364 ATCCAGAAAGAATCCACACTCCAT 40341 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || ||||| || || |||||||| |||||| | Sbjct 40772 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAAACCATCACTCTTGAAGTTGAGCCTTCA 40713 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| ||||| || ||||| ||||| || || ||||||||| Sbjct 40712 GACACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 40653 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | ||||| ||| Sbjct 40652 CAGAGGCTCATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCGGACTACAAT 40593 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 ||||||| |||||||| || ||| Sbjct 40592 ATCCAAAAAGAATCCACACTCCAT 40569 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || ||||| || || || ||||| |||||| || Sbjct 41000 ATGCAGATTTTCGTAAAGACCTTAACTGGCAAAACCATCACACTTGAAGTTGAGCCATCG 40941 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| ||||| || ||||| ||||| || || ||||||||| Sbjct 40940 GACACTATTGAAAATGTTAAGGCCAAAATCCAAGACAAAGAGGGTATCCCACCAGACCAG 40881 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| ||| || || | ||||| ||| Sbjct 40880 CAGAGGCTCATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACACTCTCGGACTACAAT 40821 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 ||||||| |||||||| || ||| Sbjct 40820 ATCCAAAAAGAATCCACACTCCAT 40797 >seq4182 Length=188933 Score = 116 bits (128), Expect = 4e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || ||||| || || || || || || ||||| ||| | Sbjct 74499 AATGCAGATATTCGTAAAAACCCTTACGGGGAAAACCATCACCCTCGAGGTGGAGGCTTC 74440 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| |||| | || || |||||||| || || || || ||||| || || || Sbjct 74439 CGATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCGGATCA 74380 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||| | || ||||||||||| || || || |||| || || || | ||||| || Sbjct 74379 GCAACGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACATTATCCGACTACAA 74320 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | | || ||||| || || | ||||| || ||| Sbjct 74319 TATTCAGAAGGAGTCTACGTTACATCTTGTGTTG 74286 >seq387 Length=840652 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| ||||| |||||||| || ||||||||||| || | Sbjct 551421 AATGCAGATCTTTGTGAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAACCCTC 551480 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | || ||||| ||||| || ||||||||||| |||||||| || Sbjct 551481 GGACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAGGGAATCCCTCCAGATCA 551540 Query 27525 GCAG 27528 |||| Sbjct 551541 GCAG 551544 >seq5222 Length=193659 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||||| || |||| | || || ||||| ||||||||| | || || ||||||||||| Sbjct 129998 GATAGATTTAAAAATGTTAAAGCCAAAATCCAGGACAAGCAAGGCATCCCTCCAGACCAA 130057 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||| || | ||| |||| |||||||| || |||| ||||| | |||||| Sbjct 130058 CAGCGACTTAACTTTCCTGGAAAGCAACTGGAAGATGGACGTACTATGTCAGACT 130112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570022685532080